Click here to switch to the map view.

The map label for this gene is yfhP [C]

Identifier: 66044484

GI number: 66044484

Start: 1394236

End: 1394727

Strand: Direct

Name: yfhP [C]

Synonym: Psyr_1236

Alternate gene names: 66044484

Gene position: 1394236-1394727 (Clockwise)

Preceding gene: 66044483

Following gene: 66044485

Centisome position: 22.88

GC content: 57.32

Gene sequence:

>492_bases
ATGCGACTGACTACTAAAGGCCGATACGCTGTAACAGCCATGCTTGACCTGGCGTTGCATGCGCAGAACGGGCCAGTGTC
TCTGGCCGACATCTCCGAGCGGCAGGGTATTTCCCTGTCCTACCTCGAGCAGCTGTTCGCCAAGCTGCGTCGCGGCAATC
TGGTTTCCAGTGTTCGTGGTCCGGGTGGTGGTTACCAGCTGTCGCGCGACATGAAAGGCATCCAGGTTGCTCAGGTTGTC
GATGCAGTCAATGAATCGGTCGATGCTACGCGGTGTCAGGGTCTGGGCGATTGCCACGCCGGCGATACCTGCCTGACCCA
TCACTTGTGGTGCGACCTGAGCCAGCAGATTCACGAATTTCTAAGCGGTATCAGCTTGGCGGATCTTGTCACTCGCCGTG
AGGTACAAGAAGTCGCTCAGCGCCAGGATATGCGCCGTGGTCATAATCACATGTCGCAACTGGGTAAGATCGAAACGTCC
GCCGTCGAATGA

Upstream 100 bases:

>100_bases
ACTTTTCGCTAATCCCGACTGTTTTACTTGGTCTAATAGTTGACTCTTTTACTCGGGAATAGCATACTCGCTCTCATTCC
GAACCTCTGCGGTATACGCC

Downstream 100 bases:

>100_bases
ACGCAGATGAATGAGCGGTGCGCCTGCCTGATAGGAGAGCTTCAATGAAATTGCCAATTTACCTCGACTACTCCGCGACG
ACCCCGGTCGATCCGCGCGT

Product: transcription factor IscR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRLTTKGRYAVTAMLDLALHAQNGPVSLADISERQGISLSYLEQLFAKLRRGNLVSSVRGPGGGYQLSRDMKGIQVAQVV
DAVNESVDATRCQGLGDCHAGDTCLTHHLWCDLSQQIHEFLSGISLADLVTRREVQEVAQRQDMRRGHNHMSQLGKIETS
AVE

Sequences:

>Translated_163_residues
MRLTTKGRYAVTAMLDLALHAQNGPVSLADISERQGISLSYLEQLFAKLRRGNLVSSVRGPGGGYQLSRDMKGIQVAQVV
DAVNESVDATRCQGLGDCHAGDTCLTHHLWCDLSQQIHEFLSGISLADLVTRREVQEVAQRQDMRRGHNHMSQLGKIETS
AVE
>Mature_163_residues
MRLTTKGRYAVTAMLDLALHAQNGPVSLADISERQGISLSYLEQLFAKLRRGNLVSSVRGPGGGYQLSRDMKGIQVAQVV
DAVNESVDATRCQGLGDCHAGDTCLTHHLWCDLSQQIHEFLSGISLADLVTRREVQEVAQRQDMRRGHNHMSQLGKIETS
AVE

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=142, Percent_Identity=66.1971830985916, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17899; Mature: 17899

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTKGRYAVTAMLDLALHAQNGPVSLADISERQGISLSYLEQLFAKLRRGNLVSSVRG
CCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCC
PGGGYQLSRDMKGIQVAQVVDAVNESVDATRCQGLGDCHAGDTCLTHHLWCDLSQQIHEF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LSGISLADLVTRREVQEVAQRQDMRRGHNHMSQLGKIETSAVE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MRLTTKGRYAVTAMLDLALHAQNGPVSLADISERQGISLSYLEQLFAKLRRGNLVSSVRG
CCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCC
PGGGYQLSRDMKGIQVAQVVDAVNESVDATRCQGLGDCHAGDTCLTHHLWCDLSQQIHEF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LSGISLADLVTRREVQEVAQRQDMRRGHNHMSQLGKIETSAVE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9582371 [H]