| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pyrG [H]
Identifier: 66044609
GI number: 66044609
Start: 1544354
End: 1545985
Strand: Direct
Name: pyrG [H]
Synonym: Psyr_1361
Alternate gene names: 66044609
Gene position: 1544354-1545985 (Clockwise)
Preceding gene: 66044608
Following gene: 66044610
Centisome position: 25.34
GC content: 60.11
Gene sequence:
>1632_bases ATGACGCGCTACATCTTCGTCACGGGCGGTGTTGTTTCTTCATTGGGGAAAGGCATTGCCTCGGCTTCATTGGCGGCCAT CCTGGAGGCGCGGGGACTCAAGGTCACCATGCTCAAACTGGATCCCTACATCAACGTGGACCCAGGCACCATGAGCCCGT TCCAGCACGGTGAGGTGTTCGTCACTCACGACGGCGCCGAGACCGACCTGGACCTTGGTCACTATGAGCGGTTCATCCGC ACCACCATGACCCAGAACAACAACTTCACCACCGGCCGTGTGTACGAGCACGTCCTGCGCAAAGAGCGCCGTGGTGATTA CCTGGGCGCGACCATTCAGGTCATCCCGCACATCACCGATGAAATCAAGCGCCGCATCATCAAGGGTGCAGGCGATGCCG ACGTGGCGCTGGTCGAGATCGGCGGCACGGTGGGTGACATCGAGTCCCAGCCGTTCCTTGAAGCCATCCGCCAGTTGCGT TTCGAAGTCGGCGCGCGCCGCGCGATGCTCATGCACCTGACGCTGGTGCCGTATATCGCCACTGCCGGCGAGACCAAGAC CAAGCCGACCCAGCATTCGGTGAAGGAATTGCGCTCCATCGGCCTGCAGCCTGATGTGCTGGTCTGCCGTTCCGATCACC CGATCGACGTTTCCTCGCGTCGCAAGATCGCTCAGTTCACCAACGTCGAAGAGCGTGCAGTCATCGCCCTCGAAGACGCG GACACCATCTACAAGATCCCGGGCATTCTGCATTCGCAAGGCCTGGACGATTTTGTGGTCGAGCGCTTCGGCCTGCAATG TGGCGGTGCCGACCTGTCCGAGTGGGACAAGGTTGTCGACGCCAAGCTCAACCCGGAACACGAAGTGACCATCGCGATGG TCGGCAAGTACATGGAACTGCTCGACGCCTACAAGTCGTTGATCGAAGCCATGAGCCACGCCGGTATTACCAATCGCACC AAGGTCAACCTGCGCTACATCGATTCTGAAGACATTGAAAACCAGGGCACCGGCCTGCTGGAAGGCGTGGATGCAATCCT GGTTCCGGGTGGCTTCGGTCTGCGCGGCGTGGAAGGCAAGATCACGGCCGTTCAGTTCGCCCGTGAGAACAAGGTTCCGT ACCTGGGCATCTGCCTGGGCATGCAGGTCGCAGTCATCGAGTTCGCCCGTAACGTGCTGGGCTGGAAAGACGCCAACTCC ACCGAGTTCGACCGCACCAGCGCACACGCTGTGGTGGGGCTGATCACCGAATGGGAAGACGCCACCGGCGCGGTCGAAAC CCGTACCGAAAGCTCCGATCTGGGCGGCACCATGCGTCTGGGTGCGCAAGAGTGCCAGCTTGAAGCCGGTTCGCTGGTTC ACGATTGCTACACCAAGGACGTGATTGTCGAACGTCATCGTCATCGTTACGAAGTGAACAACAACCTGTTACCGCAACTG ATCGAGGCCGGCCTGAAGATTTCCGGTCGCTCCGGCGACGGCGCGCTGGTTGAAGTGGTCGAAGCACCGGATCATCCATG GTTCGTCGCTTGCCAGTTCCACCCGGAATTCACCTCCACGCCCCGTGACGGTCATCCGCTGTTCAGCGGCTTCGTCAAGG CGGCACTGGCTCAACATCAGAAAAATTCCTGA
Upstream 100 bases:
>100_bases GGGAGTGCACCGTGAATTTTGTCGGTAATCGGGGGCTTCGGCCTTCCTTCGCTATCCCCGGCGGCTCTGACCGCTTTAAC GCAGACTTCTAGGGTTTTTC
Downstream 100 bases:
>100_bases CAGGGACTGCAGACATGGCTCAGAAAATCATCCGCGTAGGTTCGATCGAGGTCGCCAACGACAAGCCAATGGTGCTGTTC GGCGGCATGAACGTACTCGA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTHDGAETDLDLGHYERFIR TTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITDEIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLR FEVGARRAMLMHLTLVPYIATAGETKTKPTQHSVKELRSIGLQPDVLVCRSDHPIDVSSRRKIAQFTNVEERAVIALEDA DTIYKIPGILHSQGLDDFVVERFGLQCGGADLSEWDKVVDAKLNPEHEVTIAMVGKYMELLDAYKSLIEAMSHAGITNRT KVNLRYIDSEDIENQGTGLLEGVDAILVPGGFGLRGVEGKITAVQFARENKVPYLGICLGMQVAVIEFARNVLGWKDANS TEFDRTSAHAVVGLITEWEDATGAVETRTESSDLGGTMRLGAQECQLEAGSLVHDCYTKDVIVERHRHRYEVNNNLLPQL IEAGLKISGRSGDGALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQKNS
Sequences:
>Translated_543_residues MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTHDGAETDLDLGHYERFIR TTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITDEIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLR FEVGARRAMLMHLTLVPYIATAGETKTKPTQHSVKELRSIGLQPDVLVCRSDHPIDVSSRRKIAQFTNVEERAVIALEDA DTIYKIPGILHSQGLDDFVVERFGLQCGGADLSEWDKVVDAKLNPEHEVTIAMVGKYMELLDAYKSLIEAMSHAGITNRT KVNLRYIDSEDIENQGTGLLEGVDAILVPGGFGLRGVEGKITAVQFARENKVPYLGICLGMQVAVIEFARNVLGWKDANS TEFDRTSAHAVVGLITEWEDATGAVETRTESSDLGGTMRLGAQECQLEAGSLVHDCYTKDVIVERHRHRYEVNNNLLPQL IEAGLKISGRSGDGALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQKNS >Mature_542_residues TRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTHDGAETDLDLGHYERFIRT TMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITDEIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLRF EVGARRAMLMHLTLVPYIATAGETKTKPTQHSVKELRSIGLQPDVLVCRSDHPIDVSSRRKIAQFTNVEERAVIALEDAD TIYKIPGILHSQGLDDFVVERFGLQCGGADLSEWDKVVDAKLNPEHEVTIAMVGKYMELLDAYKSLIEAMSHAGITNRTK VNLRYIDSEDIENQGTGLLEGVDAILVPGGFGLRGVEGKITAVQFARENKVPYLGICLGMQVAVIEFARNVLGWKDANST EFDRTSAHAVVGLITEWEDATGAVETRTESSDLGGTMRLGAQECQLEAGSLVHDCYTKDVIVERHRHRYEVNNNLLPQLI EAGLKISGRSGDGALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQKNS
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=560, Percent_Identity=45, Blast_Score=501, Evalue=1e-142, Organism=Homo sapiens, GI28559085, Length=557, Percent_Identity=43.8061041292639, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI28559083, Length=557, Percent_Identity=43.8061041292639, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI221316689, Length=557, Percent_Identity=43.8061041292639, Blast_Score=485, Evalue=1e-137, Organism=Escherichia coli, GI1789142, Length=540, Percent_Identity=69.4444444444444, Blast_Score=771, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=611, Percent_Identity=39.607201309329, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6319432, Length=569, Percent_Identity=40.9490333919156, Blast_Score=446, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=40.5263157894737, Blast_Score=436, Evalue=1e-123, Organism=Drosophila melanogaster, GI24664469, Length=558, Percent_Identity=44.4444444444444, Blast_Score=470, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357815, Length=503, Percent_Identity=43.3399602385686, Blast_Score=399, Evalue=1e-111,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59683; Mature: 59551
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCEE VTHDGAETDLDLGHYERFIRTTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITD EEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH EIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLRFEVGARRAMLMHLTLVPYIA HHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAGETKTKPTQHSVKELRSIGLQPDVLVCRSDHPIDVSSRRKIAQFTNVEERAVIALEDA CCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECC DTIYKIPGILHSQGLDDFVVERFGLQCGGADLSEWDKVVDAKLNPEHEVTIAMVGKYMEL CCEEECCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHH LDAYKSLIEAMSHAGITNRTKVNLRYIDSEDIENQGTGLLEGVDAILVPGGFGLRGVEGK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCC ITAVQFARENKVPYLGICLGMQVAVIEFARNVLGWKDANSTEFDRTSAHAVVGLITEWED EEEEEEHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECCCC ATGAVETRTESSDLGGTMRLGAQECQLEAGSLVHDCYTKDVIVERHRHRYEVNNNLLPQL CCCCEEECCCCCCCCCEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IEAGLKISGRSGDGALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQ HHCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC KNS CCC >Mature Secondary Structure TRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTMLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCEE VTHDGAETDLDLGHYERFIRTTMTQNNNFTTGRVYEHVLRKERRGDYLGATIQVIPHITD EEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH EIKRRIIKGAGDADVALVEIGGTVGDIESQPFLEAIRQLRFEVGARRAMLMHLTLVPYIA HHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAGETKTKPTQHSVKELRSIGLQPDVLVCRSDHPIDVSSRRKIAQFTNVEERAVIALEDA CCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECC DTIYKIPGILHSQGLDDFVVERFGLQCGGADLSEWDKVVDAKLNPEHEVTIAMVGKYMEL CCEEECCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHH LDAYKSLIEAMSHAGITNRTKVNLRYIDSEDIENQGTGLLEGVDAILVPGGFGLRGVEGK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCC ITAVQFARENKVPYLGICLGMQVAVIEFARNVLGWKDANSTEFDRTSAHAVVGLITEWED EEEEEEHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECCCC ATGAVETRTESSDLGGTMRLGAQECQLEAGSLVHDCYTKDVIVERHRHRYEVNNNLLPQL CCCCEEECCCCCCCCCEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IEAGLKISGRSGDGALVEVVEAPDHPWFVACQFHPEFTSTPRDGHPLFSGFVKAALAQHQ HHCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC KNS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA