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The map label for this gene is ycjP [C]

Identifier: 66044366

GI number: 66044366

Start: 1263594

End: 1264439

Strand: Direct

Name: ycjP [C]

Synonym: Psyr_1115

Alternate gene names: 66044366

Gene position: 1263594-1264439 (Clockwise)

Preceding gene: 66044365

Following gene: 66044367

Centisome position: 20.74

GC content: 56.97

Gene sequence:

>846_bases
ATGACTAGTCATGTTGGCAAACCGGGCATCAGCTTCAGTCGTGTTCTGATTTACGCGGTGCTGATGCTGGCCTGTCTGAT
TTATCTGGTGCCGCTGGTGGTCATGCTGTTCACCAGCTTCAAGACCCCCGAGGACATCGGCACCGGCAACCTGTTGAGCT
GGCCGAGCGTAGTGACTGCAATCGGCTGGATAAAAGCCTGGGATCTGGTCGATGGCTACTTCTGGAACTCGATAAAAATC
ACCGTTCCGGCCGTGATCATCTCCACCGCAATCGGCGCGCTCAATGGCTATGTGCTGTCGATGTGGCGTTTCAAGGGCTC
GCAGCTGTTCTTCGGTCTGTTGCTGTTCGGTTGCTTTCTGCCGTTTCAGACCGTGCTGCTGCCGGCATCCTTTACATTGG
GCAAGATGGGCCTGGCCAACACGACCACCGGGCTGGTGTTTGTTCATGTGGTCTACGGGCTGGCATTTACCACGCTATTC
TTCCGTAACTACTACGTCAGCATTCCCGACGCGCTGGTCAAGGCTGCACGACTGGACGGTGCCGGTTTCTTCACCATCTT
CGGGCGCATCATTCTGCCGATGTCCACGCCCATCGTGATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGATT
TCCTGTTCGGCGTTGTGTTCTCCAGCGGCGAGTCTCAGCCGATCACTGTGGCCCTGAACAATCTGGTCAACACCAGCACA
GGTGCCAAGGAATACAACGTTGACATGGCGGCGGCGATGATTGCCGGCCTGCCGACACTGCTGGTCTACGTACTGGCTGG
CAAGTATTTCCTGCGTGGGCTCACGGCCGGCGCGGTCAAGGGGTAA

Upstream 100 bases:

>100_bases
GGCCAGATGGGCATGGGCTCTGCCAGTGCCATTCTGATGCTCGGCGCGATCCTGGCGATTCTGGTGCCGTATCTGTATTC
CGAGCTGAGGACCAAACGCC

Downstream 100 bases:

>100_bases
TCATGGCGACTCTCGAATTACGCAACGTCAACAAGACCTACGGCAGCAACCTGCCGGACACACTCAAGAACATCGACCTG
TCGATCAAGGATGGCGAGTT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTSHVGKPGISFSRVLIYAVLMLACLIYLVPLVVMLFTSFKTPEDIGTGNLLSWPSVVTAIGWIKAWDLVDGYFWNSIKI
TVPAVIISTAIGALNGYVLSMWRFKGSQLFFGLLLFGCFLPFQTVLLPASFTLGKMGLANTTTGLVFVHVVYGLAFTTLF
FRNYYVSIPDALVKAARLDGAGFFTIFGRIILPMSTPIVMVCLIWQFTQIWNDFLFGVVFSSGESQPITVALNNLVNTST
GAKEYNVDMAAAMIAGLPTLLVYVLAGKYFLRGLTAGAVKG

Sequences:

>Translated_281_residues
MTSHVGKPGISFSRVLIYAVLMLACLIYLVPLVVMLFTSFKTPEDIGTGNLLSWPSVVTAIGWIKAWDLVDGYFWNSIKI
TVPAVIISTAIGALNGYVLSMWRFKGSQLFFGLLLFGCFLPFQTVLLPASFTLGKMGLANTTTGLVFVHVVYGLAFTTLF
FRNYYVSIPDALVKAARLDGAGFFTIFGRIILPMSTPIVMVCLIWQFTQIWNDFLFGVVFSSGESQPITVALNNLVNTST
GAKEYNVDMAAAMIAGLPTLLVYVLAGKYFLRGLTAGAVKG
>Mature_280_residues
TSHVGKPGISFSRVLIYAVLMLACLIYLVPLVVMLFTSFKTPEDIGTGNLLSWPSVVTAIGWIKAWDLVDGYFWNSIKIT
VPAVIISTAIGALNGYVLSMWRFKGSQLFFGLLLFGCFLPFQTVLLPASFTLGKMGLANTTTGLVFVHVVYGLAFTTLFF
RNYYVSIPDALVKAARLDGAGFFTIFGRIILPMSTPIVMVCLIWQFTQIWNDFLFGVVFSSGESQPITVALNNLVNTSTG
AKEYNVDMAAAMIAGLPTLLVYVLAGKYFLRGLTAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=29.8932384341637, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1789860, Length=209, Percent_Identity=24.8803827751196, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=30.4147465437788, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30610; Mature: 30479

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSHVGKPGISFSRVLIYAVLMLACLIYLVPLVVMLFTSFKTPEDIGTGNLLSWPSVVTA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
IGWIKAWDLVDGYFWNSIKITVPAVIISTAIGALNGYVLSMWRFKGSQLFFGLLLFGCFL
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
PFQTVLLPASFTLGKMGLANTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALVKAARLDG
HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCC
AGFFTIFGRIILPMSTPIVMVCLIWQFTQIWNDFLFGVVFSSGESQPITVALNNLVNTST
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCC
GAKEYNVDMAAAMIAGLPTLLVYVLAGKYFLRGLTAGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSHVGKPGISFSRVLIYAVLMLACLIYLVPLVVMLFTSFKTPEDIGTGNLLSWPSVVTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
IGWIKAWDLVDGYFWNSIKITVPAVIISTAIGALNGYVLSMWRFKGSQLFFGLLLFGCFL
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
PFQTVLLPASFTLGKMGLANTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALVKAARLDG
HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCC
AGFFTIFGRIILPMSTPIVMVCLIWQFTQIWNDFLFGVVFSSGESQPITVALNNLVNTST
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCC
GAKEYNVDMAAAMIAGLPTLLVYVLAGKYFLRGLTAGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]