| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044381
Identifier: 66044381
GI number: 66044381
Start: 1281587
End: 1281967
Strand: Direct
Name: 66044381
Synonym: Psyr_1130
Alternate gene names: NA
Gene position: 1281587-1281967 (Clockwise)
Preceding gene: 66044375
Following gene: 66044382
Centisome position: 21.03
GC content: 53.54
Gene sequence:
>381_bases ATGAGCAGTCAGAAATCGAACGGAAAAGTGATGGTGAAGTTACGGTCCCTTGATAAACGTTTGTGGGTCGCAATCCTGTC GACGTTGCTGCTGGCTGCTCCCGGTTTGTCATGGGCAAAGGACGGTGCAATTACGTTGCGTGGCAGTATTGTCAACAGCA GTTGCATGATTTCCAGTACAGAGATGACGGCGCCCAGTGTTCATTCGCGAACGCTGGAAGTTGCACCCGGGGTCACTATT CATGTGAGCACCGAACGCAATGTCTGTGGTGAGCAGGCAATGCCCTTCGTGACGCAGTATCAGGTGCTGCCTGCCGCCGT GTTAATCGACGGAGAAGCCCTGCAGGCAAGTGCTGCAGTGGTCACGTTGAGCTATCAGTAA
Upstream 100 bases:
>100_bases AAAGTCCTAGGAGTTTTCCTACATTTTCCTAAGTAGGTTTCTGGCAGGTCATTCTCTCATCAACTTAAATTATCGTATGA GTCTATGAATGGAGTACGCC
Downstream 100 bases:
>100_bases CTACCGGTCTGTCGTGTTTTCTCGTCCGGACTGTCACGCTTTCAAGGGGCAGTCCAGTGCCTGTAAAGTTTGAACGATAC ATAACCTCGGCCACAGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSSQKSNGKVMVKLRSLDKRLWVAILSTLLLAAPGLSWAKDGAITLRGSIVNSSCMISSTEMTAPSVHSRTLEVAPGVTI HVSTERNVCGEQAMPFVTQYQVLPAAVLIDGEALQASAAVVTLSYQ
Sequences:
>Translated_126_residues MSSQKSNGKVMVKLRSLDKRLWVAILSTLLLAAPGLSWAKDGAITLRGSIVNSSCMISSTEMTAPSVHSRTLEVAPGVTI HVSTERNVCGEQAMPFVTQYQVLPAAVLIDGEALQASAAVVTLSYQ >Mature_125_residues SSQKSNGKVMVKLRSLDKRLWVAILSTLLLAAPGLSWAKDGAITLRGSIVNSSCMISSTEMTAPSVHSRTLEVAPGVTIH VSTERNVCGEQAMPFVTQYQVLPAAVLIDGEALQASAAVVTLSYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13359; Mature: 13227
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQKSNGKVMVKLRSLDKRLWVAILSTLLLAAPGLSWAKDGAITLRGSIVNSSCMISST CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEEEECC EMTAPSVHSRTLEVAPGVTIHVSTERNVCGEQAMPFVTQYQVLPAAVLIDGEALQASAAV CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHEECCEEEEECCCCCCCCEEE VTLSYQ EEEEEC >Mature Secondary Structure SSQKSNGKVMVKLRSLDKRLWVAILSTLLLAAPGLSWAKDGAITLRGSIVNSSCMISST CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEEEECC EMTAPSVHSRTLEVAPGVTIHVSTERNVCGEQAMPFVTQYQVLPAAVLIDGEALQASAAV CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHEECCEEEEECCCCCCCCEEE VTLSYQ EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA