| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pleC [H]
Identifier: 66044351
GI number: 66044351
Start: 1244685
End: 1246415
Strand: Reverse
Name: pleC [H]
Synonym: Psyr_1100
Alternate gene names: 66044351
Gene position: 1246415-1244685 (Counterclockwise)
Preceding gene: 66044352
Following gene: 66044350
Centisome position: 20.45
GC content: 60.49
Gene sequence:
>1731_bases ATGCCAACCTCGCCAGTGGACCGCCCGCTTGTCGACGCTCAGTCTCGCGCTGAAAAAATCGTCGAATCTCGCCGTCAGAA AATCCTTCTCAAGACCGGCGCGCTGCAGGACGCAATTTTCAACAGCGCCTACTTCTCCAGCATCGCAACCGATGAGCACG GCGTTATCCAGATATTCAATGTCGGCGCCGAACGGATGCTCGGCTATCACTCCGAAGACGTGGTCGACAAGATCACACCT GCGGACATCTCCGACCCCGCCGAGCTCATCATCCGCGCGGCGGCCCTCAGCCATGAACTCAACACGCCCATCACGCCGGG TTTCGAAGCCCTGGTATTCAAGGCTTCGCGCGGCATCGAAGACATCTACGAACTGACCTACATCCGCAAGGATGGCAGCC GCCTGTCGGCCATGGTCTCGGTCACGTCACTGCGCGACAGCGCCGAAACCATCATCGGTTATCTGCTGATCGGCACCGAC AACACCGCGCGCAAGCAGGAGGAAGAAGCTCAGGCCTTGCTCGATCAGCGCTTGCGGGACCAACAGTTCTATACCCGCTC ACTGATCGAGTCGAACATCGATGCGCTGATGATGACCGACCCGCAAGGCATCATTTCCGACGTCAACAAGCAGATGATGG CGCTGACCGGGCGCACCCGCGACGAATTGATCGGCGCGCCCTGCAAGAACTTCTTCACCGACCCGGCGAGTGCCGATGCC GCCATCAAGCGCGTGCTCAGCGAGCACAAGGTCAGTGACTACGAACTCACCGTGCGCGCCTACGACGGCACTGAAACCGT GGTGTCCTACAACGCCGCGACCTTTCATGACCGTGACCGCAAGCTCAAGGGTGTCTTCGCCGCGGCCCGCGACGTGACCG AGCGCAAGCGTTTCGAGCGAACGCTGGAAGAAAAGAATATCGAGCTGGAACACGCCAGCCACATGAAGTCCGAGTTTCTT GCCACCATGTCGCACGAGCTGCGCACCCCGCTCAACGCCGTGATCGGTTTCTCCGAGGCACTCAGGGACGGCATGGTCGG CGACATGACCGATGCCCAGCGACGCTACATAGGCGATATCTTCAACAGCGGCCAGCACCTGCTGTCGCTGATCAATGACA TCCTCGACCTGTCCAAGGTCGAGGCCGGCATGATGACGCTGGAGCTCGAGTCGGTCGATCTGGACGAACTGCTGAGCAAC AGCCTGCTGATCGTGCGTGAGCAAGCCGCCCTGCAACACATTCAGCTGAAACTGGAAACAGAGGCCGAATTCGGTGAGCT TGAGCTCGATCGACGCAAGACCAAGCAGATCGTCTACAACCTGCTGGCCAACGCCGTGAAATTCAGCGAGCCCGGTGGCT GGGTGACGCTGGCGGTGCGATTGGTGCCGGCTTCCCAGGCGGGTCTTATCGATGGCGACTGGCCGACCTACGGGTTTGCG CTTGCGTCCGGTGACTGTGAGCAGTTTCTGGAACTGAGTGTCAGCGACACCGGAATCGGCATCGCCCAAAGCGACATGAA CAAGCTGTTCAAGGCGTTCAGCCAGATCGACAGCGGCCTGGCACGCAAATTCGAGGGCACCGGACTGGGTCTTGCGATGG TCAAGCAACTGACCGAACTTCACGGCGGCTGCGTCGCGGTCGCCAGCGTGAAGGACCTCGGCGCACGCTTCGTGGTCTGG CTGCCCATCCGCTCACCTGAATCAGCGGAGGCGCGATGGCCCAGATCCTGA
Upstream 100 bases:
>100_bases CTGGTATCGTCCATGAACCTCTTATCATCCATTTGAATGGATGTCCGTAGTGTGATTACGGCCGTAATGGCAAAAAGGTC AGGTAGTACCGGGAAGTCAT
Downstream 100 bases:
>100_bases TCATTGAAGACAATGCGGCGAACATGCGTCTGGCAGAGCTATTGCTGACCAGCGCCGGGCACACTGTGCTGTCGGCCGTC GATGCCGAAACCGGCCTGAA
Product: PAS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MPTSPVDRPLVDAQSRAEKIVESRRQKILLKTGALQDAIFNSAYFSSIATDEHGVIQIFNVGAERMLGYHSEDVVDKITP ADISDPAELIIRAAALSHELNTPITPGFEALVFKASRGIEDIYELTYIRKDGSRLSAMVSVTSLRDSAETIIGYLLIGTD NTARKQEEEAQALLDQRLRDQQFYTRSLIESNIDALMMTDPQGIISDVNKQMMALTGRTRDELIGAPCKNFFTDPASADA AIKRVLSEHKVSDYELTVRAYDGTETVVSYNAATFHDRDRKLKGVFAAARDVTERKRFERTLEEKNIELEHASHMKSEFL ATMSHELRTPLNAVIGFSEALRDGMVGDMTDAQRRYIGDIFNSGQHLLSLINDILDLSKVEAGMMTLELESVDLDELLSN SLLIVREQAALQHIQLKLETEAEFGELELDRRKTKQIVYNLLANAVKFSEPGGWVTLAVRLVPASQAGLIDGDWPTYGFA LASGDCEQFLELSVSDTGIGIAQSDMNKLFKAFSQIDSGLARKFEGTGLGLAMVKQLTELHGGCVAVASVKDLGARFVVW LPIRSPESAEARWPRS
Sequences:
>Translated_576_residues MPTSPVDRPLVDAQSRAEKIVESRRQKILLKTGALQDAIFNSAYFSSIATDEHGVIQIFNVGAERMLGYHSEDVVDKITP ADISDPAELIIRAAALSHELNTPITPGFEALVFKASRGIEDIYELTYIRKDGSRLSAMVSVTSLRDSAETIIGYLLIGTD NTARKQEEEAQALLDQRLRDQQFYTRSLIESNIDALMMTDPQGIISDVNKQMMALTGRTRDELIGAPCKNFFTDPASADA AIKRVLSEHKVSDYELTVRAYDGTETVVSYNAATFHDRDRKLKGVFAAARDVTERKRFERTLEEKNIELEHASHMKSEFL ATMSHELRTPLNAVIGFSEALRDGMVGDMTDAQRRYIGDIFNSGQHLLSLINDILDLSKVEAGMMTLELESVDLDELLSN SLLIVREQAALQHIQLKLETEAEFGELELDRRKTKQIVYNLLANAVKFSEPGGWVTLAVRLVPASQAGLIDGDWPTYGFA LASGDCEQFLELSVSDTGIGIAQSDMNKLFKAFSQIDSGLARKFEGTGLGLAMVKQLTELHGGCVAVASVKDLGARFVVW LPIRSPESAEARWPRS >Mature_575_residues PTSPVDRPLVDAQSRAEKIVESRRQKILLKTGALQDAIFNSAYFSSIATDEHGVIQIFNVGAERMLGYHSEDVVDKITPA DISDPAELIIRAAALSHELNTPITPGFEALVFKASRGIEDIYELTYIRKDGSRLSAMVSVTSLRDSAETIIGYLLIGTDN TARKQEEEAQALLDQRLRDQQFYTRSLIESNIDALMMTDPQGIISDVNKQMMALTGRTRDELIGAPCKNFFTDPASADAA IKRVLSEHKVSDYELTVRAYDGTETVVSYNAATFHDRDRKLKGVFAAARDVTERKRFERTLEEKNIELEHASHMKSEFLA TMSHELRTPLNAVIGFSEALRDGMVGDMTDAQRRYIGDIFNSGQHLLSLINDILDLSKVEAGMMTLELESVDLDELLSNS LLIVREQAALQHIQLKLETEAEFGELELDRRKTKQIVYNLLANAVKFSEPGGWVTLAVRLVPASQAGLIDGDWPTYGFAL ASGDCEQFLELSVSDTGIGIAQSDMNKLFKAFSQIDSGLARKFEGTGLGLAMVKQLTELHGGCVAVASVKDLGARFVVWL PIRSPESAEARWPRS
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=410, Percent_Identity=30.2439024390244, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI145693157, Length=293, Percent_Identity=33.4470989761092, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1789149, Length=270, Percent_Identity=34.0740740740741, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1788713, Length=276, Percent_Identity=32.9710144927536, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI87081816, Length=260, Percent_Identity=32.6923076923077, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1788549, Length=392, Percent_Identity=24.234693877551, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1790436, Length=261, Percent_Identity=27.5862068965517, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788393, Length=262, Percent_Identity=26.7175572519084, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1786600, Length=283, Percent_Identity=25.7950530035336, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790346, Length=259, Percent_Identity=27.027027027027, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790861, Length=267, Percent_Identity=23.2209737827715, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786783, Length=251, Percent_Identity=23.1075697211155, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789808, Length=251, Percent_Identity=24.7011952191235, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082128, Length=236, Percent_Identity=26.6949152542373, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 63740; Mature: 63609
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSPVDRPLVDAQSRAEKIVESRRQKILLKTGALQDAIFNSAYFSSIATDEHGVIQIFN CCCCCCCCCCHHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEE VGAERMLGYHSEDVVDKITPADISDPAELIIRAAALSHELNTPITPGFEALVFKASRGIE CCHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH DIYELTYIRKDGSRLSAMVSVTSLRDSAETIIGYLLIGTDNTARKQEEEAQALLDQRLRD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHH QQFYTRSLIESNIDALMMTDPQGIISDVNKQMMALTGRTRDELIGAPCKNFFTDPASADA HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCHHH AIKRVLSEHKVSDYELTVRAYDGTETVVSYNAATFHDRDRKLKGVFAAARDVTERKRFER HHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHH TLEEKNIELEHASHMKSEFLATMSHELRTPLNAVIGFSEALRDGMVGDMTDAQRRYIGDI HHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FNSGQHLLSLINDILDLSKVEAGMMTLELESVDLDELLSNSLLIVREQAALQHIQLKLET HHCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCEEEEEHHHHHHHHEEEEEC EAEFGELELDRRKTKQIVYNLLANAVKFSEPGGWVTLAVRLVPASQAGLIDGDWPTYGFA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEE LASGDCEQFLELSVSDTGIGIAQSDMNKLFKAFSQIDSGLARKFEGTGLGLAMVKQLTEL EECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH HGGCVAVASVKDLGARFVVWLPIRSPESAEARWPRS CCCEEEEEEHHHCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure PTSPVDRPLVDAQSRAEKIVESRRQKILLKTGALQDAIFNSAYFSSIATDEHGVIQIFN CCCCCCCCCHHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEE VGAERMLGYHSEDVVDKITPADISDPAELIIRAAALSHELNTPITPGFEALVFKASRGIE CCHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH DIYELTYIRKDGSRLSAMVSVTSLRDSAETIIGYLLIGTDNTARKQEEEAQALLDQRLRD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHH QQFYTRSLIESNIDALMMTDPQGIISDVNKQMMALTGRTRDELIGAPCKNFFTDPASADA HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCHHH AIKRVLSEHKVSDYELTVRAYDGTETVVSYNAATFHDRDRKLKGVFAAARDVTERKRFER HHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHH TLEEKNIELEHASHMKSEFLATMSHELRTPLNAVIGFSEALRDGMVGDMTDAQRRYIGDI HHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FNSGQHLLSLINDILDLSKVEAGMMTLELESVDLDELLSNSLLIVREQAALQHIQLKLET HHCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCEEEEEHHHHHHHHEEEEEC EAEFGELELDRRKTKQIVYNLLANAVKFSEPGGWVTLAVRLVPASQAGLIDGDWPTYGFA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEE LASGDCEQFLELSVSDTGIGIAQSDMNKLFKAFSQIDSGLARKFEGTGLGLAMVKQLTEL EECCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH HGGCVAVASVKDLGARFVVWLPIRSPESAEARWPRS CCCEEEEEEHHHCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]