| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fecR [H]
Identifier: 66044357
GI number: 66044357
Start: 1253132
End: 1254097
Strand: Reverse
Name: fecR [H]
Synonym: Psyr_1106
Alternate gene names: 66044357
Gene position: 1254097-1253132 (Counterclockwise)
Preceding gene: 66044358
Following gene: 66044356
Centisome position: 20.58
GC content: 63.25
Gene sequence:
>966_bases GTGGCCCCGAAAACAGAACGTCCGCACGCGATCGCGCAGGACGTGTTGAGCAACGCTGCAATGGATCAGGCCCTGACCTG GCTGATCGAGCTGGAAGGCGCAGACGATGCGCATCAGGCGCGTTTTCAGGAATGGCTGAATGCCGATCCCGACCACGCTC GCGCATTCGAGAAGGCCCGGACGCTCTGGAGCTCGCAGCCGGTTCGGTACGCAGCCGAAAATATCGCACCACCGCGCAAG CGCTCGGCATGGCAGCGTGCCCGTTCCCACTGGAAACCTCTGGCCACTGCTGCGGTGCTGCTGTTGGGGTTGTTCAGCTT CAGCAATCTGCCCTTGCGCCTGCAGGCCGATCATCTGACGGTCGTCGGTGAACGCCAGCGCCTGGAACTGGCGGACGGCT CGAAGGTGCTGCTCAATACTGATTCGGCTTTCTCCAGTCAGGTCGGAGAAAAACAGCGCTCTGCCCGCTTGTACCAGGGT GAAGCCTTCTTCGATGTCACGCCCAGGCCCGGGCTGCCCTTGGAAATCGAAGCAGGCCCGGTGCGCATGAGCGCCAACAG CACCGCGTTTTCGGTGCGCTACCTGAACGGCGTCGCGCAGGTACACGTGCAACGCGGCGCTGTCGACGTGCACGCCAGCC ATGGTGACTCCAGCCTCAGTCTGGGCGCTGGAGACAGCGTTCGCGTGGGACCTGACGGGTTTGGGCAGCGTGAAAAGCTT GACCCGGCCCGGGACCTGGCCTGGGTGCAGGGCCGACTGATATTCGACAACTCCCCGCTGGGCGACGTACTGGCTGAGCT GCGCCGTTACTACCCAGGCTGGATCGTCAGCACCAATGCGCAACTGGACCGTGTTGCCGTAACCGGCAACTACCGCCTGG ACAACCCGCTCGACGTGGTGCGTTCGCTGGCGCAGATCACGTCGGCAAGCATTCACGAAATGCCCGCGCTGGTGATTCTC AACTGA
Upstream 100 bases:
>100_bases CGATCTGCATAGGCGTCCTTTCCAGGCTTGACCCACCCTGAACCCTGCCGCACGCTGCCACACTCATATCGATACAGTTT CAGGATTGCCGAGGAACACC
Downstream 100 bases:
>100_bases AGAAAAGTTTTTTTACTCGATAGCGACTGGCCGTTCGTCTAGTCATAGCCAATGCAACTGATTCTCATTGTGAAACAGCT TGTAAACACTATGACGAGCA
Product: FecR protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MAPKTERPHAIAQDVLSNAAMDQALTWLIELEGADDAHQARFQEWLNADPDHARAFEKARTLWSSQPVRYAAENIAPPRK RSAWQRARSHWKPLATAAVLLLGLFSFSNLPLRLQADHLTVVGERQRLELADGSKVLLNTDSAFSSQVGEKQRSARLYQG EAFFDVTPRPGLPLEIEAGPVRMSANSTAFSVRYLNGVAQVHVQRGAVDVHASHGDSSLSLGAGDSVRVGPDGFGQREKL DPARDLAWVQGRLIFDNSPLGDVLAELRRYYPGWIVSTNAQLDRVAVTGNYRLDNPLDVVRSLAQITSASIHEMPALVIL N
Sequences:
>Translated_321_residues MAPKTERPHAIAQDVLSNAAMDQALTWLIELEGADDAHQARFQEWLNADPDHARAFEKARTLWSSQPVRYAAENIAPPRK RSAWQRARSHWKPLATAAVLLLGLFSFSNLPLRLQADHLTVVGERQRLELADGSKVLLNTDSAFSSQVGEKQRSARLYQG EAFFDVTPRPGLPLEIEAGPVRMSANSTAFSVRYLNGVAQVHVQRGAVDVHASHGDSSLSLGAGDSVRVGPDGFGQREKL DPARDLAWVQGRLIFDNSPLGDVLAELRRYYPGWIVSTNAQLDRVAVTGNYRLDNPLDVVRSLAQITSASIHEMPALVIL N >Mature_320_residues APKTERPHAIAQDVLSNAAMDQALTWLIELEGADDAHQARFQEWLNADPDHARAFEKARTLWSSQPVRYAAENIAPPRKR SAWQRARSHWKPLATAAVLLLGLFSFSNLPLRLQADHLTVVGERQRLELADGSKVLLNTDSAFSSQVGEKQRSARLYQGE AFFDVTPRPGLPLEIEAGPVRMSANSTAFSVRYLNGVAQVHVQRGAVDVHASHGDSSLSLGAGDSVRVGPDGFGQREKLD PARDLAWVQGRLIFDNSPLGDVLAELRRYYPGWIVSTNAQLDRVAVTGNYRLDNPLDVVRSLAQITSASIHEMPALVILN
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=204, Percent_Identity=30.3921568627451, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35323; Mature: 35192
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKTERPHAIAQDVLSNAAMDQALTWLIELEGADDAHQARFQEWLNADPDHARAFEKAR CCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHH TLWSSQPVRYAAENIAPPRKRSAWQRARSHWKPLATAAVLLLGLFSFSNLPLRLQADHLT HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCEE VVGERQRLELADGSKVLLNTDSAFSSQVGEKQRSARLYQGEAFFDVTPRPGLPLEIEAGP EECCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEECCCCCCCEEECCCC VRMSANSTAFSVRYLNGVAQVHVQRGAVDVHASHGDSSLSLGAGDSVRVGPDGFGQREKL EEEECCCCEEEEHHHHHHHHEEEECCEEEEEECCCCCCEEECCCCCEEECCCCCCCCCCC DPARDLAWVQGRLIFDNSPLGDVLAELRRYYPGWIVSTNAQLDRVAVTGNYRLDNPLDVV CHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCHHHHH RSLAQITSASIHEMPALVILN HHHHHHHHHHHHHCCEEEEEC >Mature Secondary Structure APKTERPHAIAQDVLSNAAMDQALTWLIELEGADDAHQARFQEWLNADPDHARAFEKAR CCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHH TLWSSQPVRYAAENIAPPRKRSAWQRARSHWKPLATAAVLLLGLFSFSNLPLRLQADHLT HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCEE VVGERQRLELADGSKVLLNTDSAFSSQVGEKQRSARLYQGEAFFDVTPRPGLPLEIEAGP EECCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEECCCCCCCEEECCCC VRMSANSTAFSVRYLNGVAQVHVQRGAVDVHASHGDSSLSLGAGDSVRVGPDGFGQREKL EEEECCCCEEEEHHHHHHHHEEEECCEEEEEECCCCCCEEECCCCCEEECCCCCCCCCCC DPARDLAWVQGRLIFDNSPLGDVLAELRRYYPGWIVSTNAQLDRVAVTGNYRLDNPLDVV CHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCHHHHH RSLAQITSASIHEMPALVILN HHHHHHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]