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The map label for this gene is ydhJ [H]

Identifier: 66044301

GI number: 66044301

Start: 1184228

End: 1185088

Strand: Direct

Name: ydhJ [H]

Synonym: Psyr_1048

Alternate gene names: 66044301

Gene position: 1184228-1185088 (Clockwise)

Preceding gene: 66044300

Following gene: 66044304

Centisome position: 19.43

GC content: 61.32

Gene sequence:

>861_bases
ATGAAAAAGTTCTTCAGTCTGTTTGCCACGTTGCTGGTGCTGGCAATCGCGCTCTGGATCGGTCGCGCGTTATGGGTCGA
CTACATGGATACGCCCTGGACCCGCGATGGTCGGGTACGCGCCGACATCATCAACGTGGCTGCCGATGTGTCCGGCACCG
TGGTCGATGTCCCGGTGCATGATAACCAGTGGGTGAAACGTGGCGATCTGCTGATGCAGATCGACCCGGAGCATTACCGG
ATCGCCGTGAAGCAGGCGCAGGCGTTGCTGGCTTCACGCAAGGCGACCTGGGAGATGCGCAAACTGAATGCCAGGCGGCG
TGCCGATATGGATGAGCTGGTCATCTCGGCAGAAAATCGTGACGACGCGAGCAACGTTGCCACCTCGGCCCTGGCCGATT
ACCAGTTGGCCCAGGCGCAACTGGAGGCGGCCGAACTCAACCTGTCCCGCACGCGGGTACTGGCGGCGGTGGACGGTTAC
GTCACCAACCTCAATGTGCATCGTGGTGACTATGCGCGCATCGGCGAAGCGAAGATGGCCGTGGTCGACATGAACTCGTT
CTGGGTCTACGGCTTCTTCGAGGAAACCAAGTTGCCGCACCTGAAAGTGGGCGACCCTGCGGATCTGCAACTGATGAGCG
GCGAGGTGCTCAAGGGCCATGTCGAAAGCATCGCCCGCGGCATCTACGACCGTGACAACCCGCAAAGCCGAGAACTGATC
GCCGACGTGAACCCGACCTTCAACTGGGTGCGCCTGGCCCAGCGCGTGCCGGTGCGTATCCACCTCGATCAAGTACCGCA
GGATGTGTTGCTGGCGGCGGGGATGACCTGCACGGTGATTGTCAGGCCGGTAGACGGCTGA

Upstream 100 bases:

>100_bases
TGGCACCCGGCCCTGCTGCGTCTGAGTCTGTTTATCTGCATCTTCGGCGCGTTGGCGCTGCCCCTTTATCGTTGACGCCT
GAGTCGGGAAAAATCTCTGG

Downstream 100 bases:

>100_bases
TACTTGAGGACGCAGAGCGTCCAGAACGGCATGCCAACGCGGAGCATTGGCACGATAGTGACAAGGCTCGGCTACAGATC
AGCGTTCAGCCCAAAGCGTT

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKFFSLFATLLVLAIALWIGRALWVDYMDTPWTRDGRVRADIINVAADVSGTVVDVPVHDNQWVKRGDLLMQIDPEHYR
IAVKQAQALLASRKATWEMRKLNARRRADMDELVISAENRDDASNVATSALADYQLAQAQLEAAELNLSRTRVLAAVDGY
VTNLNVHRGDYARIGEAKMAVVDMNSFWVYGFFEETKLPHLKVGDPADLQLMSGEVLKGHVESIARGIYDRDNPQSRELI
ADVNPTFNWVRLAQRVPVRIHLDQVPQDVLLAAGMTCTVIVRPVDG

Sequences:

>Translated_286_residues
MKKFFSLFATLLVLAIALWIGRALWVDYMDTPWTRDGRVRADIINVAADVSGTVVDVPVHDNQWVKRGDLLMQIDPEHYR
IAVKQAQALLASRKATWEMRKLNARRRADMDELVISAENRDDASNVATSALADYQLAQAQLEAAELNLSRTRVLAAVDGY
VTNLNVHRGDYARIGEAKMAVVDMNSFWVYGFFEETKLPHLKVGDPADLQLMSGEVLKGHVESIARGIYDRDNPQSRELI
ADVNPTFNWVRLAQRVPVRIHLDQVPQDVLLAAGMTCTVIVRPVDG
>Mature_286_residues
MKKFFSLFATLLVLAIALWIGRALWVDYMDTPWTRDGRVRADIINVAADVSGTVVDVPVHDNQWVKRGDLLMQIDPEHYR
IAVKQAQALLASRKATWEMRKLNARRRADMDELVISAENRDDASNVATSALADYQLAQAQLEAAELNLSRTRVLAAVDGY
VTNLNVHRGDYARIGEAKMAVVDMNSFWVYGFFEETKLPHLKVGDPADLQLMSGEVLKGHVESIARGIYDRDNPQSRELI
ADVNPTFNWVRLAQRVPVRIHLDQVPQDVLLAAGMTCTVIVRPVDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=282, Percent_Identity=45.3900709219858, Blast_Score=231, Evalue=3e-62,
Organism=Escherichia coli, GI1789637, Length=279, Percent_Identity=41.2186379928315, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1790519, Length=307, Percent_Identity=30.2931596091205, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1788711, Length=334, Percent_Identity=27.5449101796407, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789041, Length=302, Percent_Identity=26.158940397351, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32091; Mature: 32091

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFSLFATLLVLAIALWIGRALWVDYMDTPWTRDGRVRADIINVAADVSGTVVDVPVH
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEHHHEEHHHCCCCCEEEEECC
DNQWVKRGDLLMQIDPEHYRIAVKQAQALLASRKATWEMRKLNARRRADMDELVISAENR
CCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCC
DDASNVATSALADYQLAQAQLEAAELNLSRTRVLAAVDGYVTNLNVHRGDYARIGEAKMA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCEEEEEEEECCCCCCCCCCEEE
VVDMNSFWVYGFFEETKLPHLKVGDPADLQLMSGEVLKGHVESIARGIYDRDNPQSRELI
EEECCCEEEEEEECCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEE
ADVNPTFNWVRLAQRVPVRIHLDQVPQDVLLAAGMTCTVIVRPVDG
ECCCCCHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEEEEEEECCC
>Mature Secondary Structure
MKKFFSLFATLLVLAIALWIGRALWVDYMDTPWTRDGRVRADIINVAADVSGTVVDVPVH
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEHHHEEHHHCCCCCEEEEECC
DNQWVKRGDLLMQIDPEHYRIAVKQAQALLASRKATWEMRKLNARRRADMDELVISAENR
CCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCC
DDASNVATSALADYQLAQAQLEAAELNLSRTRVLAAVDGYVTNLNVHRGDYARIGEAKMA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCEEEEEEEECCCCCCCCCCEEE
VVDMNSFWVYGFFEETKLPHLKVGDPADLQLMSGEVLKGHVESIARGIYDRDNPQSRELI
EEECCCEEEEEEECCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEE
ADVNPTFNWVRLAQRVPVRIHLDQVPQDVLLAAGMTCTVIVRPVDG
ECCCCCHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]