| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yjbA [C]
Identifier: 66044287
GI number: 66044287
Start: 1168417
End: 1168905
Strand: Direct
Name: yjbA [C]
Synonym: Psyr_1034
Alternate gene names: 66044287
Gene position: 1168417-1168905 (Clockwise)
Preceding gene: 66044279
Following gene: 66044295
Centisome position: 19.17
GC content: 56.24
Gene sequence:
>489_bases ATGGGAAACAAATGGGCAGTAAAGATAAGACACCGCGTGCATGCGCAGGCCGAGTCGCTGGGCAACCTGTGTGTGGAGAG CTTCCACTTTCTCGCCCTGTTCGCGATCGGCGCGATCACTGCATGGGCGTCAGTGGTTGCATTCCTGGGGATGGTCGAGA AAGGCAACGTCACGGTCGATGACATCCTGCTGCTGTTCATCTATCTCGAGCTGGGGGCGATGACCGGGATTTATTTCAAG ACCAACCACATGCCCGTGCGCTTCCTCATCTATGTGGCGATCACTGCACTGACGCGGCTGCTGATTTCCGACGTGTCCCA CCACAACCCACCGGATATCGGCATCATCTACCTGTGTGGCGGCATTTTGTTGCTGGCGTTTGCGATTCTGGTGGTGCGCT ATGCGTCTTACAAATACCCTTCAGCGAAGATTCCCGACTCGTCCAGCACCGTCAAAGGCGCGGTGACGGAAGAGAAGGGC GAAATCTGA
Upstream 100 bases:
>100_bases CCTATGGCCCTGTTCCTGCTTTAAAAAGCAGGCCACAACAGTGTCACACGTACACGGCATCATCCGGTCGGCATAAACGA AGGTTCAGAGGTAGCGCTTC
Downstream 100 bases:
>100_bases TCTAGGCAATGGCGGCATCTGTGCAAGATGCCGCCAGCACGCTGCTTATAGAAGAAGGCAATCAGTTCAGCCAGACCCCG GCACGCCAGTGCCAGCCATC
Product: phosphate-starvation-inducible E
Products: NA
Alternate protein names: PsiE Family Protein; Phosphate-Starvation-Inducible E Protein; Phosphate-Starvation-Inducible E Protein PsiE
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGNKWAVKIRHRVHAQAESLGNLCVESFHFLALFAIGAITAWASVVAFLGMVEKGNVTVDDILLLFIYLELGAMTGIYFK TNHMPVRFLIYVAITALTRLLISDVSHHNPPDIGIIYLCGGILLLAFAILVVRYASYKYPSAKIPDSSSTVKGAVTEEKG EI
Sequences:
>Translated_162_residues MGNKWAVKIRHRVHAQAESLGNLCVESFHFLALFAIGAITAWASVVAFLGMVEKGNVTVDDILLLFIYLELGAMTGIYFK TNHMPVRFLIYVAITALTRLLISDVSHHNPPDIGIIYLCGGILLLAFAILVVRYASYKYPSAKIPDSSSTVKGAVTEEKG EI >Mature_161_residues GNKWAVKIRHRVHAQAESLGNLCVESFHFLALFAIGAITAWASVVAFLGMVEKGNVTVDDILLLFIYLELGAMTGIYFKT NHMPVRFLIYVAITALTRLLISDVSHHNPPDIGIIYLCGGILLLAFAILVVRYASYKYPSAKIPDSSSTVKGAVTEEKGE I
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17754; Mature: 17623
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKWAVKIRHRVHAQAESLGNLCVESFHFLALFAIGAITAWASVVAFLGMVEKGNVTVD CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH DILLLFIYLELGAMTGIYFKTNHMPVRFLIYVAITALTRLLISDVSHHNPPDIGIIYLCG HHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH GILLLAFAILVVRYASYKYPSAKIPDSSSTVKGAVTEEKGEI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GNKWAVKIRHRVHAQAESLGNLCVESFHFLALFAIGAITAWASVVAFLGMVEKGNVTVD CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH DILLLFIYLELGAMTGIYFKTNHMPVRFLIYVAITALTRLLISDVSHHNPPDIGIIYLCG HHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH GILLLAFAILVVRYASYKYPSAKIPDSSSTVKGAVTEEKGEI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA