| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044275
Identifier: 66044275
GI number: 66044275
Start: 1153512
End: 1154078
Strand: Reverse
Name: 66044275
Synonym: Psyr_1022
Alternate gene names: NA
Gene position: 1154078-1153512 (Counterclockwise)
Preceding gene: 66044276
Following gene: 66044274
Centisome position: 18.94
GC content: 62.96
Gene sequence:
>567_bases ATGTCTACCTCACCCGTCACCTTGATGGTTGCCCGCCGCGTGGCGCAGGGTCGTTACCATGAAATGATGGCCTGGCTGCA CGAAGGCGAACAGTTGGCCACGGACTTTCCGGGGTATCTGGGTTCAGGGGTACTGGCCCCCCCGCCCGGCGATGACGAAT TTCAGATCATTTTCCGCTTCACCGATGAGCACACCATGCACGCCTGGGAGCATTCCGCCTCTCGGCGCTCCTGGCTGGTG CGCGGCAGCGGTCTTTTCGCACAACCCTCGGAGCATCGGGTCAGCGGTATCGACGGCTGGTTCGGCGCAATCGATCAGCG CCCGCCACGCTGGAAACAGGCCGTCGCGATCTGGCTGGCGTTCTTCCCCGTGTCGCTGATCTTCAACTTTCTGCTGGGCC CGTTGCTCAATCATCTGGACCTGTTGCCGCGCATCATGATCAGCACCGCGGTGCTCACCCCGCTGATGGTCTACCTGTTC ATCCCGCTGTCCACGCGCCTGCTGGCACCCTGGCTACAGAGCACGCCTGCACCGGCACGCCCGACGCAATCACCTTCCCC TCGCTAA
Upstream 100 bases:
>100_bases CTTGCTTGCTGTTCACGTGAAGCTGTCGCTATCCACCATCCCGGATCGCGGCATGTGACCTCCCTACCCGGGAATTTCAC GCCTCTACCGGAGATATACA
Downstream 100 bases:
>100_bases GCTCATAAAGACCTGTACACCCCCTACCCTTCGGTACAGGTCTTGGTCGCTCCTCGCTCCCTCTCATTTCCCCGGCCATC CCGTGCCCAGCGGCTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF 2 [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSTSPVTLMVARRVAQGRYHEMMAWLHEGEQLATDFPGYLGSGVLAPPPGDDEFQIIFRFTDEHTMHAWEHSASRRSWLV RGSGLFAQPSEHRVSGIDGWFGAIDQRPPRWKQAVAIWLAFFPVSLIFNFLLGPLLNHLDLLPRIMISTAVLTPLMVYLF IPLSTRLLAPWLQSTPAPARPTQSPSPR
Sequences:
>Translated_188_residues MSTSPVTLMVARRVAQGRYHEMMAWLHEGEQLATDFPGYLGSGVLAPPPGDDEFQIIFRFTDEHTMHAWEHSASRRSWLV RGSGLFAQPSEHRVSGIDGWFGAIDQRPPRWKQAVAIWLAFFPVSLIFNFLLGPLLNHLDLLPRIMISTAVLTPLMVYLF IPLSTRLLAPWLQSTPAPARPTQSPSPR >Mature_187_residues STSPVTLMVARRVAQGRYHEMMAWLHEGEQLATDFPGYLGSGVLAPPPGDDEFQIIFRFTDEHTMHAWEHSASRRSWLVR GSGLFAQPSEHRVSGIDGWFGAIDQRPPRWKQAVAIWLAFFPVSLIFNFLLGPLLNHLDLLPRIMISTAVLTPLMVYLFI PLSTRLLAPWLQSTPAPARPTQSPSPR
Specific function: Unknown
COG id: COG3224
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21183; Mature: 21052
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSPVTLMVARRVAQGRYHEMMAWLHEGEQLATDFPGYLGSGVLAPPPGDDEFQIIFRF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEE TDEHTMHAWEHSASRRSWLVRGSGLFAQPSEHRVSGIDGWFGAIDQRPPRWKQAVAIWLA CCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHH FFPVSLIFNFLLGPLLNHLDLLPRIMISTAVLTPLMVYLFIPLSTRLLAPWLQSTPAPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTQSPSPR CCCCCCCC >Mature Secondary Structure STSPVTLMVARRVAQGRYHEMMAWLHEGEQLATDFPGYLGSGVLAPPPGDDEFQIIFRF CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEE TDEHTMHAWEHSASRRSWLVRGSGLFAQPSEHRVSGIDGWFGAIDQRPPRWKQAVAIWLA CCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHH FFPVSLIFNFLLGPLLNHLDLLPRIMISTAVLTPLMVYLFIPLSTRLLAPWLQSTPAPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTQSPSPR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7937823 [H]