| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66044288
Identifier: 66044288
GI number: 66044288
Start: 1168967
End: 1169299
Strand: Reverse
Name: 66044288
Synonym: Psyr_1035
Alternate gene names: NA
Gene position: 1169299-1168967 (Counterclockwise)
Preceding gene: 66044289
Following gene: 66044286
Centisome position: 19.19
GC content: 60.66
Gene sequence:
>333_bases ATGTATTTACGTTATGGGGTATTGATCGCATCACTTGCGATCGCGTCAGGCTGTGTCGAGGAGCGTGTAGTCCATGAACG ACCGCACGTCCATCATGAATACGTCGAAGAAGTGATCGCGCCGCAACCGCCACCCGAACGCGTCGTCGAGGTGGAACCGG CCCCTCGCCCAGGCTATGTATGGGCACGCGGTTACTGGCACTGGAACGGCCAGCGTTTCGTGCCGGTGCATGGCCACTGG GAAGCCGAGCGACCCGGCTATCACTATGTGCATCCGCACTGGGAAAGCGCTGGTGATGGCTGGCACTGGCGTGCCGGGGT CTGGCTGAACTGA
Upstream 100 bases:
>100_bases CAGATACATCCTGCTACAACAATCCTTGCGCAGAAACATTCGAGCGACTGGGCACTGAGTTCAGCGCCACTGCACCTGCG GGTTATTCCGAGGAGGCAAC
Downstream 100 bases:
>100_bases TTGCCTTCTTCTATAAGCAGCGTGCTGGCGGCATCTTGCACAGATGCCGCCATTGCCTAGATCAGATTTCGCCCTTCTCT TCCGTCACCGCGCCTTTGAC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MYLRYGVLIASLAIASGCVEERVVHERPHVHHEYVEEVIAPQPPPERVVEVEPAPRPGYVWARGYWHWNGQRFVPVHGHW EAERPGYHYVHPHWESAGDGWHWRAGVWLN
Sequences:
>Translated_110_residues MYLRYGVLIASLAIASGCVEERVVHERPHVHHEYVEEVIAPQPPPERVVEVEPAPRPGYVWARGYWHWNGQRFVPVHGHW EAERPGYHYVHPHWESAGDGWHWRAGVWLN >Mature_110_residues MYLRYGVLIASLAIASGCVEERVVHERPHVHHEYVEEVIAPQPPPERVVEVEPAPRPGYVWARGYWHWNGQRFVPVHGHW EAERPGYHYVHPHWESAGDGWHWRAGVWLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12914; Mature: 12914
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLRYGVLIASLAIASGCVEERVVHERPHVHHEYVEEVIAPQPPPERVVEVEPAPRPGYV CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEE WARGYWHWNGQRFVPVHGHWEAERPGYHYVHPHWESAGDGWHWRAGVWLN EECEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MYLRYGVLIASLAIASGCVEERVVHERPHVHHEYVEEVIAPQPPPERVVEVEPAPRPGYV CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEE WARGYWHWNGQRFVPVHGHWEAERPGYHYVHPHWESAGDGWHWRAGVWLN EECEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA