Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 66044168

GI number: 66044168

Start: 1036243

End: 1038300

Strand: Direct

Name: mcp4 [H]

Synonym: Psyr_0913

Alternate gene names: 66044168

Gene position: 1036243-1038300 (Clockwise)

Preceding gene: 66044166

Following gene: 66044172

Centisome position: 17.01

GC content: 61.71

Gene sequence:

>2058_bases
ATGAACAGTCTTTTGTCACCAGGCATGCGCCTGATGGGACATTTTGGTTTTGCTCGCAAGTTTCAGGTCTTGTTCCTGCT
GTTCATGTTGCCGCTGGCGGGCAGCGCATGGGTCATCACCAAGGAATACAGCAACAAGCTCGATGTCATATCCGGGGAGC
AATCCGGCGTGCGTCAACTGCTGGCCCTCGACGATCTGAACATCGAGTTGTCCGCCCAGCGCGATCATGCCGCACGCTGG
AAAGCGGCCGACATTCTGCGCGAGCCAACCCCGGCGGCGAAGGCGGCGATGGCCAGCGTCGATGCAGGGATACCTCGAAT
TGCCAACGCGCTGCAGGGCGTTCAGGCCGTATTGGTTGAAGAGAAAGCTCCTGCCGACACCATGAACCGTTTCAAGGCGC
TTCAAGCTGCGGTCACCGGTCTGGACACGGCATCATTGCGCACGGTGGGCTGGTGGCCTGATGGCTACGACCGCTTCACC
ACGGTGCTGAATCTGGTCCAGGCGCTGCGTGAGCAGATCGCGATGGACAGCGGTTTGATTCTCGACCCCTGGCTTGAAAC
CTACATGCTGATGCAGCTTTCCACCCAGCAAGTGCCGGACCTGATCGAGCGTATCGGTCGTCTGTCGAGTGTGGGGCAGA
CGTCGGTGGCATCGGGGCAGTTCAGCCTGCAGAGCCGTCTGCAAATGCGCGACCTGCGTGGTCGCATCGATGACTCCAAG
GATCAGATGCAAAAGGCCGCCGGCCTGCTGCTGTCCAAGCTTCCCGAGCAGTTGCAGCCGTGGGCCGACAAGTACGCTGC
GGTGATGCAAGTGCTGGAAGCACAGCTGAAGGTCATTGACGAAGGTGTTTTCGGCGGCAGCATCAAGCTCAAACCGGAAG
AGTTTGAAAAGAGCATCGACACGCTGACCAGCAGCACGGCGGATTTGCGCAGGCAATCGCTTGACGCGCTCAATGGACGC
CTCGATTACTACCATGAGAACTCCAACACGGAGTTCATCCCGATGGCGGTGGTCTTCTGTGTTCTGGTGATCATGGCGAT
CTATCTGTTCGCCTGTCTGCAATCCTCGATTCGCAACAGCGCCAGAGGCATCACCACGCTGGCTGAATCCCTGCGTGACG
GCAATCTGTGTGTGGAAGTGGCTGTGCAGGGCCGTGACGAGCTGGCTGCCATCAGCCGCGCGCTGAACGTCGCGGTAGTG
CAGCTGCGTACCAGCCTGCTGGGTGTCAATCAGGAAACCGTTCGCGTCGGCGACGCCGTGCTGACGCTGAGTGCTCAGTC
CAGCGGGACGCTCACCGAAGTCGAGGACCAGCAACAACAGATCAGTCAGATCGCCGCCGCAGCCACCGAGCTGGCTGCCA
CTTCCCAAGGCGTGGCGAGAAGCTGTGAGCAAGCATCGGAAAGCGCCCGGCAGACGCGCCAGATTGCTCAGCAAAGCAGC
CAGGACAGCCAGCGCACCACCGACAGCATTCAGCAGCTCAATCAGCGGCTGACCGAGACTGCTGCCGCGCTGGGCCGGGT
CAGCGAGCAGGGCCAGCAGATTCAATCGGTGGTGGATGCCATTCGCGGCATCGCCGAACAGACCAACCTGCTGGCCCTCA
ACGCAGCCATCGAGGCGGCACGCGCCGGCGAGCAAGGGCGCGGGTTCGCCGTGGTTGCCGATGAAGTGCGCAGCCTGTCC
CAGCGTACCCAGGCCTCGACCGCTCAGATCGCCGGCACGGTCGACAGCTTGCGCTCCACCGTGACGCAGGCGGTCAACCT
GATGGAAGCGGCCTGCGGGCAAGCCGTCAACGATGCGCAGTCGGTAACCGGCCTGGGCATCCGCCTGGGCGAAATCGCCA
CGGCAGTGCAGGGTGTCACCGATACGCTGGCGCAGATATCGACCGCCGTGGAAGAACAGGCAACGACCGCTGATGAAGTG
AGCAGCAACATCCAGCAGGTCGATCAGGCCGCAGGGCGTTTGCTGGAAGGCGCCCGTGCGGTCAATCAGGCGGCGGATAC
CTTGAGTCAGGGCAGTCGGGCGTTGAATGACAATACGGCGCGGTTTCGGTTGGGGTGA

Upstream 100 bases:

>100_bases
TGAAACAAGAACATGGCATTTTGCTGTTAGTGTTTTTCCAACAAAAGGCATCGCCTCTGTTTGTGCAGATCTGGCAGGTG
TTCACCGGGAGTCGCAGGAC

Downstream 100 bases:

>100_bases
TACGTCAAGTGGTCAGTAAAAAGCCCCAGTGATGGGGCTTTTTTTATTCATCGAGAGACGACATTCATTTCAGCAGGTCG
TGATAGACCTGCACAGTCGA

Product: histidine kinase, HAMP region: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MNSLLSPGMRLMGHFGFARKFQVLFLLFMLPLAGSAWVITKEYSNKLDVISGEQSGVRQLLALDDLNIELSAQRDHAARW
KAADILREPTPAAKAAMASVDAGIPRIANALQGVQAVLVEEKAPADTMNRFKALQAAVTGLDTASLRTVGWWPDGYDRFT
TVLNLVQALREQIAMDSGLILDPWLETYMLMQLSTQQVPDLIERIGRLSSVGQTSVASGQFSLQSRLQMRDLRGRIDDSK
DQMQKAAGLLLSKLPEQLQPWADKYAAVMQVLEAQLKVIDEGVFGGSIKLKPEEFEKSIDTLTSSTADLRRQSLDALNGR
LDYYHENSNTEFIPMAVVFCVLVIMAIYLFACLQSSIRNSARGITTLAESLRDGNLCVEVAVQGRDELAAISRALNVAVV
QLRTSLLGVNQETVRVGDAVLTLSAQSSGTLTEVEDQQQQISQIAAAATELAATSQGVARSCEQASESARQTRQIAQQSS
QDSQRTTDSIQQLNQRLTETAAALGRVSEQGQQIQSVVDAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLS
QRTQASTAQIAGTVDSLRSTVTQAVNLMEAACGQAVNDAQSVTGLGIRLGEIATAVQGVTDTLAQISTAVEEQATTADEV
SSNIQQVDQAAGRLLEGARAVNQAADTLSQGSRALNDNTARFRLG

Sequences:

>Translated_685_residues
MNSLLSPGMRLMGHFGFARKFQVLFLLFMLPLAGSAWVITKEYSNKLDVISGEQSGVRQLLALDDLNIELSAQRDHAARW
KAADILREPTPAAKAAMASVDAGIPRIANALQGVQAVLVEEKAPADTMNRFKALQAAVTGLDTASLRTVGWWPDGYDRFT
TVLNLVQALREQIAMDSGLILDPWLETYMLMQLSTQQVPDLIERIGRLSSVGQTSVASGQFSLQSRLQMRDLRGRIDDSK
DQMQKAAGLLLSKLPEQLQPWADKYAAVMQVLEAQLKVIDEGVFGGSIKLKPEEFEKSIDTLTSSTADLRRQSLDALNGR
LDYYHENSNTEFIPMAVVFCVLVIMAIYLFACLQSSIRNSARGITTLAESLRDGNLCVEVAVQGRDELAAISRALNVAVV
QLRTSLLGVNQETVRVGDAVLTLSAQSSGTLTEVEDQQQQISQIAAAATELAATSQGVARSCEQASESARQTRQIAQQSS
QDSQRTTDSIQQLNQRLTETAAALGRVSEQGQQIQSVVDAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLS
QRTQASTAQIAGTVDSLRSTVTQAVNLMEAACGQAVNDAQSVTGLGIRLGEIATAVQGVTDTLAQISTAVEEQATTADEV
SSNIQQVDQAAGRLLEGARAVNQAADTLSQGSRALNDNTARFRLG
>Mature_685_residues
MNSLLSPGMRLMGHFGFARKFQVLFLLFMLPLAGSAWVITKEYSNKLDVISGEQSGVRQLLALDDLNIELSAQRDHAARW
KAADILREPTPAAKAAMASVDAGIPRIANALQGVQAVLVEEKAPADTMNRFKALQAAVTGLDTASLRTVGWWPDGYDRFT
TVLNLVQALREQIAMDSGLILDPWLETYMLMQLSTQQVPDLIERIGRLSSVGQTSVASGQFSLQSRLQMRDLRGRIDDSK
DQMQKAAGLLLSKLPEQLQPWADKYAAVMQVLEAQLKVIDEGVFGGSIKLKPEEFEKSIDTLTSSTADLRRQSLDALNGR
LDYYHENSNTEFIPMAVVFCVLVIMAIYLFACLQSSIRNSARGITTLAESLRDGNLCVEVAVQGRDELAAISRALNVAVV
QLRTSLLGVNQETVRVGDAVLTLSAQSSGTLTEVEDQQQQISQIAAAATELAATSQGVARSCEQASESARQTRQIAQQSS
QDSQRTTDSIQQLNQRLTETAAALGRVSEQGQQIQSVVDAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLS
QRTQASTAQIAGTVDSLRSTVTQAVNLMEAACGQAVNDAQSVTGLGIRLGEIATAVQGVTDTLAQISTAVEEQATTADEV
SSNIQQVDQAAGRLLEGARAVNQAADTLSQGSRALNDNTARFRLG

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=337, Percent_Identity=30.2670623145401, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI2367378, Length=322, Percent_Identity=32.2981366459627, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1787690, Length=433, Percent_Identity=27.9445727482679, Blast_Score=111, Evalue=2e-25,
Organism=Escherichia coli, GI1788195, Length=276, Percent_Identity=30.4347826086957, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1789453, Length=319, Percent_Identity=28.2131661442006, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73675; Mature: 73675

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLSPGMRLMGHFGFARKFQVLFLLFMLPLAGSAWVITKEYSNKLDVISGEQSGVRQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHH
LALDDLNIELSAQRDHAARWKAADILREPTPAAKAAMASVDAGIPRIANALQGVQAVLVE
HHHCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EKAPADTMNRFKALQAAVTGLDTASLRTVGWWPDGYDRFTTVLNLVQALREQIAMDSGLI
CCCCHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
LDPWLETYMLMQLSTQQVPDLIERIGRLSSVGQTSVASGQFSLQSRLQMRDLRGRIDDSK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCCH
DQMQKAAGLLLSKLPEQLQPWADKYAAVMQVLEAQLKVIDEGVFGGSIKLKPEEFEKSID
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
TLTSSTADLRRQSLDALNGRLDYYHENSNTEFIPMAVVFCVLVIMAIYLFACLQSSIRNS
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGITTLAESLRDGNLCVEVAVQGRDELAAISRALNVAVVQLRTSLLGVNQETVRVGDAV
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEE
LTLSAQSSGTLTEVEDQQQQISQIAAAATELAATSQGVARSCEQASESARQTRQIAQQSS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDSQRTTDSIQQLNQRLTETAAALGRVSEQGQQIQSVVDAIRGIAEQTNLLALNAAIEAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RAGEQGRGFAVVADEVRSLSQRTQASTAQIAGTVDSLRSTVTQAVNLMEAACGQAVNDAQ
HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTGLGIRLGEIATAVQGVTDTLAQISTAVEEQATTADEVSSNIQQVDQAAGRLLEGARA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VNQAADTLSQGSRALNDNTARFRLG
HHHHHHHHHHCCHHCCCCCCEEECC
>Mature Secondary Structure
MNSLLSPGMRLMGHFGFARKFQVLFLLFMLPLAGSAWVITKEYSNKLDVISGEQSGVRQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHH
LALDDLNIELSAQRDHAARWKAADILREPTPAAKAAMASVDAGIPRIANALQGVQAVLVE
HHHCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EKAPADTMNRFKALQAAVTGLDTASLRTVGWWPDGYDRFTTVLNLVQALREQIAMDSGLI
CCCCHHHHHHHHHHHHHHHCCCHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
LDPWLETYMLMQLSTQQVPDLIERIGRLSSVGQTSVASGQFSLQSRLQMRDLRGRIDDSK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCCH
DQMQKAAGLLLSKLPEQLQPWADKYAAVMQVLEAQLKVIDEGVFGGSIKLKPEEFEKSID
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
TLTSSTADLRRQSLDALNGRLDYYHENSNTEFIPMAVVFCVLVIMAIYLFACLQSSIRNS
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGITTLAESLRDGNLCVEVAVQGRDELAAISRALNVAVVQLRTSLLGVNQETVRVGDAV
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEE
LTLSAQSSGTLTEVEDQQQQISQIAAAATELAATSQGVARSCEQASESARQTRQIAQQSS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDSQRTTDSIQQLNQRLTETAAALGRVSEQGQQIQSVVDAIRGIAEQTNLLALNAAIEAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RAGEQGRGFAVVADEVRSLSQRTQASTAQIAGTVDSLRSTVTQAVNLMEAACGQAVNDAQ
HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVTGLGIRLGEIATAVQGVTDTLAQISTAVEEQATTADEVSSNIQQVDQAAGRLLEGARA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VNQAADTLSQGSRALNDNTARFRLG
HHHHHHHHHHCCHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]