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The map label for this gene is yhbQ [C]

Identifier: 66044333

GI number: 66044333

Start: 1222555

End: 1222896

Strand: Direct

Name: yhbQ [C]

Synonym: Psyr_1080

Alternate gene names: 66044333

Gene position: 1222555-1222896 (Clockwise)

Preceding gene: 66044332

Following gene: 66044334

Centisome position: 20.06

GC content: 61.4

Gene sequence:

>342_bases
GTGCCTGAGGTCGCCTGCACCGCGAGTGCGTCGACTGCCGAACAGGCGGTCGGCAAACCCTGGTTTGTCTATCTGGTGCG
CGCTGCCAACGGCTCGCTGTACTGTGGCATCAGTGATGATCCGCAGCGGCGGTTCGCTGCGCACCAGAGGGGCAAGGGCG
CGCGTTTTTTCTCTTCGAGCCCGGCGATGGCGCTGGTCTACGTTGAACAATGGCCCAGCAAGGGCGAGGCGTTGCGCCAT
GAGCGGCTGATCAAGAAGCTGAAAAAAAGCGCCAAAGAGGCGTTGGCTGCCAGCTACGTAACGTCACCGATCCATGCGCG
TGATGGTGTCCCATCAGTTTGA

Upstream 100 bases:

>100_bases
CTGGGTTTGAAGGGCCTGTTGCTTGGCTGGACGCCTTTGGTGCGCAACGCCGTCAGGGCTCAGGCGCTCAAGGGCCTGAA
GACCTTTTCAGAGAGCCGCC

Downstream 100 bases:

>100_bases
GGTCGTGGGCGGGCAGGGTACTGCGGGTTAAGCTGTATTTTTCCCACGTGCACAGAGGCTGAACATGTCCGAGTTGATCC
TTCACCACTACCCCACGTCG

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPEVACTASASTAEQAVGKPWFVYLVRAANGSLYCGISDDPQRRFAAHQRGKGARFFSSSPAMALVYVEQWPSKGEALRH
ERLIKKLKKSAKEALAASYVTSPIHARDGVPSV

Sequences:

>Translated_113_residues
MPEVACTASASTAEQAVGKPWFVYLVRAANGSLYCGISDDPQRRFAAHQRGKGARFFSSSPAMALVYVEQWPSKGEALRH
ERLIKKLKKSAKEALAASYVTSPIHARDGVPSV
>Mature_112_residues
PEVACTASASTAEQAVGKPWFVYLVRAANGSLYCGISDDPQRRFAAHQRGKGARFFSSSPAMALVYVEQWPSKGEALRHE
RLIKKLKKSAKEALAASYVTSPIHARDGVPSV

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=78, Percent_Identity=42.3076923076923, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 12264; Mature: 12133

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVACTASASTAEQAVGKPWFVYLVRAANGSLYCGISDDPQRRFAAHQRGKGARFFSSS
CCCCCCCCCCCHHHHHHCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCEECCC
PAMALVYVEQWPSKGEALRHERLIKKLKKSAKEALAASYVTSPIHARDGVPSV
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PEVACTASASTAEQAVGKPWFVYLVRAANGSLYCGISDDPQRRFAAHQRGKGARFFSSS
CCCCCCCCCCHHHHHHCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCEECCC
PAMALVYVEQWPSKGEALRHERLIKKLKKSAKEALAASYVTSPIHARDGVPSV
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]