| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fecA [H]
Identifier: 66044291
GI number: 66044291
Start: 1171497
End: 1173845
Strand: Reverse
Name: fecA [H]
Synonym: Psyr_1038
Alternate gene names: 66044291
Gene position: 1173845-1171497 (Counterclockwise)
Preceding gene: 66044292
Following gene: 66044290
Centisome position: 19.26
GC content: 62.41
Gene sequence:
>2349_bases ATGTCAGCCCGCCCTACCCAACTTTCGCCGCTGGTGCGTACATTGCGCCATGTCATTTTCGGCGCCAGCCTCTCGGTCGG CAGCCTGTCGATGGTGCAGGCCGCCGAGGTCGCACCCAAGGCGTATCACATTGCGCCAAGCGAGCTTGAAGCGGCGTTGA ACCAGTTCGGTCGTGAGTCCGGCGTGCTGATTTCCTATGGTTCGCAGATTACCAGCGGCCTGAAAAGCCGTGGCCTGGAA GGTCAGTACACGCCCGAGCAGGGCCTGAATGCCTTGCTCGAAGGCACCGGCCTGCAGGCCATGGCCGATGGCAATAACGG CTTCACCCTGCAACCGGCCAATACCGCTGGCGCGCCGATCGAGCTGGGTGTCTCCACGGTGGTCGGTGACTGGCTGGGCG CTGCGCAGCAAACCAACGTTTTCGAGCATCCGGGCGCGCGTGACGTGATTCGTCGTGAGGAATTCGAGCGGGTCGGTGCG ACATCGGCGCGTGAAGTGCTCAATCGCATTCCGGGCGTCAATGCGCCGGACAACAACGGCACCGGCAGCCATGACATGGC GCTGAACTTCGGCATTCGCGGCCTCAATCCACGCCTGGCGTCGCGCTCCACCGTGCTGATGGACGGCATTCCGGTACCAT TCGCGCCCTACGGCCAGCCGCAACTGTCGTTTGCGCCGATCAGCATGGGCAACATGGACGCAGTCGACGTGGTGCGTGGC GGTGGTGCAGTGCGTTACGGTCCGCAGAACGTGGGCGGCATCGTCAACTTCGTGACCCGCGCGATCCCCGATACCCCGAC GCTCAAGGGCGGCATCCAGACCGAGACCAGCCCGTCGTCCAGCCACGACGGCTTCAAGACCACCGGCAACCTGCTGGCAG GCGGTACCGCGGACAACGGCCTGGGCGGCGCGATTCTGTATTCCGGCGTGCGCGGCGGCGACTGGCGCGAGCACAGCGAC ACCGAAATCGACGACCTGATTCTCAAGGGCAAATACCAGATCGACGACGCCAACAGCCTCAACGCCATGGCGCAGTACTA CGATGGCGAAGCACAGATGCCTGGAGGCCTCAGCGTCGCGGACTACGATGCCGACCCGTACCAGTCGACACGCCTGAAGG ACAAGTTCTGGGGCCGTCGCACCCTGTTCAACTTCGGCTATCGCTATGAGCAGGACGCGCGCGTCTTCACCGCCAACACG TTCTTCACCAAGACCTTGCGCAGCGGCTATCTGGATCAGGGCAGCTTCGTTTCCCTGTCGCCCCGCGAATACTGGGTGCG CGGCCTGGAAACACGCTTCTCGCAAGGCTTTGCGCTGGGCGAGACCTGGCATGAAGTCGGCGTTGGCTACCGCTACGTCA ACGAGGCCGGTCATGAGTTGCGCTATCGCGAACCGGTGACGGGCGAGCTGCCAACCACCGCCAGTCGCAACGACCGCGAC ACACGCGGCGCGACCGAAGCGCATGCGTTCTACATCGACGACCGCATCGATATCGGCAAGTGGACCATCACGCCGGGCAT TCGCTACGAGATGATCGACACCGCGCAGAACAACAACCTGACCAACGCCCGCTACCAGGGCGACTACAGCACCGCACTGC CCGCGTTGAACGTGCTTTACCACCTGACCGACACCTGGAACCTGTACGCCAACACCGAAGGCTCGTTCGGCAGTGTGCAG TACAGCCAGATGCCCAACCGCGTCACCGGCGATGAAGTCAAACCGGAAAAAGCCCGCACCTGGGAACTGGGCACACGCTA CGACAACGGCAACCTGCGGGCCGAGATCGGCGCGTTCTTGATCAATTTCGACAACCAGTACGACAGCAACCAGACCAATG ACACGGTTATCGCACGCGGCGAGACGCGTCATCAGGGCATCGAGACCAGCGTCAACTATGCGCTGGAGGGCCTGAGCCCG GTGCTGGCCGGCTACGATGTCTACGCGACCTACGCCTTCGTCGACGCCACGATTCGCGAAGACGGCCCGAACAAGGGCAA TCGCGTGCCGTTCTCGTCAAAGCACAAGGGAACCATGGGCGTCAGCTACACCGAAGGGCCGTGGAAGCTTAATTTCGACA GCGCCTTCCAGAGCGACCAGTTTGCCGACAACGCCAATACCTCGACTGAAAGCGCCGATGGCAGCACCGGCAAGATCCCT GGGTACATGCTGTTCAGCACCCGCGCCAACTACGATTTCGGCCCGCAACTGTCTGACCTCAACGTAGCGGTCGGGATGAA GAACATCTTCAACCGCCAGTACTACACCCGCTCGTTCGACGACAACAACCGCGGCAAATACGTCGGCGAACCACGCACGG TGTACGTACAGACATCGGTCGCGTTCTAG
Upstream 100 bases:
>100_bases CTGGCCGGCTAAAATTTTTCAAAAAGCGTGAGCCGTTTTTTGATCCTCGCGTGACAGACAGGGAAAGCCTCTCTCAACCT TCCGGTCAAAGGACTCCTGC
Downstream 100 bases:
>100_bases TTTCGGACGCCAGAGCGCGAGAGCAGTGTTCTTCCGGACACCTCTCGTTCCTCACTATCCGCGTGGGAATGCCGTTCTGG ACGCTCTGCGTCCGCTGCTG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 782; Mature: 781
Protein sequence:
>782_residues MSARPTQLSPLVRTLRHVIFGASLSVGSLSMVQAAEVAPKAYHIAPSELEAALNQFGRESGVLISYGSQITSGLKSRGLE GQYTPEQGLNALLEGTGLQAMADGNNGFTLQPANTAGAPIELGVSTVVGDWLGAAQQTNVFEHPGARDVIRREEFERVGA TSAREVLNRIPGVNAPDNNGTGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRG GGAVRYGPQNVGGIVNFVTRAIPDTPTLKGGIQTETSPSSSHDGFKTTGNLLAGGTADNGLGGAILYSGVRGGDWREHSD TEIDDLILKGKYQIDDANSLNAMAQYYDGEAQMPGGLSVADYDADPYQSTRLKDKFWGRRTLFNFGYRYEQDARVFTANT FFTKTLRSGYLDQGSFVSLSPREYWVRGLETRFSQGFALGETWHEVGVGYRYVNEAGHELRYREPVTGELPTTASRNDRD TRGATEAHAFYIDDRIDIGKWTITPGIRYEMIDTAQNNNLTNARYQGDYSTALPALNVLYHLTDTWNLYANTEGSFGSVQ YSQMPNRVTGDEVKPEKARTWELGTRYDNGNLRAEIGAFLINFDNQYDSNQTNDTVIARGETRHQGIETSVNYALEGLSP VLAGYDVYATYAFVDATIREDGPNKGNRVPFSSKHKGTMGVSYTEGPWKLNFDSAFQSDQFADNANTSTESADGSTGKIP GYMLFSTRANYDFGPQLSDLNVAVGMKNIFNRQYYTRSFDDNNRGKYVGEPRTVYVQTSVAF
Sequences:
>Translated_782_residues MSARPTQLSPLVRTLRHVIFGASLSVGSLSMVQAAEVAPKAYHIAPSELEAALNQFGRESGVLISYGSQITSGLKSRGLE GQYTPEQGLNALLEGTGLQAMADGNNGFTLQPANTAGAPIELGVSTVVGDWLGAAQQTNVFEHPGARDVIRREEFERVGA TSAREVLNRIPGVNAPDNNGTGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRG GGAVRYGPQNVGGIVNFVTRAIPDTPTLKGGIQTETSPSSSHDGFKTTGNLLAGGTADNGLGGAILYSGVRGGDWREHSD TEIDDLILKGKYQIDDANSLNAMAQYYDGEAQMPGGLSVADYDADPYQSTRLKDKFWGRRTLFNFGYRYEQDARVFTANT FFTKTLRSGYLDQGSFVSLSPREYWVRGLETRFSQGFALGETWHEVGVGYRYVNEAGHELRYREPVTGELPTTASRNDRD TRGATEAHAFYIDDRIDIGKWTITPGIRYEMIDTAQNNNLTNARYQGDYSTALPALNVLYHLTDTWNLYANTEGSFGSVQ YSQMPNRVTGDEVKPEKARTWELGTRYDNGNLRAEIGAFLINFDNQYDSNQTNDTVIARGETRHQGIETSVNYALEGLSP VLAGYDVYATYAFVDATIREDGPNKGNRVPFSSKHKGTMGVSYTEGPWKLNFDSAFQSDQFADNANTSTESADGSTGKIP GYMLFSTRANYDFGPQLSDLNVAVGMKNIFNRQYYTRSFDDNNRGKYVGEPRTVYVQTSVAF >Mature_781_residues SARPTQLSPLVRTLRHVIFGASLSVGSLSMVQAAEVAPKAYHIAPSELEAALNQFGRESGVLISYGSQITSGLKSRGLEG QYTPEQGLNALLEGTGLQAMADGNNGFTLQPANTAGAPIELGVSTVVGDWLGAAQQTNVFEHPGARDVIRREEFERVGAT SAREVLNRIPGVNAPDNNGTGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGG GAVRYGPQNVGGIVNFVTRAIPDTPTLKGGIQTETSPSSSHDGFKTTGNLLAGGTADNGLGGAILYSGVRGGDWREHSDT EIDDLILKGKYQIDDANSLNAMAQYYDGEAQMPGGLSVADYDADPYQSTRLKDKFWGRRTLFNFGYRYEQDARVFTANTF FTKTLRSGYLDQGSFVSLSPREYWVRGLETRFSQGFALGETWHEVGVGYRYVNEAGHELRYREPVTGELPTTASRNDRDT RGATEAHAFYIDDRIDIGKWTITPGIRYEMIDTAQNNNLTNARYQGDYSTALPALNVLYHLTDTWNLYANTEGSFGSVQY SQMPNRVTGDEVKPEKARTWELGTRYDNGNLRAEIGAFLINFDNQYDSNQTNDTVIARGETRHQGIETSVNYALEGLSPV LAGYDVYATYAFVDATIREDGPNKGNRVPFSSKHKGTMGVSYTEGPWKLNFDSAFQSDQFADNANTSTESADGSTGKIPG YMLFSTRANYDFGPQLSDLNVAVGMKNIFNRQYYTRSFDDNNRGKYVGEPRTVYVQTSVAF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=778, Percent_Identity=61.5681233933162, Blast_Score=973, Evalue=0.0, Organism=Escherichia coli, GI1787723, Length=707, Percent_Identity=23.6209335219236, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1790405, Length=127, Percent_Identity=34.6456692913386, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 85465; Mature: 85334
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARPTQLSPLVRTLRHVIFGASLSVGSLSMVQAAEVAPKAYHIAPSELEAALNQFGRES CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCC GVLISYGSQITSGLKSRGLEGQYTPEQGLNALLEGTGLQAMADGNNGFTLQPANTAGAPI CEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCE ELGVSTVVGDWLGAAQQTNVFEHPGARDVIRREEFERVGATSAREVLNRIPGVNAPDNNG EECHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC TGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRG CCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHEEEC GGAVRYGPQNVGGIVNFVTRAIPDTPTLKGGIQTETSPSSSHDGFKTTGNLLAGGTADNG CCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC LGGAILYSGVRGGDWREHSDTEIDDLILKGKYQIDDANSLNAMAQYYDGEAQMPGGLSVA CCCCEEECCCCCCCCCCCCCCCHHHEEEECEEEECCCCHHHHHHHHCCCCCCCCCCCEEE DYDADPYQSTRLKDKFWGRRTLFNFGYRYEQDARVFTANTFFTKTLRSGYLDQGSFVSLS CCCCCCCCCCCCHHHHCCCHHHHHCCCEECCCCEEEEEHHHHHHHHHHCCCCCCCEEEEC PREYWVRGLETRFSQGFALGETWHEVGVGYRYVNEAGHELRYREPVTGELPTTASRNDRD HHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEHHHCCCCEEECCCCCCCCCCCCCCCCCC TRGATEAHAFYIDDRIDIGKWTITPGIRYEMIDTAQNNNLTNARYQGDYSTALPALNVLY CCCCCCEEEEEEECCEECCEEEECCCCEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHH HLTDTWNLYANTEGSFGSVQYSQMPNRVTGDEVKPEKARTWELGTRYDNGNLRAEIGAFL EECCCEEEEECCCCCCCCEEHHHCCCCCCCCCCCCCCCCEEECCCEECCCCEEEEEEEEE INFDNQYDSNQTNDTVIARGETRHQGIETSVNYALEGLSPVLAGYDVYATYAFVDATIRE EEECCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHCCHHHHHCCHHEEEEEEEEEEECC DGPNKGNRVPFSSKHKGTMGVSYTEGPWKLNFDSAFQSDQFADNANTSTESADGSTGKIP CCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GYMLFSTRANYDFGPQLSDLNVAVGMKNIFNRQYYTRSFDDNNRGKYVGEPRTVYVQTSV EEEEEEECCCCCCCCCCCCCEEEECHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEEE AF CC >Mature Secondary Structure SARPTQLSPLVRTLRHVIFGASLSVGSLSMVQAAEVAPKAYHIAPSELEAALNQFGRES CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCC GVLISYGSQITSGLKSRGLEGQYTPEQGLNALLEGTGLQAMADGNNGFTLQPANTAGAPI CEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCE ELGVSTVVGDWLGAAQQTNVFEHPGARDVIRREEFERVGATSAREVLNRIPGVNAPDNNG EECHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC TGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRG CCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHEEEC GGAVRYGPQNVGGIVNFVTRAIPDTPTLKGGIQTETSPSSSHDGFKTTGNLLAGGTADNG CCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC LGGAILYSGVRGGDWREHSDTEIDDLILKGKYQIDDANSLNAMAQYYDGEAQMPGGLSVA CCCCEEECCCCCCCCCCCCCCCHHHEEEECEEEECCCCHHHHHHHHCCCCCCCCCCCEEE DYDADPYQSTRLKDKFWGRRTLFNFGYRYEQDARVFTANTFFTKTLRSGYLDQGSFVSLS CCCCCCCCCCCCHHHHCCCHHHHHCCCEECCCCEEEEEHHHHHHHHHHCCCCCCCEEEEC PREYWVRGLETRFSQGFALGETWHEVGVGYRYVNEAGHELRYREPVTGELPTTASRNDRD HHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEHHHCCCCEEECCCCCCCCCCCCCCCCCC TRGATEAHAFYIDDRIDIGKWTITPGIRYEMIDTAQNNNLTNARYQGDYSTALPALNVLY CCCCCCEEEEEEECCEECCEEEECCCCEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHH HLTDTWNLYANTEGSFGSVQYSQMPNRVTGDEVKPEKARTWELGTRYDNGNLRAEIGAFL EECCCEEEEECCCCCCCCEEHHHCCCCCCCCCCCCCCCCEEECCCEECCCCEEEEEEEEE INFDNQYDSNQTNDTVIARGETRHQGIETSVNYALEGLSPVLAGYDVYATYAFVDATIRE EEECCCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHCCHHHHHCCHHEEEEEEEEEEECC DGPNKGNRVPFSSKHKGTMGVSYTEGPWKLNFDSAFQSDQFADNANTSTESADGSTGKIP CCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GYMLFSTRANYDFGPQLSDLNVAVGMKNIFNRQYYTRSFDDNNRGKYVGEPRTVYVQTSV EEEEEEECCCCCCCCCCCCCEEEECHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEEE AF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]