| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is mgtA [H]
Identifier: 66044265
GI number: 66044265
Start: 1146154
End: 1147374
Strand: Reverse
Name: mgtA [H]
Synonym: Psyr_1012
Alternate gene names: 66044265
Gene position: 1147374-1146154 (Counterclockwise)
Preceding gene: 66044266
Following gene: 66044261
Centisome position: 18.83
GC content: 62.49
Gene sequence:
>1221_bases ATGAGCCAAATTCTTAATGTCACCCTGATCACTGAAACCTTTACTCCCGAGATCAACGGCGTCGCCAATACCCTGGGGCG GCTGTGTGAAGGGTTGCGGTTGCGTGGGCATCGGGTCGAGCTGGTCCGGCCACGTCAGAATGACGAGACCGGCGCGGGCA CTGCAGAGGACCTGCTGCTCTGCCGGGGCTGGCCGATACCGGGTTACCCGGGGTTGCAGTGGGGTCAGTCTTCGATGCAC AAGCTGCTGCGGCGCTGGCAACGGCGTCGGCCGGATGTGCTGTACATCGCCACGGAAGGGCCGCTGGGGCTCTCGGCACT GCGCGCAGCGCGGCGCCTGGGGATTGCGGTGATCAGTGGCTTTCACACCAACTTCCCGCAGTATACGCAGCAGTACGGCA TGGGTTTCATCACCCGCTTGCTTACGCACTACCTGCGCTGGTTCCACAATCGCTCGCGCATGACGCTGGTGCCGAGCATC AGTCAGAAGGTCGAGCTGGAGCGGCGTGGCTTTGAGAGGATCGAGCTGTTGTCACGTGGCGTCGACAGTCAATTGTTCAG CCCGTCCAGACGCTCGCAGCCTTTGCGCGAGAATTGGGGTCTGCAACCCGATGATGTCGCGGTCCTGCATGTCGGCCGCC TTGCCCCCGAAAAAAACCTGAGCCTGCTCAAAGCCTGTTTCGAGGCGCTCAAGGACAGTTACCCGCAGCGTAATCTGAAA TTGGTGGTCGTTGGCGACGGGCCTCAACGCGCACAGCTGGAGCAGCAAATTCCGGAGGCGATTTTCTGCGGGACGCAGCG CGGCGAGGTGCTGGCGACGCACTATGCCTCGGCCGATATGTTTCTGTTCCCCAGCCTCACCGAAACCTTCGGCAACGTGG TTCTCGAAGCACTGGCCTCAGGCCTGGGCGTGGTCGCCTACGATGAAGCCGCAGCCGGGCAGCATATCCGCCATGGCCAC AACGGTGCGTTGGCCATGCCGGGTGACGAGGCGGCGTTCATCGACGCGGCACGCTGGTTGCTGGAGGACAGTGAGACGCT GCGCCGCGTGCGTCTCAACGCCCGGCAGCATGCCAGCCGCCAGGGCTGGACAGCGGTCATCGATCAGTTCGAGCGTCAAT TGCGCGAGGCCTGCCCGAGCCAGAACGCTGCAAGCGTCAAAGAGATCAGGTCGGTAGCCAGCAAGAAAATCAGACCAGTG TCGTCAGTGCGTCTCGACTGA
Upstream 100 bases:
>100_bases GCGCAGTCTCACGCCAACTTGCTCACCTTACCGACGCCCTATCACCAATCCATCACATAACCGCCACATAACCGAAATGT AATCAGTCGACACTGCTCTC
Downstream 100 bases:
>100_bases AGGGCAGGATATCCTGCTCGCGCCCCTCGCGCACTTTCAGTGCCCAATCAGGATCGACCAGCAGCGCGCGCCCCACCGCC ACCAGATCGAACTCGTCGTT
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSQILNVTLITETFTPEINGVANTLGRLCEGLRLRGHRVELVRPRQNDETGAGTAEDLLLCRGWPIPGYPGLQWGQSSMH KLLRRWQRRRPDVLYIATEGPLGLSALRAARRLGIAVISGFHTNFPQYTQQYGMGFITRLLTHYLRWFHNRSRMTLVPSI SQKVELERRGFERIELLSRGVDSQLFSPSRRSQPLRENWGLQPDDVAVLHVGRLAPEKNLSLLKACFEALKDSYPQRNLK LVVVGDGPQRAQLEQQIPEAIFCGTQRGEVLATHYASADMFLFPSLTETFGNVVLEALASGLGVVAYDEAAAGQHIRHGH NGALAMPGDEAAFIDAARWLLEDSETLRRVRLNARQHASRQGWTAVIDQFERQLREACPSQNAASVKEIRSVASKKIRPV SSVRLD
Sequences:
>Translated_406_residues MSQILNVTLITETFTPEINGVANTLGRLCEGLRLRGHRVELVRPRQNDETGAGTAEDLLLCRGWPIPGYPGLQWGQSSMH KLLRRWQRRRPDVLYIATEGPLGLSALRAARRLGIAVISGFHTNFPQYTQQYGMGFITRLLTHYLRWFHNRSRMTLVPSI SQKVELERRGFERIELLSRGVDSQLFSPSRRSQPLRENWGLQPDDVAVLHVGRLAPEKNLSLLKACFEALKDSYPQRNLK LVVVGDGPQRAQLEQQIPEAIFCGTQRGEVLATHYASADMFLFPSLTETFGNVVLEALASGLGVVAYDEAAAGQHIRHGH NGALAMPGDEAAFIDAARWLLEDSETLRRVRLNARQHASRQGWTAVIDQFERQLREACPSQNAASVKEIRSVASKKIRPV SSVRLD >Mature_405_residues SQILNVTLITETFTPEINGVANTLGRLCEGLRLRGHRVELVRPRQNDETGAGTAEDLLLCRGWPIPGYPGLQWGQSSMHK LLRRWQRRRPDVLYIATEGPLGLSALRAARRLGIAVISGFHTNFPQYTQQYGMGFITRLLTHYLRWFHNRSRMTLVPSIS QKVELERRGFERIELLSRGVDSQLFSPSRRSQPLRENWGLQPDDVAVLHVGRLAPEKNLSLLKACFEALKDSYPQRNLKL VVVGDGPQRAQLEQQIPEAIFCGTQRGEVLATHYASADMFLFPSLTETFGNVVLEALASGLGVVAYDEAAAGQHIRHGHN GALAMPGDEAAFIDAARWLLEDSETLRRVRLNARQHASRQGWTAVIDQFERQLREACPSQNAASVKEIRSVASKKIRPVS SVRLD
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45526; Mature: 45394
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQILNVTLITETFTPEINGVANTLGRLCEGLRLRGHRVELVRPRQNDETGAGTAEDLLL CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHE CRGWPIPGYPGLQWGQSSMHKLLRRWQRRRPDVLYIATEGPLGLSALRAARRLGIAVISG ECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC FHTNFPQYTQQYGMGFITRLLTHYLRWFHNRSRMTLVPSISQKVELERRGFERIELLSRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC VDSQLFSPSRRSQPLRENWGLQPDDVAVLHVGRLAPEKNLSLLKACFEALKDSYPQRNLK CCHHHCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEE LVVVGDGPQRAQLEQQIPEAIFCGTQRGEVLATHYASADMFLFPSLTETFGNVVLEALAS EEEECCCCCHHHHHHHCCHHHCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHC GLGVVAYDEAAAGQHIRHGHNGALAMPGDEAAFIDAARWLLEDSETLRRVRLNARQHASR CCCEEEECCHHCCHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGWTAVIDQFERQLREACPSQNAASVKEIRSVASKKIRPVSSVRLD CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCCCC >Mature Secondary Structure SQILNVTLITETFTPEINGVANTLGRLCEGLRLRGHRVELVRPRQNDETGAGTAEDLLL CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHE CRGWPIPGYPGLQWGQSSMHKLLRRWQRRRPDVLYIATEGPLGLSALRAARRLGIAVISG ECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC FHTNFPQYTQQYGMGFITRLLTHYLRWFHNRSRMTLVPSISQKVELERRGFERIELLSRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC VDSQLFSPSRRSQPLRENWGLQPDDVAVLHVGRLAPEKNLSLLKACFEALKDSYPQRNLK CCHHHCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEE LVVVGDGPQRAQLEQQIPEAIFCGTQRGEVLATHYASADMFLFPSLTETFGNVVLEALAS EEEECCCCCHHHHHHHCCHHHCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHC GLGVVAYDEAAAGQHIRHGHNGALAMPGDEAAFIDAARWLLEDSETLRRVRLNARQHASR CCCEEEECCHHCCHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGWTAVIDQFERQLREACPSQNAASVKEIRSVASKKIRPVSSVRLD CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10531370; 9634230; 12218036 [H]