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The map label for this gene is cyoA [H]

Identifier: 66044392

GI number: 66044392

Start: 1292357

End: 1293298

Strand: Direct

Name: cyoA [H]

Synonym: Psyr_1141

Alternate gene names: 66044392

Gene position: 1292357-1293298 (Clockwise)

Preceding gene: 66044391

Following gene: 66044393

Centisome position: 21.21

GC content: 54.46

Gene sequence:

>942_bases
ATGAGTAAAAAAAGGTACCCCAGGTTTTTTGGCTTCTTGGCCCTTTTCTGTATGCTTTTGCTCAGTGGATGCGATGGCGT
ACCTCTGCTCGATCCAAAAGGGCAGGTGGGTATCGAGCAGCGGAACCTGATCGTAATCGCAACGTTGCTGATGCTGATTG
TCGTGATCCCGGTCATCCTGATGACCCTGATCTTCGCCTGGAAGTATCGCGCATCGAACAAGGCTGCCAAGTACACGCCG
GACTGGTCTCACTCCACCAAGATCGAAATCGCAGTCTGGGGCGTACCCATGCTGTTGCTGGTCTTCCTGGGGTACATCAC
CTACGTCTCGACTCACTCGCTGGACCCTTACCGTCCGCTTGATTCGGACGTCAAGCCGGTCACCATCCAGGCGATCTCGG
TTGACTGGAAATGGGTATTCATCTACCCGGACTACGGCATTGCCACGGTCAACAAGATCGTGTTCCCGGCCAAGACTCCG
ATCAACTTCCAGGTGACCTCGGACAGCGTGATGAACTCGTTCTTCATCCCGGGTCTGGGTGGTCAGATCTACGCGATGGC
GGGCATGCACACCAAGCTGCACCTCATCGCCAACGAGAATCACGAATTCAACGGTATTTCGGCCAACTACAGTGGCGCAG
GCTTTACCGGCATGAAGTTCAAGGCCATCGCTACCAGCCAGGCTGATTTCGACAGCTGGGTCAGCGAAGTCAAGAGCTCG
CCCAAAAAGCTTGGCACTGCCGAATACGCCGAGTTGATCAAGCCAAGCGAACGCAACCCTGTCGAACTCTTTTCCTCGGT
CACCCCGAACCTGTTCCAGATCGTCATCGACAAGTATGAAGGTATGAATCCGGGCAAGAAGGTTGTTGCTGGTGAGAAGG
AAGTAGCCGGTGAGGCTGGTGCGGAAAAAGGCAAAAATTCAGCTGCTGGGGCAGAGGAGTAA

Upstream 100 bases:

>100_bases
GCCCTTGTTCAATTCAAAAAAATTAGCCGGCACTGGCAGGGCGAAGTGTTGGCGGTCGAAACCCAACTGCACCGCGCAAG
CTGCTTTTAGAGGTCGTGAA

Downstream 100 bases:

>100_bases
ACGATGTTTGGCAAATTAAGTCTGGAAGCGGTGCCGTTCCACGAGCCCATAGTCATGGTGACACTTGCCATGATCGCGCT
CGGCGGCATTGCGGTTGTCG

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSKKRYPRFFGFLALFCMLLLSGCDGVPLLDPKGQVGIEQRNLIVIATLLMLIVVIPVILMTLIFAWKYRASNKAAKYTP
DWSHSTKIEIAVWGVPMLLLVFLGYITYVSTHSLDPYRPLDSDVKPVTIQAISVDWKWVFIYPDYGIATVNKIVFPAKTP
INFQVTSDSVMNSFFIPGLGGQIYAMAGMHTKLHLIANENHEFNGISANYSGAGFTGMKFKAIATSQADFDSWVSEVKSS
PKKLGTAEYAELIKPSERNPVELFSSVTPNLFQIVIDKYEGMNPGKKVVAGEKEVAGEAGAEKGKNSAAGAEE

Sequences:

>Translated_313_residues
MSKKRYPRFFGFLALFCMLLLSGCDGVPLLDPKGQVGIEQRNLIVIATLLMLIVVIPVILMTLIFAWKYRASNKAAKYTP
DWSHSTKIEIAVWGVPMLLLVFLGYITYVSTHSLDPYRPLDSDVKPVTIQAISVDWKWVFIYPDYGIATVNKIVFPAKTP
INFQVTSDSVMNSFFIPGLGGQIYAMAGMHTKLHLIANENHEFNGISANYSGAGFTGMKFKAIATSQADFDSWVSEVKSS
PKKLGTAEYAELIKPSERNPVELFSSVTPNLFQIVIDKYEGMNPGKKVVAGEKEVAGEAGAEKGKNSAAGAEE
>Mature_312_residues
SKKRYPRFFGFLALFCMLLLSGCDGVPLLDPKGQVGIEQRNLIVIATLLMLIVVIPVILMTLIFAWKYRASNKAAKYTPD
WSHSTKIEIAVWGVPMLLLVFLGYITYVSTHSLDPYRPLDSDVKPVTIQAISVDWKWVFIYPDYGIATVNKIVFPAKTPI
NFQVTSDSVMNSFFIPGLGGQIYAMAGMHTKLHLIANENHEFNGISANYSGAGFTGMKFKAIATSQADFDSWVSEVKSSP
KKLGTAEYAELIKPSERNPVELFSSVTPNLFQIVIDKYEGMNPGKKVVAGEKEVAGEAGAEKGKNSAAGAEE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=307, Percent_Identity=57.9804560260586, Blast_Score=352, Evalue=2e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 34431; Mature: 34300

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKRYPRFFGFLALFCMLLLSGCDGVPLLDPKGQVGIEQRNLIVIATLLMLIVVIPVIL
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MTLIFAWKYRASNKAAKYTPDWSHSTKIEIAVWGVPMLLLVFLGYITYVSTHSLDPYRPL
HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC
DSDVKPVTIQAISVDWKWVFIYPDYGIATVNKIVFPAKTPINFQVTSDSVMNSFFIPGLG
CCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHEEECCCCCEEEEECCHHHHHHHCCCCCC
GQIYAMAGMHTKLHLIANENHEFNGISANYSGAGFTGMKFKAIATSQADFDSWVSEVKSS
CCEEEEECCCEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCC
PKKLGTAEYAELIKPSERNPVELFSSVTPNLFQIVIDKYEGMNPGKKVVAGEKEVAGEAG
HHHCCHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCCHHHCCCCC
AEKGKNSAAGAEE
CCCCCCCCCCCCC
>Mature Secondary Structure 
SKKRYPRFFGFLALFCMLLLSGCDGVPLLDPKGQVGIEQRNLIVIATLLMLIVVIPVIL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MTLIFAWKYRASNKAAKYTPDWSHSTKIEIAVWGVPMLLLVFLGYITYVSTHSLDPYRPL
HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC
DSDVKPVTIQAISVDWKWVFIYPDYGIATVNKIVFPAKTPINFQVTSDSVMNSFFIPGLG
CCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHEEECCCCCEEEEECCHHHHHHHCCCCCC
GQIYAMAGMHTKLHLIANENHEFNGISANYSGAGFTGMKFKAIATSQADFDSWVSEVKSS
CCEEEEECCCEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCC
PKKLGTAEYAELIKPSERNPVELFSSVTPNLFQIVIDKYEGMNPGKKVVAGEKEVAGEAG
HHHCCHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCCHHHCCCCC
AEKGKNSAAGAEE
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]