| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044148
Identifier: 66044148
GI number: 66044148
Start: 1013760
End: 1014335
Strand: Direct
Name: 66044148
Synonym: Psyr_0893
Alternate gene names: NA
Gene position: 1013760-1014335 (Clockwise)
Preceding gene: 66044145
Following gene: 66044159
Centisome position: 16.64
GC content: 52.78
Gene sequence:
>576_bases ATGGGTACTCATGTCACGCACGCTTCGTTCTCGCAGGTCCGACTCGCCAGCCTGTTGTTATTGGTCATCGTTTGCACGGG GCTTTTTTTCGCGCCAGAGCGATCACAGGCTGAGGTTGCAAACCTGGCGACTTGTCCGGTAGGAACTCACACCGCAACGT GGTCGCCAGGAGTGACCAATACCGCCAAGACTACCGACGTGGTGACGACAAGCAATTGGGGACCGTGTGTTTTACCTTCA TTTCCCCTGGTAGTCAGCGCTTCGTCCATACAAAGTTTTCAGGCCCCTTTATCCTGTCAGTCTTTACTGCTGCAAACGTC CAATGTGGTATGGATCATCACCTGGAGCGATGGGGTGACCAGCACTTACACGTTCAATACGAGTTTCAATACTGTGAACG GTCTGATTACAGCCGTTCTGGGTGTCGGGACAATTACAGATGGCCGTTTCAAGGACGCCACTGCGTTGAGTACATTTGAG CTTGTTAATTTTCAGGCCGCGTTGAATAACAGCTGCGGCACTACGACCGGTGTCACCGGTGTCAGCGGCCTTTCAACGCT GGTCATTACCCCGTAA
Upstream 100 bases:
>100_bases ACGGGCCTTGCGACCATTAGCTGTCATTTCTGACAGTAGAGTGAAAAATGCTTTTTGCTTAATCTGACTTTTGGAGACCA TCAACGTCAGGGAGACAATC
Downstream 100 bases:
>100_bases TGACAGACGCCAGGCTCGCACGCATAAGGCCTGCTACAAACTCTTGTCTTGCAGGCCGACCCCCAACCTCATCTACCCCC CCATGCCTTAAAAAGGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MGTHVTHASFSQVRLASLLLLVIVCTGLFFAPERSQAEVANLATCPVGTHTATWSPGVTNTAKTTDVVTTSNWGPCVLPS FPLVVSASSIQSFQAPLSCQSLLLQTSNVVWIITWSDGVTSTYTFNTSFNTVNGLITAVLGVGTITDGRFKDATALSTFE LVNFQAALNNSCGTTTGVTGVSGLSTLVITP
Sequences:
>Translated_191_residues MGTHVTHASFSQVRLASLLLLVIVCTGLFFAPERSQAEVANLATCPVGTHTATWSPGVTNTAKTTDVVTTSNWGPCVLPS FPLVVSASSIQSFQAPLSCQSLLLQTSNVVWIITWSDGVTSTYTFNTSFNTVNGLITAVLGVGTITDGRFKDATALSTFE LVNFQAALNNSCGTTTGVTGVSGLSTLVITP >Mature_190_residues GTHVTHASFSQVRLASLLLLVIVCTGLFFAPERSQAEVANLATCPVGTHTATWSPGVTNTAKTTDVVTTSNWGPCVLPSF PLVVSASSIQSFQAPLSCQSLLLQTSNVVWIITWSDGVTSTYTFNTSFNTVNGLITAVLGVGTITDGRFKDATALSTFEL VNFQAALNNSCGTTTGVTGVSGLSTLVITP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19908; Mature: 19777
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTHVTHASFSQVRLASLLLLVIVCTGLFFAPERSQAEVANLATCPVGTHTATWSPGVTN CCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHEEECCCCCCCCCCCCCCCC TAKTTDVVTTSNWGPCVLPSFPLVVSASSIQSFQAPLSCQSLLLQTSNVVWIITWSDGVT CCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCC STYTFNTSFNTVNGLITAVLGVGTITDGRFKDATALSTFELVNFQAALNNSCGTTTGVTG EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC VSGLSTLVITP CCCCEEEEECC >Mature Secondary Structure GTHVTHASFSQVRLASLLLLVIVCTGLFFAPERSQAEVANLATCPVGTHTATWSPGVTN CCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHEEECCCCCCCCCCCCCCCC TAKTTDVVTTSNWGPCVLPSFPLVVSASSIQSFQAPLSCQSLLLQTSNVVWIITWSDGVT CCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCC STYTFNTSFNTVNGLITAVLGVGTITDGRFKDATALSTFELVNFQAALNNSCGTTTGVTG EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC VSGLSTLVITP CCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA