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The map label for this gene is phoD [H]

Identifier: 66044127

GI number: 66044127

Start: 994272

End: 995843

Strand: Reverse

Name: phoD [H]

Synonym: Psyr_0872

Alternate gene names: 66044127

Gene position: 995843-994272 (Counterclockwise)

Preceding gene: 66044128

Following gene: 66044125

Centisome position: 16.34

GC content: 63.61

Gene sequence:

>1572_bases
ATGACCGATTTCAACCCGGACCGTCGACGCATCATTACCGGAGTCGCCGGTGCCACATTACTGTCGATCCTCAGCCCGTT
TGCGCGCAGCGCGGGGGTCGATTACCCGTTCGCGCTCGGCGTGGCGTCTGGCGATCCGTTGCCGGACGGCTTCGTGATAT
GGACACGCCTGGCGCCCAAGGTGATGACGCCCTCGGGCGATGGCGGGCTGAACAAACCCGTTGAGGTGCGCTGGAAGATC
GCCAGCGATGCGGCCATGGTTCACGTAGTCCGCACAGGACAGGCCACCGCCCACCCGCGCCTTGCCCATTCGGTGCATGT
CGAAGTAAGCGGCTTGCAGCCTGGGCGTCCTTATTGGTATCAGTTCGAGAGCCTGGGGGCGCAAAGCGCTGTCGGTCAGG
CCTGCACTGCACCGCTGGCAAGCGCGATGGTCTCGGCGCGGTTTGGCTTCGTGTCGTGTTCACACTGGGAAGCCGGATAC
TTCAGCGCCTATCGACACCTGGCCGCGGAGCGCCCGGATCTGGTGTTCTTTCTTGGCGACTACATCTATGAGATGAACGT
ATCCTCGGAAAGCCCTCGGTTCCCGCGTCACCACGCGACACCTGACCCCATGGACCTGGCGGGCTATCGCAACCGATACG
CGCAGTACAAGACCGACCCCGACCTGCAAGCGCTGCATGCCTGTGCGCCGAGCGTCGCCACCTGGGACGACCATGAAGTG
CAAAATGACTACGCCGCCCAGTGGTCCCAGGACCCCGACGTGCCGGTGGACAGCTTTCTGCGCCGCAGGGCCGCCGCCTA
CCAGGCGTTTTACGAACACATGCCGTTGCGCGCCAGCAGCCTGCCCAAAGGACAGGAAATGCGTATCTACCGCAACCTCG
ACTATGGGCGTCTGGCACGTTTTCACGTGCTGGACGGTCGACAGTACCGCTCCGAGCAACCCTGCATCCAGGCCAACGGC
AGCCGTCGAGGTCACGTCGCGCCCAGCGACTGCCCGGATCTGCGTGACCCGAAACGCACCATGCTCGGTTGGGAACAGGA
AACCTGGCTGGACCGCAGCTTCGCCGAGTCTCCCGGACAGTGGAATGTCATTGCCCAGGATTTGCTGGTCGCGCCACTGG
AACAGCGCGATCTCAAGACCCAGGCGCAGGGCCACTGGACCGACGGCTGGGACGGCTACATGACCACCCGCGAGCGCGTG
CTGGCCTCCCTGCAACGCCACCAGACCCGCAACCCGGTGTTCTGGGGTGGCGATATCCATTCGTTCTGGACCACCGACCT
GCACGCCGACGCCGGCAATCCGGATTCAGCCATCGTCGCCACCGAATTCGTCGGCACTTCGGTAACCTCCAGCGGGCCAC
CGTTCGACGCCTTCAACAGCATTCTCGGCCTCAACCCACACGTGAAGTTCTTCGACAGCCGTCAACGCGGCTACGTGGCA
GTCGACCTGAACGAACAGCACATGCAGACCCGCTTTCAAGTGGTGTCGGATGTGCTGGACCCTGCGGCGAGCTTGTCGAC
GCTGAAGCGTTTTGTGGTGGAGGCTGGCAAGGCGGGGGCTGTTGCGGTGTGA

Upstream 100 bases:

>100_bases
AGGGCTGTACCAGAGAGGCATTTCTGAAAAACGGTGTGTTCAAGAACATGTTGCTGTTCGGGCTGTTGCGCTCCGAATAC
GCATCATCGGAGGCCACGTC

Downstream 100 bases:

>100_bases
CGCCTGAACATGAGTCAACATTGAAACGCCTAAAGCCCGCATTGACGGGCCTTAGGCATTTGCGCCATGCAGCGGAGGCA
CAGCAGGATCATTTCAACTG

Product: alkaline phosphatase

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MTDFNPDRRRIITGVAGATLLSILSPFARSAGVDYPFALGVASGDPLPDGFVIWTRLAPKVMTPSGDGGLNKPVEVRWKI
ASDAAMVHVVRTGQATAHPRLAHSVHVEVSGLQPGRPYWYQFESLGAQSAVGQACTAPLASAMVSARFGFVSCSHWEAGY
FSAYRHLAAERPDLVFFLGDYIYEMNVSSESPRFPRHHATPDPMDLAGYRNRYAQYKTDPDLQALHACAPSVATWDDHEV
QNDYAAQWSQDPDVPVDSFLRRRAAAYQAFYEHMPLRASSLPKGQEMRIYRNLDYGRLARFHVLDGRQYRSEQPCIQANG
SRRGHVAPSDCPDLRDPKRTMLGWEQETWLDRSFAESPGQWNVIAQDLLVAPLEQRDLKTQAQGHWTDGWDGYMTTRERV
LASLQRHQTRNPVFWGGDIHSFWTTDLHADAGNPDSAIVATEFVGTSVTSSGPPFDAFNSILGLNPHVKFFDSRQRGYVA
VDLNEQHMQTRFQVVSDVLDPAASLSTLKRFVVEAGKAGAVAV

Sequences:

>Translated_523_residues
MTDFNPDRRRIITGVAGATLLSILSPFARSAGVDYPFALGVASGDPLPDGFVIWTRLAPKVMTPSGDGGLNKPVEVRWKI
ASDAAMVHVVRTGQATAHPRLAHSVHVEVSGLQPGRPYWYQFESLGAQSAVGQACTAPLASAMVSARFGFVSCSHWEAGY
FSAYRHLAAERPDLVFFLGDYIYEMNVSSESPRFPRHHATPDPMDLAGYRNRYAQYKTDPDLQALHACAPSVATWDDHEV
QNDYAAQWSQDPDVPVDSFLRRRAAAYQAFYEHMPLRASSLPKGQEMRIYRNLDYGRLARFHVLDGRQYRSEQPCIQANG
SRRGHVAPSDCPDLRDPKRTMLGWEQETWLDRSFAESPGQWNVIAQDLLVAPLEQRDLKTQAQGHWTDGWDGYMTTRERV
LASLQRHQTRNPVFWGGDIHSFWTTDLHADAGNPDSAIVATEFVGTSVTSSGPPFDAFNSILGLNPHVKFFDSRQRGYVA
VDLNEQHMQTRFQVVSDVLDPAASLSTLKRFVVEAGKAGAVAV
>Mature_522_residues
TDFNPDRRRIITGVAGATLLSILSPFARSAGVDYPFALGVASGDPLPDGFVIWTRLAPKVMTPSGDGGLNKPVEVRWKIA
SDAAMVHVVRTGQATAHPRLAHSVHVEVSGLQPGRPYWYQFESLGAQSAVGQACTAPLASAMVSARFGFVSCSHWEAGYF
SAYRHLAAERPDLVFFLGDYIYEMNVSSESPRFPRHHATPDPMDLAGYRNRYAQYKTDPDLQALHACAPSVATWDDHEVQ
NDYAAQWSQDPDVPVDSFLRRRAAAYQAFYEHMPLRASSLPKGQEMRIYRNLDYGRLARFHVLDGRQYRSEQPCIQANGS
RRGHVAPSDCPDLRDPKRTMLGWEQETWLDRSFAESPGQWNVIAQDLLVAPLEQRDLKTQAQGHWTDGWDGYMTTRERVL
ASLQRHQTRNPVFWGGDIHSFWTTDLHADAGNPDSAIVATEFVGTSVTSSGPPFDAFNSILGLNPHVKFFDSRQRGYVAV
DLNEQHMQTRFQVVSDVLDPAASLSTLKRFVVEAGKAGAVAV

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58164; Mature: 58032

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFNPDRRRIITGVAGATLLSILSPFARSAGVDYPFALGVASGDPLPDGFVIWTRLAPK
CCCCCCCHHHEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCE
VMTPSGDGGLNKPVEVRWKIASDAAMVHVVRTGQATAHPRLAHSVHVEVSGLQPGRPYWY
EECCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEE
QFESLGAQSAVGQACTAPLASAMVSARFGFVSCSHWEAGYFSAYRHLAAERPDLVFFLGD
EHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCEEEEECC
YIYEMNVSSESPRFPRHHATPDPMDLAGYRNRYAQYKTDPDLQALHACAPSVATWDDHEV
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHH
QNDYAAQWSQDPDVPVDSFLRRRAAAYQAFYEHMPLRASSLPKGQEMRIYRNLDYGRLAR
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHEEE
FHVLDGRQYRSEQPCIQANGSRRGHVAPSDCPDLRDPKRTMLGWEQETWLDRSFAESPGQ
EEEECCHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC
WNVIAQDLLVAPLEQRDLKTQAQGHWTDGWDGYMTTRERVLASLQRHQTRNPVFWGGDIH
CHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCC
SFWTTDLHADAGNPDSAIVATEFVGTSVTSSGPPFDAFNSILGLNPHVKFFDSRQRGYVA
CCCCCCEECCCCCCCCEEEEEEHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEE
VDLNEQHMQTRFQVVSDVLDPAASLSTLKRFVVEAGKAGAVAV
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDFNPDRRRIITGVAGATLLSILSPFARSAGVDYPFALGVASGDPLPDGFVIWTRLAPK
CCCCCCHHHEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCE
VMTPSGDGGLNKPVEVRWKIASDAAMVHVVRTGQATAHPRLAHSVHVEVSGLQPGRPYWY
EECCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEE
QFESLGAQSAVGQACTAPLASAMVSARFGFVSCSHWEAGYFSAYRHLAAERPDLVFFLGD
EHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCEEEEECC
YIYEMNVSSESPRFPRHHATPDPMDLAGYRNRYAQYKTDPDLQALHACAPSVATWDDHEV
EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHH
QNDYAAQWSQDPDVPVDSFLRRRAAAYQAFYEHMPLRASSLPKGQEMRIYRNLDYGRLAR
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHEEE
FHVLDGRQYRSEQPCIQANGSRRGHVAPSDCPDLRDPKRTMLGWEQETWLDRSFAESPGQ
EEEECCHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC
WNVIAQDLLVAPLEQRDLKTQAQGHWTDGWDGYMTTRERVLASLQRHQTRNPVFWGGDIH
CHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCC
SFWTTDLHADAGNPDSAIVATEFVGTSVTSSGPPFDAFNSILGLNPHVKFFDSRQRGYVA
CCCCCCEECCCCCCCCEEEEEEHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEE
VDLNEQHMQTRFQVVSDVLDPAASLSTLKRFVVEAGKAGAVAV
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]