| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yitJ [H]
Identifier: 66044228
GI number: 66044228
Start: 1107343
End: 1108275
Strand: Direct
Name: yitJ [H]
Synonym: Psyr_0975
Alternate gene names: 66044228
Gene position: 1107343-1108275 (Clockwise)
Preceding gene: 66044225
Following gene: 66044231
Centisome position: 18.17
GC content: 62.06
Gene sequence:
>933_bases ATGAGTTTTTTTCATATACATATAAGCAGATCACATATGACGCAAGGTACAACTGTAATTCTCGATGGCGGCATGGGCCG TGAACTGCAGCGTCGCGGAGCCCCGTTCCGCCAGCCTGAATGGTCGGCTCTGGCATTGAGTGAAGCACCGGAAGCGGTGA GTGCGGTACACGCCGCTTATATCGAAAGTGGTGCTCAGGTCATCACCAGTAACAGCTACGCCGTCGTGCCGTTTCATATT GGCGAAGAGCGTTTTGCCCGTGAAGGTCAGGCATTGGCAGCGCTGGCCGGGCAACTGGCGCGCGAGTCGGCCGATGCTTC TGGCGGACGCGCCCGGGTAGCGGGCTCCATTCCGCCGCTGTTCGGTTCCTATCGCCCTGATCTGTACAAGCCGGAGCAGG CTACTGATGTTCTGAAACCACTGGTTGCCGGGCTGTCGCCGTATGTCGACCTGTGGCTGGCCGAAACCCAGAGCTGCATT CTCGAAGCGCAGACCATCCGCGCCGGGCTGCCCAATGACGGCAAACCGTTCTGGCTGTCGTTCACCCTGCAGGATGAGGA CACTGACGAGGTCCCGCGGCTGCGCTCAGGTGAGCCGGTCGCCGACGCCGCCAGGGCCGCCGCCGCAATGGGTGTCGCCA CGCTGCTGTTCAACTGCAGTCAGCCAGAGGTGATCGGTGGCGCAATCGATGCAGCGCGTGAGGTGTTCACGTCGCTGAAC GTCGACATTGCCATCGGCGCCTATGCCAACGCCTTCCCGCCGCAACCCAAGGACGCCACCGCCAACGACGGTCTGGATGA GCTGCGTGAAGACCTTGACCCGCAGGGCTATCAGCAGTGGGCGGCAGACTGGGTCAAGCGCGGCGCCACGCACATTGGCG GCTGCTGCGGGATTGGCCCCGAGCACATTGCCGTACTGTCCAGAAGCCTCTGA
Upstream 100 bases:
>100_bases ATGCCCAGCAGAGCGCGATAATTCACAGATATCCCCTGAAAAAGTGTTTGTAGTTTGATGAAAGGGCCGTATTAAATACG TTATACAAGACTGACTCATA
Downstream 100 bases:
>100_bases CCGTCACCTGCAATAAACGCAATAAAAAGCCCCGTGGCTGGTAAAGGCTCACGGGGCTTTTTGTTACAGCACAGCAGCGA CCGGATCAGGCGAAGCTGTG
Product: homocysteine S-methyltransferase
Products: NA
Alternate protein names: Homocysteine S-methyltransferase; S-methylmethionine:homocysteine methyltransferase; 5,10-methylenetetrahydrofolate reductase [H]
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSFFHIHISRSHMTQGTTVILDGGMGRELQRRGAPFRQPEWSALALSEAPEAVSAVHAAYIESGAQVITSNSYAVVPFHI GEERFAREGQALAALAGQLARESADASGGRARVAGSIPPLFGSYRPDLYKPEQATDVLKPLVAGLSPYVDLWLAETQSCI LEAQTIRAGLPNDGKPFWLSFTLQDEDTDEVPRLRSGEPVADAARAAAAMGVATLLFNCSQPEVIGGAIDAAREVFTSLN VDIAIGAYANAFPPQPKDATANDGLDELREDLDPQGYQQWAADWVKRGATHIGGCCGIGPEHIAVLSRSL
Sequences:
>Translated_310_residues MSFFHIHISRSHMTQGTTVILDGGMGRELQRRGAPFRQPEWSALALSEAPEAVSAVHAAYIESGAQVITSNSYAVVPFHI GEERFAREGQALAALAGQLARESADASGGRARVAGSIPPLFGSYRPDLYKPEQATDVLKPLVAGLSPYVDLWLAETQSCI LEAQTIRAGLPNDGKPFWLSFTLQDEDTDEVPRLRSGEPVADAARAAAAMGVATLLFNCSQPEVIGGAIDAAREVFTSLN VDIAIGAYANAFPPQPKDATANDGLDELREDLDPQGYQQWAADWVKRGATHIGGCCGIGPEHIAVLSRSL >Mature_309_residues SFFHIHISRSHMTQGTTVILDGGMGRELQRRGAPFRQPEWSALALSEAPEAVSAVHAAYIESGAQVITSNSYAVVPFHIG EERFAREGQALAALAGQLARESADASGGRARVAGSIPPLFGSYRPDLYKPEQATDVLKPLVAGLSPYVDLWLAETQSCIL EAQTIRAGLPNDGKPFWLSFTLQDEDTDEVPRLRSGEPVADAARAAAAMGVATLLFNCSQPEVIGGAIDAAREVFTSLNV DIAIGAYANAFPPQPKDATANDGLDELREDLDPQGYQQWAADWVKRGATHIGGCCGIGPEHIAVLSRSL
Specific function: Catalyzes Methyl Transfer From S-Methylmethionine Or S- Adenosylmethionine (Less Efficient) To Homocysteine, Selenohomocysteine And Less Efficiently Selenocysteine. [C]
COG id: COG2040
COG function: function code E; Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Homo sapiens, GI157266337, Length=318, Percent_Identity=25.7861635220126, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786456, Length=317, Percent_Identity=26.813880126183, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003171 - InterPro: IPR003726 [H]
Pfam domain/function: PF02219 MTHFR; PF02574 S-methyl_trans [H]
EC number: =2.1.1.10; =1.5.1.20 [H]
Molecular weight: Translated: 33079; Mature: 32948
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFHIHISRSHMTQGTTVILDGGMGRELQRRGAPFRQPEWSALALSEAPEAVSAVHAAY CCEEEEEEECCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCEEEHHCCHHHHHHHHHHH IESGAQVITSNSYAVVPFHIGEERFAREGQALAALAGQLARESADASGGRARVAGSIPPL HHCCCEEEECCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC FGSYRPDLYKPEQATDVLKPLVAGLSPYVDLWLAETQSCILEAQTIRAGLPNDGKPFWLS CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE FTLQDEDTDEVPRLRSGEPVADAARAAAAMGVATLLFNCSQPEVIGGAIDAAREVFTSLN EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC VDIAIGAYANAFPPQPKDATANDGLDELREDLDPQGYQQWAADWVKRGATHIGGCCGIGP CEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCCH EHIAVLSRSL HHHHHHHHCC >Mature Secondary Structure SFFHIHISRSHMTQGTTVILDGGMGRELQRRGAPFRQPEWSALALSEAPEAVSAVHAAY CEEEEEEECCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCEEEHHCCHHHHHHHHHHH IESGAQVITSNSYAVVPFHIGEERFAREGQALAALAGQLARESADASGGRARVAGSIPPL HHCCCEEEECCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC FGSYRPDLYKPEQATDVLKPLVAGLSPYVDLWLAETQSCILEAQTIRAGLPNDGKPFWLS CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE FTLQDEDTDEVPRLRSGEPVADAARAAAAMGVATLLFNCSQPEVIGGAIDAAREVFTSLN EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC VDIAIGAYANAFPPQPKDATANDGLDELREDLDPQGYQQWAADWVKRGATHIGGCCGIGP CEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCCH EHIAVLSRSL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]