| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is malT [H]
Identifier: 66044246
GI number: 66044246
Start: 1125648
End: 1128410
Strand: Direct
Name: malT [H]
Synonym: Psyr_0993
Alternate gene names: 66044246
Gene position: 1125648-1128410 (Clockwise)
Preceding gene: 66044245
Following gene: 66044253
Centisome position: 18.47
GC content: 63.92
Gene sequence:
>2763_bases ATGCCGAAACAACGATTCCTACACGAGCCGGCCATGACTGATCTGTCCCGAATGCAAGGGTTTGCAGACGGCGCGATTCC TGCGTTGGAAGGGCGGTTTTTCCGTCCACCTCTGCCTGAGGGTTATGTTCCCCGTGCGCGCCTGTGTCAGCGTCTCGATG CCGGGCTTGGCGGCCGACTGCTGCTGGTCTGCGCCCCGGCCGGGTTCGGCAAGAGTTCGCTGGCTGTCGAGTTCTGTCAG GGGTTGCCGGACAACTGGCAAAACGTATGGCTGGGTCTGAGCGCGCGGGACAGCGACCCGGGTCGTTTTCTCGAGCGTTT GCTGGCCAGCCTTCAACAGTTCTTCCCGCAACTGGGTACTCAGGCGATGGCTTTGCTGAAGATGCGCCAGCGCCACCAGC CGTTTGCCTTCGAGGAGTGGCTCGACGGCCTGCTCGACGAGTTGGCCATGCACCTGATGCTGAGCAAGCCGCTGTTGCTA GTGCTCGATGACTATCATCTGGCCCAGGGGCCGGTACTCGATCGCTGCCTGCAGTTCCTTCTCAACCATCTACCGGCCGG GCTGGTGGTCATGGTGACCAGCCGGCAGCGCCCGGACTGGCATCTGGCACGCTTGCGTCTGACGCGGCAGTTGCTGGAAA TCAACGAACAGGACCTGCGCCTCACGCACGCCGAATCCATGGCAGTGCTGGAGCGGCACAGCGGATCGCTCGACAGCGAG GCGTTGCAAAGCCTGATTCAGCGCAGCGAAGGCTGGGTCGCCGGGCTGCGCTTCTGGTTGCTGGCGGCGTCCGAAGCCGG TGATGAAAGCGCCTTGCCCCAGACGCTGCGCGGCAGTGAGGTGCTGATTCGCGAGTACCTGCTGGAAGAAGTGATCGACT GCCTGCCGGCCGATGTTCAGGCGTTTCTCTACGACACCGCCTGCCTGGAGCGTTTTTGCGCCGAGCTGTGCGACGCCGCG CGGGATGGTCACGACAGCGCCGGGATGCTGGGTTATCTGCAGGCGCATCAGGTCTTTCTGGTACCGCTGGACGAGCAGGG CCACTGGTTTCGCTACCACCATCTGTTTTCCGATCTGTTGCGCGCTCGGCAGGCGGCCGGTGCACCACCGACCCGCCTGC ACCTGAATGCCTGCCGCTGGTTCAGCGCTCAGGGCCAACTCGACGAAGCGGTCGAGCAGGCGTTGCGCGCCGGGCATCTG GATGTGGCCGCCAATCTGGTGCAGAACCTCTCCGAAGAACAGCTGCTGGCCGAACAGAATGTCGGCATGTTGCTGCGCTG GAAGATGGACTTGCCGGACGACCTGCTGACCAGCACGCCACGCCTGATCGTGCTCTACGCCTGGGCGCTGGGGCTGGCCT GCCAGCTGGATGCCGCCGAAGAGCTGGCCAATCAACTGAGCCGCTTTCTGCCGGCGCCCTCGGCAACCGCTCAGAAATCC ATGCTCGCCCAATGGCTGGCGCTCAGCGGCATCATCGCCCGTGGCCGCGGAGACAGTGAAAAGACTCAACATTATTGCAC CGAAGCCCTGCTGAGCCTGCCGGAAAAACGCTATGGGCAGCGGCTGGTGTGCTTGTCGACACTGGCCAACCTCGCGGTCG CCAACGGTGATCTGTGGCGCGCCCGCGTGTTGAATCGCGATGCGCTAGAGCTGGCGCAACGGGTCGCCAATCCGTTGTTC GAGGCGCTGGCGCATTATGACCGCGCCAGAGTTCTGCAGGCGCGTGGCGAAATTCTCCGCGCGCTGGAGGAAGTGCGGCA GGGGCAGCAACGCCTCAAAGACTTGTCCACCGTTCGGCTCTACGCGGTCCGCGCGCGCCTGACGCTGTATGAAGGCTACT TGCTGACCCTGCGTCTGCAGGTGGACGAAGGGCGGGTGTTATTGCTGGCCGGTCTGGCCGAGGCACGCGCCTGCCGCGAC ATCAGCGTGCTGATCGGTCACTGTGTAATCGCCACCATGGAAGGCTGCACCGGCCGCTTTGCCGAAGCCTTCGCCGAACT CGCCGAGGCCGAACGGCTGATGCACATCTGGGACGTGCCGCCGATTTACTACCTGGCGATGATTACCCTGGTCAAATGCG AGCTGTGGCTGTTGCAGGGGCGCATGGACCTTGCCGAAGCGTGGCTGCTGCGCCTGACGCAGACCTACAACGGCGGTCTC GGTGCTGCGGCCCCCGAGTGCCATCCGCAACTGCCGCAACACATTGAGTTGCAGCGTGCCGTACTCGAACGACAGCAGGG TGACGGCGTTGCCTGCGAGCAGCGCTTGCAGGCGCTCGAGCGGCGCGCTCAGGAGGTGGGGGCGAAACTGCTTGGACTGA TCGCCATGACCCAGCAGATCGGCTTGCTGCTGAGTCAGGCGCGACGCGACGAGGCGCGGGCATTGTTGCTGCGCAGCCTG CCCGCAGCGTCCGGCGGTGCATTGATGCCGTTCAACGCGCTGCTGGGCGAGCACCCCGAGTGGCTGCATGAGCAACTTGT GCAACTGCCACCCTGCCGGGTTCAAGCTGCATTGCTGGAAAAGCTTCCGGCCTGTTGCACGCCGTCGCCCGAGGCGGCAC ATGGCGGCGATTGCCTCAGCGTGCGCGAACTGGGTGTGCTGCAACTGATTGCACAGGGCTGTTCCAATCAGGAAATCAGC GAGCAGCTGTTCATCTCCCTGCACACCGTCAAGACTCACGCCAGTCACATCAACAGCAAACTGGGGGTCGAGCGTCGCAC TCAAGCGGTGGCGCGGGCCAAGACACTGGGCTTGCTGGGTTGA
Upstream 100 bases:
>100_bases TGTGGGAAGTGGCCTTATAAGCTGTAGGAATTTTGTTACAGTCTTTTCGGTGATGGCCTTTCAAAAGTAGCGATTTACCC GCTAGTCTCCGAACACCGCG
Downstream 100 bases:
>100_bases CGTCAACGGCGTTCACCGGGCCACTCAGGCCGGGCTGCCCGCCCACAGCGTATCAACTTCTTCCAGCCCCCAATCGGTGG TTTTTTCGATTCTGGCGATC
Product: regulatory protein, LuxR
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 920; Mature: 919
Protein sequence:
>920_residues MPKQRFLHEPAMTDLSRMQGFADGAIPALEGRFFRPPLPEGYVPRARLCQRLDAGLGGRLLLVCAPAGFGKSSLAVEFCQ GLPDNWQNVWLGLSARDSDPGRFLERLLASLQQFFPQLGTQAMALLKMRQRHQPFAFEEWLDGLLDELAMHLMLSKPLLL VLDDYHLAQGPVLDRCLQFLLNHLPAGLVVMVTSRQRPDWHLARLRLTRQLLEINEQDLRLTHAESMAVLERHSGSLDSE ALQSLIQRSEGWVAGLRFWLLAASEAGDESALPQTLRGSEVLIREYLLEEVIDCLPADVQAFLYDTACLERFCAELCDAA RDGHDSAGMLGYLQAHQVFLVPLDEQGHWFRYHHLFSDLLRARQAAGAPPTRLHLNACRWFSAQGQLDEAVEQALRAGHL DVAANLVQNLSEEQLLAEQNVGMLLRWKMDLPDDLLTSTPRLIVLYAWALGLACQLDAAEELANQLSRFLPAPSATAQKS MLAQWLALSGIIARGRGDSEKTQHYCTEALLSLPEKRYGQRLVCLSTLANLAVANGDLWRARVLNRDALELAQRVANPLF EALAHYDRARVLQARGEILRALEEVRQGQQRLKDLSTVRLYAVRARLTLYEGYLLTLRLQVDEGRVLLLAGLAEARACRD ISVLIGHCVIATMEGCTGRFAEAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLLQGRMDLAEAWLLRLTQTYNGGL GAAAPECHPQLPQHIELQRAVLERQQGDGVACEQRLQALERRAQEVGAKLLGLIAMTQQIGLLLSQARRDEARALLLRSL PAASGGALMPFNALLGEHPEWLHEQLVQLPPCRVQAALLEKLPACCTPSPEAAHGGDCLSVRELGVLQLIAQGCSNQEIS EQLFISLHTVKTHASHINSKLGVERRTQAVARAKTLGLLG
Sequences:
>Translated_920_residues MPKQRFLHEPAMTDLSRMQGFADGAIPALEGRFFRPPLPEGYVPRARLCQRLDAGLGGRLLLVCAPAGFGKSSLAVEFCQ GLPDNWQNVWLGLSARDSDPGRFLERLLASLQQFFPQLGTQAMALLKMRQRHQPFAFEEWLDGLLDELAMHLMLSKPLLL VLDDYHLAQGPVLDRCLQFLLNHLPAGLVVMVTSRQRPDWHLARLRLTRQLLEINEQDLRLTHAESMAVLERHSGSLDSE ALQSLIQRSEGWVAGLRFWLLAASEAGDESALPQTLRGSEVLIREYLLEEVIDCLPADVQAFLYDTACLERFCAELCDAA RDGHDSAGMLGYLQAHQVFLVPLDEQGHWFRYHHLFSDLLRARQAAGAPPTRLHLNACRWFSAQGQLDEAVEQALRAGHL DVAANLVQNLSEEQLLAEQNVGMLLRWKMDLPDDLLTSTPRLIVLYAWALGLACQLDAAEELANQLSRFLPAPSATAQKS MLAQWLALSGIIARGRGDSEKTQHYCTEALLSLPEKRYGQRLVCLSTLANLAVANGDLWRARVLNRDALELAQRVANPLF EALAHYDRARVLQARGEILRALEEVRQGQQRLKDLSTVRLYAVRARLTLYEGYLLTLRLQVDEGRVLLLAGLAEARACRD ISVLIGHCVIATMEGCTGRFAEAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLLQGRMDLAEAWLLRLTQTYNGGL GAAAPECHPQLPQHIELQRAVLERQQGDGVACEQRLQALERRAQEVGAKLLGLIAMTQQIGLLLSQARRDEARALLLRSL PAASGGALMPFNALLGEHPEWLHEQLVQLPPCRVQAALLEKLPACCTPSPEAAHGGDCLSVRELGVLQLIAQGCSNQEIS EQLFISLHTVKTHASHINSKLGVERRTQAVARAKTLGLLG >Mature_919_residues PKQRFLHEPAMTDLSRMQGFADGAIPALEGRFFRPPLPEGYVPRARLCQRLDAGLGGRLLLVCAPAGFGKSSLAVEFCQG LPDNWQNVWLGLSARDSDPGRFLERLLASLQQFFPQLGTQAMALLKMRQRHQPFAFEEWLDGLLDELAMHLMLSKPLLLV LDDYHLAQGPVLDRCLQFLLNHLPAGLVVMVTSRQRPDWHLARLRLTRQLLEINEQDLRLTHAESMAVLERHSGSLDSEA LQSLIQRSEGWVAGLRFWLLAASEAGDESALPQTLRGSEVLIREYLLEEVIDCLPADVQAFLYDTACLERFCAELCDAAR DGHDSAGMLGYLQAHQVFLVPLDEQGHWFRYHHLFSDLLRARQAAGAPPTRLHLNACRWFSAQGQLDEAVEQALRAGHLD VAANLVQNLSEEQLLAEQNVGMLLRWKMDLPDDLLTSTPRLIVLYAWALGLACQLDAAEELANQLSRFLPAPSATAQKSM LAQWLALSGIIARGRGDSEKTQHYCTEALLSLPEKRYGQRLVCLSTLANLAVANGDLWRARVLNRDALELAQRVANPLFE ALAHYDRARVLQARGEILRALEEVRQGQQRLKDLSTVRLYAVRARLTLYEGYLLTLRLQVDEGRVLLLAGLAEARACRDI SVLIGHCVIATMEGCTGRFAEAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLLQGRMDLAEAWLLRLTQTYNGGLG AAAPECHPQLPQHIELQRAVLERQQGDGVACEQRLQALERRAQEVGAKLLGLIAMTQQIGLLLSQARRDEARALLLRSLP AASGGALMPFNALLGEHPEWLHEQLVQLPPCRVQAALLEKLPACCTPSPEAAHGGDCLSVRELGVLQLIAQGCSNQEISE QLFISLHTVKTHASHINSKLGVERRTQAVARAKTLGLLG
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=533, Percent_Identity=27.7673545966229, Blast_Score=159, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 102346; Mature: 102215
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQRFLHEPAMTDLSRMQGFADGAIPALEGRFFRPPLPEGYVPRARLCQRLDAGLGGRL CCCHHHCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCE LLVCAPAGFGKSSLAVEFCQGLPDNWQNVWLGLSARDSDPGRFLERLLASLQQFFPQLGT EEEEECCCCCCHHHHHHHHHCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH QAMALLKMRQRHQPFAFEEWLDGLLDELAMHLMLSKPLLLVLDDYHLAQGPVLDRCLQFL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCHHHHHHHHHH LNHLPAGLVVMVTSRQRPDWHLARLRLTRQLLEINEQDLRLTHAESMAVLERHSGSLDSE HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHH ALQSLIQRSEGWVAGLRFWLLAASEAGDESALPQTLRGSEVLIREYLLEEVIDCLPADVQ HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHH AFLYDTACLERFCAELCDAARDGHDSAGMLGYLQAHQVFLVPLDEQGHWFRYHHLFSDLL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECEEEEEEECCCCCHHHHHHHHHHHH RARQAAGAPPTRLHLNACRWFSAQGQLDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQN HHHHHCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCC VGMLLRWKMDLPDDLLTSTPRLIVLYAWALGLACQLDAAEELANQLSRFLPAPSATAQKS CCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHH MLAQWLALSGIIARGRGDSEKTQHYCTEALLSLPEKRYGQRLVCLSTLANLAVANGDLWR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCHHH ARVLNRDALELAQRVANPLFEALAHYDRARVLQARGEILRALEEVRQGQQRLKDLSTVRL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAVRARLTLYEGYLLTLRLQVDEGRVLLLAGLAEARACRDISVLIGHCVIATMEGCTGRF HHHHHHHHHCCCEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AEAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLLQGRMDLAEAWLLRLTQTYNGGL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC GAAAPECHPQLPQHIELQRAVLERQQGDGVACEQRLQALERRAQEVGAKLLGLIAMTQQI CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLLSQARRDEARALLLRSLPAASGGALMPFNALLGEHPEWLHEQLVQLPPCRVQAALLE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH KLPACCTPSPEAAHGGDCLSVRELGVLQLIAQGCSNQEISEQLFISLHTVKTHASHINSK HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVERRTQAVARAKTLGLLG HCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PKQRFLHEPAMTDLSRMQGFADGAIPALEGRFFRPPLPEGYVPRARLCQRLDAGLGGRL CCHHHCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCE LLVCAPAGFGKSSLAVEFCQGLPDNWQNVWLGLSARDSDPGRFLERLLASLQQFFPQLGT EEEEECCCCCCHHHHHHHHHCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH QAMALLKMRQRHQPFAFEEWLDGLLDELAMHLMLSKPLLLVLDDYHLAQGPVLDRCLQFL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCHHHHHHHHHH LNHLPAGLVVMVTSRQRPDWHLARLRLTRQLLEINEQDLRLTHAESMAVLERHSGSLDSE HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHH ALQSLIQRSEGWVAGLRFWLLAASEAGDESALPQTLRGSEVLIREYLLEEVIDCLPADVQ HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHH AFLYDTACLERFCAELCDAARDGHDSAGMLGYLQAHQVFLVPLDEQGHWFRYHHLFSDLL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECEEEEEEECCCCCHHHHHHHHHHHH RARQAAGAPPTRLHLNACRWFSAQGQLDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQN HHHHHCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCC VGMLLRWKMDLPDDLLTSTPRLIVLYAWALGLACQLDAAEELANQLSRFLPAPSATAQKS CCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHH MLAQWLALSGIIARGRGDSEKTQHYCTEALLSLPEKRYGQRLVCLSTLANLAVANGDLWR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCHHH ARVLNRDALELAQRVANPLFEALAHYDRARVLQARGEILRALEEVRQGQQRLKDLSTVRL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAVRARLTLYEGYLLTLRLQVDEGRVLLLAGLAEARACRDISVLIGHCVIATMEGCTGRF HHHHHHHHHCCCEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AEAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLLQGRMDLAEAWLLRLTQTYNGGL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC GAAAPECHPQLPQHIELQRAVLERQQGDGVACEQRLQALERRAQEVGAKLLGLIAMTQQI CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLLSQARRDEARALLLRSLPAASGGALMPFNALLGEHPEWLHEQLVQLPPCRVQAALLE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH KLPACCTPSPEAAHGGDCLSVRELGVLQLIAQGCSNQEISEQLFISLHTVKTHASHINSK HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVERRTQAVARAKTLGLLG HCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA