| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is wecB [H]
Identifier: 66044285
GI number: 66044285
Start: 1165785
End: 1167035
Strand: Reverse
Name: wecB [H]
Synonym: Psyr_1032
Alternate gene names: 66044285
Gene position: 1167035-1165785 (Counterclockwise)
Preceding gene: 66044286
Following gene: 66044284
Centisome position: 19.15
GC content: 61.47
Gene sequence:
>1251_bases ATGGCTGGTCTGCACCCCAGAATGAAGGTCCTTTCCATTTTCGGTACTCGTCCGGAGGCCATCAAAATGGCTCCTCTGGT CAGAGCACTGGCTGCAGAGCCGGGTATCGACTCAAGAATCTGCATTACCGGGCAGCATCAAAGCATGCTGCAACAGGTGC TGGACATGTTCGAGCTCAAAGCCGACTACAGCCTTGATGTGATGCGCCCGGATCAGACGCTGAACTCGCTGACCGCTGCG CTTTACGCGGCGATCGACCCGATTCTGGACGAGATGAAACCGGACAGGGTGCTGGTTCACGGCGACACCACATCAGCAAT GGTGGCGGCCATGTCGGCCTTTCATCGCCGGATCCCCATCGGCCACGTCGAAGCAGGTCTGCGCACCGGTGACATCCGTC AGCCATGGCCTGAAGAGATGAACCGTCGTTGCATCGATCTGATTTCCGATCACCTGTTCGCCCCCACCGCCGAGTCGCGC CGCAACGTGCTGGGCGAGCGCCTGCAGGGTATCTCGTTCGTGACCGGCAACACCGTGATCGACGCCCTGCACCTGACGGC ACAGCGAATCGACAGCAATCGCCAACTGCGCCATGCACTTGATCGCCAGTTTTCGTTCCTGGTGCCCGAGCGCCGGGTGT TGGTGGTGACCGGGCATCGTCGCGAGAACTTCGGCGACGGCTTCCTGAACATCTGCAAGGCGCTGGGCGAACTGGCCAGA CGCGATGACATACAGATCGTTTACCCGGTGCACCTGAATCCCAATGTACTTGGGCCGGTGACCGAGCACCTGGGCGATCT GCCCAACGTGCACCTGATCAAGCCGCTGGACTACCTGTCGTTCGTGCGCCTGATGCAACGCGCTCACGTCATCCTCACCG ATTCCGGTGGCGTGCAGGAAGAAGCGCCGTCGCTGGGCAAACCGGTATTGGTCATGCGCGATGTCACCGAGCGCCCGGAA GCGGTCGCGGCGGGCACTGTGCGCCTGGTGGGCACCGAGACGGACGCCATCATTCGCGGTGTGAACGCCCTGTTTGACGA TGATGCGCTGTGGCAGAACGCCTCCCGTGCAGCCAACCCCTATGGCGACGGCAAAGCCAGTTCACGGATCGTCGATGCCC TGATGGGCCGTCCGGTGGATGAGTTTGTCGCCGAGCTGCCGCGTCAGCGCCAGGACCCGGTGGACAGACACCTGGATACA CGAATCAAGCCCCAGCATGAACATGCAGAGTTGCGCTCGATGGCCAGTTAG
Upstream 100 bases:
>100_bases ATCTTTCCGCCCGAGAAACTCATCAACTCGCAAGCTGACCACGCTGCTCTCAGTCTGGTTTTTGCTGCCGTGCGACGCGC TCAGGGCGCGGGAGGAAATA
Downstream 100 bases:
>100_bases CCAAAAGGACGCGCAGGTAGCGCAAACGAACCCCAAAAAAATCCGCAGGAAGCAGTCCGCAAACGATACGGGCACCCGGT TCAGACCGAGTGCCCGAAAA
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MAGLHPRMKVLSIFGTRPEAIKMAPLVRALAAEPGIDSRICITGQHQSMLQQVLDMFELKADYSLDVMRPDQTLNSLTAA LYAAIDPILDEMKPDRVLVHGDTTSAMVAAMSAFHRRIPIGHVEAGLRTGDIRQPWPEEMNRRCIDLISDHLFAPTAESR RNVLGERLQGISFVTGNTVIDALHLTAQRIDSNRQLRHALDRQFSFLVPERRVLVVTGHRRENFGDGFLNICKALGELAR RDDIQIVYPVHLNPNVLGPVTEHLGDLPNVHLIKPLDYLSFVRLMQRAHVILTDSGGVQEEAPSLGKPVLVMRDVTERPE AVAAGTVRLVGTETDAIIRGVNALFDDDALWQNASRAANPYGDGKASSRIVDALMGRPVDEFVAELPRQRQDPVDRHLDT RIKPQHEHAELRSMAS
Sequences:
>Translated_416_residues MAGLHPRMKVLSIFGTRPEAIKMAPLVRALAAEPGIDSRICITGQHQSMLQQVLDMFELKADYSLDVMRPDQTLNSLTAA LYAAIDPILDEMKPDRVLVHGDTTSAMVAAMSAFHRRIPIGHVEAGLRTGDIRQPWPEEMNRRCIDLISDHLFAPTAESR RNVLGERLQGISFVTGNTVIDALHLTAQRIDSNRQLRHALDRQFSFLVPERRVLVVTGHRRENFGDGFLNICKALGELAR RDDIQIVYPVHLNPNVLGPVTEHLGDLPNVHLIKPLDYLSFVRLMQRAHVILTDSGGVQEEAPSLGKPVLVMRDVTERPE AVAAGTVRLVGTETDAIIRGVNALFDDDALWQNASRAANPYGDGKASSRIVDALMGRPVDEFVAELPRQRQDPVDRHLDT RIKPQHEHAELRSMAS >Mature_415_residues AGLHPRMKVLSIFGTRPEAIKMAPLVRALAAEPGIDSRICITGQHQSMLQQVLDMFELKADYSLDVMRPDQTLNSLTAAL YAAIDPILDEMKPDRVLVHGDTTSAMVAAMSAFHRRIPIGHVEAGLRTGDIRQPWPEEMNRRCIDLISDHLFAPTAESRR NVLGERLQGISFVTGNTVIDALHLTAQRIDSNRQLRHALDRQFSFLVPERRVLVVTGHRRENFGDGFLNICKALGELARR DDIQIVYPVHLNPNVLGPVTEHLGDLPNVHLIKPLDYLSFVRLMQRAHVILTDSGGVQEEAPSLGKPVLVMRDVTERPEA VAAGTVRLVGTETDAIIRGVNALFDDDALWQNASRAANPYGDGKASSRIVDALMGRPVDEFVAELPRQRQDPVDRHLDTR IKPQHEHAELRSMAS
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=369, Percent_Identity=56.0975609756098, Blast_Score=407, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 46268; Mature: 46137
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLHPRMKVLSIFGTRPEAIKMAPLVRALAAEPGIDSRICITGQHQSMLQQVLDMFELK CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHC ADYSLDVMRPDQTLNSLTAALYAAIDPILDEMKPDRVLVHGDTTSAMVAAMSAFHRRIPI CCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCC GHVEAGLRTGDIRQPWPEEMNRRCIDLISDHLFAPTAESRRNVLGERLQGISFVTGNTVI CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHH DALHLTAQRIDSNRQLRHALDRQFSFLVPERRVLVVTGHRRENFGDGFLNICKALGELAR HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC RDDIQIVYPVHLNPNVLGPVTEHLGDLPNVHLIKPLDYLSFVRLMQRAHVILTDSGGVQE CCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEECHHHHHHHHHHHHHCEEEEECCCCCCC EAPSLGKPVLVMRDVTERPEAVAAGTVRLVGTETDAIIRGVNALFDDDALWQNASRAANP CCCCCCCCEEEECCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHCCHHHHHCHHHCCCC YGDGKASSRIVDALMGRPVDEFVAELPRQRQDPVDRHLDTRIKPQHEHAELRSMAS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AGLHPRMKVLSIFGTRPEAIKMAPLVRALAAEPGIDSRICITGQHQSMLQQVLDMFELK CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHC ADYSLDVMRPDQTLNSLTAALYAAIDPILDEMKPDRVLVHGDTTSAMVAAMSAFHRRIPI CCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCC GHVEAGLRTGDIRQPWPEEMNRRCIDLISDHLFAPTAESRRNVLGERLQGISFVTGNTVI CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHH DALHLTAQRIDSNRQLRHALDRQFSFLVPERRVLVVTGHRRENFGDGFLNICKALGELAR HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC RDDIQIVYPVHLNPNVLGPVTEHLGDLPNVHLIKPLDYLSFVRLMQRAHVILTDSGGVQE CCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEECHHHHHHHHHHHHHCEEEEECCCCCCC EAPSLGKPVLVMRDVTERPEAVAAGTVRLVGTETDAIIRGVNALFDDDALWQNASRAANP CCCCCCCCEEEECCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHCCHHHHHCHHHCCCC YGDGKASSRIVDALMGRPVDEFVAELPRQRQDPVDRHLDTRIKPQHEHAELRSMAS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]