| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044185
Identifier: 66044185
GI number: 66044185
Start: 1061156
End: 1063639
Strand: Reverse
Name: 66044185
Synonym: Psyr_0930
Alternate gene names: NA
Gene position: 1063639-1061156 (Counterclockwise)
Preceding gene: 66044186
Following gene: 66044184
Centisome position: 17.45
GC content: 60.14
Gene sequence:
>2484_bases ATGTCCAGACACCTCGACCGTGGGCGAGAAACGCTCATGGATATGTTTCATCGCCACCGCCAGGCCGATGAGCACGACCT TGCCACCGTGGCACTCGAGTGTGCGCTGCAGATCCCTGAATACCGTCCGGAAGCACTGGTCTGGAAAGGTATCGAGGCCC TGCCGCAAGCCCCAAAGCTTGCTTTTATTTATTTGCTCAACGCGGCGAATGCTTTTCCTCTGCGTGCGGACATTCACGCC CTGCTCGGGCGCAGCATCATTGCCCAGGGTCAGCCGTTACTTGCCAACCGTTACATGAGTAATGCCTGGCAAAAACTGCC TGCCGACGCATCGCTACGCATGATGCTGTGGCAGGCACGCAGCCTGTCGGAAACACCTGAAGACTTGCGCCGCGTCATTC TCGCGCACCTTCCTGATATTACCGCTGCCAACGAACTCGCTCTGGTACTCAAACTGCTGGCTGCGCAGACTGGATTGCCA GGCACGCTGGGCGTGGTCCGTTACCTGCCTGATGTGCAGGAGATCCACGGCTGGGCCATCGACGTGCACAATGTGCAGAC GCCTGTGTCGTTGCAACTGGAAGCCAACGGTCACTTGATCAGCATGGTTGCCAGCGCCCCGCACCCGTTACTGACAGCGG CAGGATTGCCTGCGACTCACGGCGGTATTCGCATCAAGGTGCCCAACGCAACTCCTGCCATACATGTGCGCTTCGATAAC GGCGCTGCACTGCTGGGCAGCCCGCTGTCAGCAATGCCGACTTTCATTGCTCCGCCTGCGGCGTTGAAGGTTGGCGACAA GCAGCCGGTGGATGTACTCATTCCTGTTTACGACGGTCTGGAAGAAACCCTCGAGTGCATCAACAGTGCACTGGAAGCGC GTAAACGCAATCGCACACCTCATCGCCTGGTGGTGATCGAAGACGCAACGCCAGTCCCCGCGCTGCGCAAAGCCCTCAAG GTTCTCGCGGGCAAAGGCAAAATTACTCTGGTGCAGAACCCCATCAACCTGGGCTTCATCCGCAGCATGAACCGCGCGAT GGCGTTAAGCCCCAGGCAGGATGTGGTCTGGTTGAATGCCGACACCCGTGTGCAGGGTGACTGGCTGGACCGGCTGCGCA CGACTGCCTATGCCGACGAGACCATTGCCTCGGTCACCCCGTTCACCAATAACGGCGAGTTGATGAGCTTTCCTGAAAGC CGCTTCAGCCATCCGATGCCCAGCGCAGCAGAACAGGCCCGCCTGGACGATCTGGCGCGAATGACTGGCAGTCCGGCCAT GGAGCTCGAAACCGGCTGCGGCTTTTGCCTGTACATCAAACGCAGCGCTCTGGACAGTGTGGGTTATCTGGATGAAGTCG AACTGCTGCGTGGCTATGGTGAGGAAACTGACTGGTGCCTGAGGGCACGCGGCCTGGGTTGGCGTCATGTGGGCGCGCCC AATGTGTTCGTTGCGCATCAGGGCGGGATTTCGTTCGGCGCTGAAAAGGCGCTGCGGGTGGCGCACAATAACGCCATCCT CAAGCGTCGCTACCCGGACGCGTCATCGCGCTATGAAAACTTCTGCCTGCGCGATCCCATCAGGCCTGCGCGTCAGGCTC TGCAACGCGCGCGCCTTGTGCAACTGGCCGAGCAGTTGTCGACACCGGCATTACGGCAGTTGCATATCGCCAACAGCGCA GCATCGCAAGCGCCTTTAAGCCTCACGTGGCGCAATAAGGGCCAGCATGCCCAGGCAACGCTGCAGGCCAACTTGCTGCC GCTGGCGTTCAGCCTTGATTACGAACTGCCTGCCGACACCGAGCAACTGCTGCAAGACCTACGCAGCCTGCCACTGGACG AACTGATCTATCAGAACCTCGCCAATTGCCCTGCAGCGCTCTGCGCATTGGCCGAGCAACTGGATAAACCTTACCGAATC ATTTGCCGCGATGACGCGTTGCTCACGCCAGACAGCCGCTTCGACTGGGTGGATTTCGCACGCAAGGCGCAGAGCATCGA GTTGCCGTGGCATGCCCTGCGCGAGCGTTACGCCGCCGCTCTGCCACAGGCCGATATTCTGATCCGGCCAGCCCCTCAAG CGCTGCCGAACAACGACTCTGTACCAACCACCCTGTTGATTGCCGACCGCCTTTCAGACCCTGACATTGCCAAACATTGG CTGGAAGTGGGCAGGCGCATCACACACGAAAATCAATCTCTGGTACTGCTCGTTGCAGAGGACGGCCCATGGGTCGCCCC CCTGCTCGCCACTGGCGCAATTCATGCATTACCCATTGTGCAAGGCTTGAGCAAGGCCGACTGCATTCTGCTTGGCGGAT GCACCGCCGCATTGAGCCTGGAGCGCAGCCCGGGTGCATCCTGGCGCGCTGCGGACCTGGCCGTCGAACTGGGTCTGCCG CTGTACGCCATGCCAGGGCCGCTCGCCCAGGAAGCCGGAGCATTACCGATCAACACACTGCCTATTTCATTGAGTCGGAC ATGA
Upstream 100 bases:
>100_bases CGTTGTAACAAATACGCCCGGCCGCAAGGCCGGGTCGTATGCAAAAAGGGGCGACTTTCGGGTCGCCCCTCTTTTATTTT TAAAGTGAACACGCCAGCTT
Downstream 100 bases:
>100_bases TCTCAGAACAGCCACTGGTTAACTCCGACCCGACCGCTCAGCCACCCGGCAATACACGCCTCAATGGTGCCATCACCGGC CTGTATGGCGATGTGCTGCA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Family 2 Glycosyl Transferase; Methyltransferase FkbM Family; Glycosyl Transferase Group 2 Family Protein; Bifunctional SAM-Dependent Methyltransferase Type; Glycosyl Transferase Group 2 Family; FkbM Family Methyltransferase; DTDP-Rhamnosyl Transferase RfbF
Number of amino acids: Translated: 827; Mature: 826
Protein sequence:
>827_residues MSRHLDRGRETLMDMFHRHRQADEHDLATVALECALQIPEYRPEALVWKGIEALPQAPKLAFIYLLNAANAFPLRADIHA LLGRSIIAQGQPLLANRYMSNAWQKLPADASLRMMLWQARSLSETPEDLRRVILAHLPDITAANELALVLKLLAAQTGLP GTLGVVRYLPDVQEIHGWAIDVHNVQTPVSLQLEANGHLISMVASAPHPLLTAAGLPATHGGIRIKVPNATPAIHVRFDN GAALLGSPLSAMPTFIAPPAALKVGDKQPVDVLIPVYDGLEETLECINSALEARKRNRTPHRLVVIEDATPVPALRKALK VLAGKGKITLVQNPINLGFIRSMNRAMALSPRQDVVWLNADTRVQGDWLDRLRTTAYADETIASVTPFTNNGELMSFPES RFSHPMPSAAEQARLDDLARMTGSPAMELETGCGFCLYIKRSALDSVGYLDEVELLRGYGEETDWCLRARGLGWRHVGAP NVFVAHQGGISFGAEKALRVAHNNAILKRRYPDASSRYENFCLRDPIRPARQALQRARLVQLAEQLSTPALRQLHIANSA ASQAPLSLTWRNKGQHAQATLQANLLPLAFSLDYELPADTEQLLQDLRSLPLDELIYQNLANCPAALCALAEQLDKPYRI ICRDDALLTPDSRFDWVDFARKAQSIELPWHALRERYAAALPQADILIRPAPQALPNNDSVPTTLLIADRLSDPDIAKHW LEVGRRITHENQSLVLLVAEDGPWVAPLLATGAIHALPIVQGLSKADCILLGGCTAALSLERSPGASWRAADLAVELGLP LYAMPGPLAQEAGALPINTLPISLSRT
Sequences:
>Translated_827_residues MSRHLDRGRETLMDMFHRHRQADEHDLATVALECALQIPEYRPEALVWKGIEALPQAPKLAFIYLLNAANAFPLRADIHA LLGRSIIAQGQPLLANRYMSNAWQKLPADASLRMMLWQARSLSETPEDLRRVILAHLPDITAANELALVLKLLAAQTGLP GTLGVVRYLPDVQEIHGWAIDVHNVQTPVSLQLEANGHLISMVASAPHPLLTAAGLPATHGGIRIKVPNATPAIHVRFDN GAALLGSPLSAMPTFIAPPAALKVGDKQPVDVLIPVYDGLEETLECINSALEARKRNRTPHRLVVIEDATPVPALRKALK VLAGKGKITLVQNPINLGFIRSMNRAMALSPRQDVVWLNADTRVQGDWLDRLRTTAYADETIASVTPFTNNGELMSFPES RFSHPMPSAAEQARLDDLARMTGSPAMELETGCGFCLYIKRSALDSVGYLDEVELLRGYGEETDWCLRARGLGWRHVGAP NVFVAHQGGISFGAEKALRVAHNNAILKRRYPDASSRYENFCLRDPIRPARQALQRARLVQLAEQLSTPALRQLHIANSA ASQAPLSLTWRNKGQHAQATLQANLLPLAFSLDYELPADTEQLLQDLRSLPLDELIYQNLANCPAALCALAEQLDKPYRI ICRDDALLTPDSRFDWVDFARKAQSIELPWHALRERYAAALPQADILIRPAPQALPNNDSVPTTLLIADRLSDPDIAKHW LEVGRRITHENQSLVLLVAEDGPWVAPLLATGAIHALPIVQGLSKADCILLGGCTAALSLERSPGASWRAADLAVELGLP LYAMPGPLAQEAGALPINTLPISLSRT >Mature_826_residues SRHLDRGRETLMDMFHRHRQADEHDLATVALECALQIPEYRPEALVWKGIEALPQAPKLAFIYLLNAANAFPLRADIHAL LGRSIIAQGQPLLANRYMSNAWQKLPADASLRMMLWQARSLSETPEDLRRVILAHLPDITAANELALVLKLLAAQTGLPG TLGVVRYLPDVQEIHGWAIDVHNVQTPVSLQLEANGHLISMVASAPHPLLTAAGLPATHGGIRIKVPNATPAIHVRFDNG AALLGSPLSAMPTFIAPPAALKVGDKQPVDVLIPVYDGLEETLECINSALEARKRNRTPHRLVVIEDATPVPALRKALKV LAGKGKITLVQNPINLGFIRSMNRAMALSPRQDVVWLNADTRVQGDWLDRLRTTAYADETIASVTPFTNNGELMSFPESR FSHPMPSAAEQARLDDLARMTGSPAMELETGCGFCLYIKRSALDSVGYLDEVELLRGYGEETDWCLRARGLGWRHVGAPN VFVAHQGGISFGAEKALRVAHNNAILKRRYPDASSRYENFCLRDPIRPARQALQRARLVQLAEQLSTPALRQLHIANSAA SQAPLSLTWRNKGQHAQATLQANLLPLAFSLDYELPADTEQLLQDLRSLPLDELIYQNLANCPAALCALAEQLDKPYRII CRDDALLTPDSRFDWVDFARKAQSIELPWHALRERYAAALPQADILIRPAPQALPNNDSVPTTLLIADRLSDPDIAKHWL EVGRRITHENQSLVLLVAEDGPWVAPLLATGAIHALPIVQGLSKADCILLGGCTAALSLERSPGASWRAADLAVELGLPL YAMPGPLAQEAGALPINTLPISLSRT
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90564; Mature: 90433
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHLDRGRETLMDMFHRHRQADEHDLATVALECALQIPEYRPEALVWKGIEALPQAPKL CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHCCCCCCE AFIYLLNAANAFPLRADIHALLGRSIIAQGQPLLANRYMSNAWQKLPADASLRMMLWQAR EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH SLSETPEDLRRVILAHLPDITAANELALVLKLLAAQTGLPGTLGVVRYLPDVQEIHGWAI CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCEEE DVHNVQTPVSLQLEANGHLISMVASAPHPLLTAAGLPATHGGIRIKVPNATPAIHVRFDN EECCCCCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCEEEEEECC GAALLGSPLSAMPTFIAPPAALKVGDKQPVDVLIPVYDGLEETLECINSALEARKRNRTP CCEEECCCHHHCCHHCCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCC HRLVVIEDATPVPALRKALKVLAGKGKITLVQNPINLGFIRSMNRAMALSPRQDVVWLNA CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCHHHCCCCCCCEEEECC DTRVQGDWLDRLRTTAYADETIASVTPFTNNGELMSFPESRFSHPMPSAAEQARLDDLAR CCEECHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHHH MTGSPAMELETGCGFCLYIKRSALDSVGYLDEVELLRGYGEETDWCLRARGLGWRHVGAP HCCCCCEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCEEECCCC NVFVAHQGGISFGAEKALRVAHNNAILKRRYPDASSRYENFCLRDPIRPARQALQRARLV CEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHCCHHCCCCHHHHHHHHHHHHH QLAEQLSTPALRQLHIANSAASQAPLSLTWRNKGQHAQATLQANLLPLAFSLDYELPADT HHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECEEEEEEEECCCCCCCH EQLLQDLRSLPLDELIYQNLANCPAALCALAEQLDKPYRIICRDDALLTPDSRFDWVDFA HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCEECCCCCCCHHHHH RKAQSIELPWHALRERYAAALPQADILIRPAPQALPNNDSVPTTLLIADRLSDPDIAKHW HHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHH LEVGRRITHENQSLVLLVAEDGPWVAPLLATGAIHALPIVQGLSKADCILLGGCTAALSL HHHHHHHCCCCCEEEEEEECCCCEEHHHHHHCHHHHHHHHHCCCCCCEEEEECCCEEEEE ERSPGASWRAADLAVELGLPLYAMPGPLAQEAGALPINTLPISLSRT ECCCCCCCCHHHEEEECCCCEEECCCCHHHHCCCCCCEEEEEEEECC >Mature Secondary Structure SRHLDRGRETLMDMFHRHRQADEHDLATVALECALQIPEYRPEALVWKGIEALPQAPKL CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHCCCCCCE AFIYLLNAANAFPLRADIHALLGRSIIAQGQPLLANRYMSNAWQKLPADASLRMMLWQAR EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH SLSETPEDLRRVILAHLPDITAANELALVLKLLAAQTGLPGTLGVVRYLPDVQEIHGWAI CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCEEE DVHNVQTPVSLQLEANGHLISMVASAPHPLLTAAGLPATHGGIRIKVPNATPAIHVRFDN EECCCCCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCEEEEEECC GAALLGSPLSAMPTFIAPPAALKVGDKQPVDVLIPVYDGLEETLECINSALEARKRNRTP CCEEECCCHHHCCHHCCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCC HRLVVIEDATPVPALRKALKVLAGKGKITLVQNPINLGFIRSMNRAMALSPRQDVVWLNA CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCHHHCCCCCCCEEEECC DTRVQGDWLDRLRTTAYADETIASVTPFTNNGELMSFPESRFSHPMPSAAEQARLDDLAR CCEECHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHHH MTGSPAMELETGCGFCLYIKRSALDSVGYLDEVELLRGYGEETDWCLRARGLGWRHVGAP HCCCCCEEECCCCCEEEEEEHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCEEECCCC NVFVAHQGGISFGAEKALRVAHNNAILKRRYPDASSRYENFCLRDPIRPARQALQRARLV CEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHCCHHCCCCHHHHHHHHHHHHH QLAEQLSTPALRQLHIANSAASQAPLSLTWRNKGQHAQATLQANLLPLAFSLDYELPADT HHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECEEEEEEEECCCCCCCH EQLLQDLRSLPLDELIYQNLANCPAALCALAEQLDKPYRIICRDDALLTPDSRFDWVDFA HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCEECCCCCCCHHHHH RKAQSIELPWHALRERYAAALPQADILIRPAPQALPNNDSVPTTLLIADRLSDPDIAKHW HHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHH LEVGRRITHENQSLVLLVAEDGPWVAPLLATGAIHALPIVQGLSKADCILLGGCTAALSL HHHHHHHCCCCCEEEEEEECCCCEEHHHHHHCHHHHHHHHHCCCCCCEEEEECCCEEEEE ERSPGASWRAADLAVELGLPLYAMPGPLAQEAGALPINTLPISLSRT ECCCCCCCCHHHEEEECCCCEEECCCCHHHHCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA