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The map label for this gene is med [H]

Identifier: 66044254

GI number: 66044254

Start: 1134706

End: 1135797

Strand: Direct

Name: med [H]

Synonym: Psyr_1001

Alternate gene names: 66044254

Gene position: 1134706-1135797 (Clockwise)

Preceding gene: 66044253

Following gene: 66044255

Centisome position: 18.62

GC content: 61.45

Gene sequence:

>1092_bases
ATGTACAAGAAACTGTTGCCCGGGACATTGTGTGCGGCCGTAGCGTTGGGAGCGGTCAGCCTTGCTCAGGCTGAAGGGTT
GACCCTCGAAGGGAAGCCGAAAATCGCCATGGTGTATATCAGCCCGCGCAATGATGGCGGCTGGACTCAGGCCTTCGACG
AAGCGCGCGTGAAGCTGGAAAAGGATCTGGACACAAAAATCCAGTACGTCGAGAGTGTGCCCGAGAACGCGGCAGCCATT
ACGCCGGTGGTCGACCGACTCATCGCACGCGGTGCCAACATCATCGTCGGCACTGCATTCGGTTACTCCGACACCTTTCT
TGCACTGGCCAGGAAATACCCGAAAGTCGCGTTCCTGAATGGCTCGGGCACCACCAATGCACCCAACCTCGAATCGTTTT
ACGGGCGTACCTACGAGAGCCAGTACCTGTGCGGTATGGCCGCAGGCGCGGCCTCGAAGACCGGCAAGCTGGGGTTTGTC
GCCGCCAACCCGTTCGGCCAGGTCAACTGGACTATCAACGCCTATGAACTGGGCGCCCGGCAGATCAATCCGAAGGCCAC
CGTCACCGTGGTCTATACCGGTGCCTGGAACGACCCGGTCAAGGAACGCGCAGCAACCATGGCGCTGATCGACAATGGTG
CCGACGTGGTCGGTCAGCACGTCGACAGCCCGACACCGCAGATCGTCGCTCAGGAGCGCGGCATTCATGGCACCGGCCAC
CATCGCGACCTGAGCGAGTTCGCCCCCAAGGCGACGGTCTGTTCTTCGCTGTGGGTCTGGGATCGCTTCCTCGGGCCTGA
GCTGAAGAACATCATTGCCGGCAACTGGACGCCGCCCGCCAACGGCGCGCTGCTGTCGATGCAGCAGGGCGGTACCGATA
TCAAGCTGACTGCGGACACGATCATTTCCGATGAGGACCGCAAGAAGATCGAGGCCGAGCGCGCCGAGCTGCTGGCCGGC
CGGAAAATCATCTACAGCGGCCCGCTGGCCGATCGTGACGGCAAGGAGCGGGTGGCGGCCGGTCAGCAGTTGTCTGACCC
GGATCTGTGGAAAATGGACTGGTTCGTCGAAGGCGTGAAGACTCAGCAATGA

Upstream 100 bases:

>100_bases
GTCAGGTCGTTGTTCCATAGCGCTTTTCCTGTACTGGCATGGATGCTGCTAATGCCTGCCTGTGCGGTCCTCATCGGCCA
TTACCCTCAGGAAAACGTCT

Downstream 100 bases:

>100_bases
GTCAGGTCAATGCGCTGCAACTCACCGGCATCAGCAAATCGTTCGATGGCTTCAAGGCGCTGATCGACGCCGACTTCACC
GCCTGTTGGGGGGAAGTGCA

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MYKKLLPGTLCAAVALGAVSLAQAEGLTLEGKPKIAMVYISPRNDGGWTQAFDEARVKLEKDLDTKIQYVESVPENAAAI
TPVVDRLIARGANIIVGTAFGYSDTFLALARKYPKVAFLNGSGTTNAPNLESFYGRTYESQYLCGMAAGAASKTGKLGFV
AANPFGQVNWTINAYELGARQINPKATVTVVYTGAWNDPVKERAATMALIDNGADVVGQHVDSPTPQIVAQERGIHGTGH
HRDLSEFAPKATVCSSLWVWDRFLGPELKNIIAGNWTPPANGALLSMQQGGTDIKLTADTIISDEDRKKIEAERAELLAG
RKIIYSGPLADRDGKERVAAGQQLSDPDLWKMDWFVEGVKTQQ

Sequences:

>Translated_363_residues
MYKKLLPGTLCAAVALGAVSLAQAEGLTLEGKPKIAMVYISPRNDGGWTQAFDEARVKLEKDLDTKIQYVESVPENAAAI
TPVVDRLIARGANIIVGTAFGYSDTFLALARKYPKVAFLNGSGTTNAPNLESFYGRTYESQYLCGMAAGAASKTGKLGFV
AANPFGQVNWTINAYELGARQINPKATVTVVYTGAWNDPVKERAATMALIDNGADVVGQHVDSPTPQIVAQERGIHGTGH
HRDLSEFAPKATVCSSLWVWDRFLGPELKNIIAGNWTPPANGALLSMQQGGTDIKLTADTIISDEDRKKIEAERAELLAG
RKIIYSGPLADRDGKERVAAGQQLSDPDLWKMDWFVEGVKTQQ
>Mature_363_residues
MYKKLLPGTLCAAVALGAVSLAQAEGLTLEGKPKIAMVYISPRNDGGWTQAFDEARVKLEKDLDTKIQYVESVPENAAAI
TPVVDRLIARGANIIVGTAFGYSDTFLALARKYPKVAFLNGSGTTNAPNLESFYGRTYESQYLCGMAAGAASKTGKLGFV
AANPFGQVNWTINAYELGARQINPKATVTVVYTGAWNDPVKERAATMALIDNGADVVGQHVDSPTPQIVAQERGIHGTGH
HRDLSEFAPKATVCSSLWVWDRFLGPELKNIIAGNWTPPANGALLSMQQGGTDIKLTADTIISDEDRKKIEAERAELLAG
RKIIYSGPLADRDGKERVAAGQQLSDPDLWKMDWFVEGVKTQQ

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 39156; Mature: 39156

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKLLPGTLCAAVALGAVSLAQAEGLTLEGKPKIAMVYISPRNDGGWTQAFDEARVKLE
CCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
KDLDTKIQYVESVPENAAAITPVVDRLIARGANIIVGTAFGYSDTFLALARKYPKVAFLN
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEC
GSGTTNAPNLESFYGRTYESQYLCGMAAGAASKTGKLGFVAANPFGQVNWTINAYELGAR
CCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCE
QINPKATVTVVYTGAWNDPVKERAATMALIDNGADVVGQHVDSPTPQIVAQERGIHGTGH
EECCCEEEEEEEECCCCCHHHHHHHEEEEECCCHHHHHHCCCCCCHHHHHHCCCCCCCCC
HRDLSEFAPKATVCSSLWVWDRFLGPELKNIIAGNWTPPANGALLSMQQGGTDIKLTADT
CCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEHH
IISDEDRKKIEAERAELLAGRKIIYSGPLADRDGKERVAAGQQLSDPDLWKMDWFVEGVK
EECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCCCCCCEEHHHHCCCCC
TQQ
CCC
>Mature Secondary Structure
MYKKLLPGTLCAAVALGAVSLAQAEGLTLEGKPKIAMVYISPRNDGGWTQAFDEARVKLE
CCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
KDLDTKIQYVESVPENAAAITPVVDRLIARGANIIVGTAFGYSDTFLALARKYPKVAFLN
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEC
GSGTTNAPNLESFYGRTYESQYLCGMAAGAASKTGKLGFVAANPFGQVNWTINAYELGAR
CCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCE
QINPKATVTVVYTGAWNDPVKERAATMALIDNGADVVGQHVDSPTPQIVAQERGIHGTGH
EECCCEEEEEEEECCCCCHHHHHHHEEEEECCCHHHHHHCCCCCCHHHHHHCCCCCCCCC
HRDLSEFAPKATVCSSLWVWDRFLGPELKNIIAGNWTPPANGALLSMQQGGTDIKLTADT
CCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEHH
IISDEDRKKIEAERAELLAGRKIIYSGPLADRDGKERVAAGQQLSDPDLWKMDWFVEGVK
EECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCCCCCCEEHHHHCCCCC
TQQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]