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The map label for this gene is cheD [H]

Identifier: 66044037

GI number: 66044037

Start: 888963

End: 889496

Strand: Reverse

Name: cheD [H]

Synonym: Psyr_0782

Alternate gene names: 66044037

Gene position: 889496-888963 (Counterclockwise)

Preceding gene: 66044038

Following gene: 66044036

Centisome position: 14.6

GC content: 58.24

Gene sequence:

>534_bases
ATGAACACGCCTGTCGGTGTAGCCGAAATAGTGCTGGGGCCTGGCGAAGTGGTCTTTCAGACCCGGCCGACTCGCCTGCG
CACGTTGCTGGGTTCATGCGTGGCGATTACCTTCTGGCACCCGTGGCGGCGTATTGGCGGCATGTGCCACTTCATGCTAC
CCGGGCGCATACGCCGGCATCAGCCACTGGACGGCAGGTACGCTGACGAAGCGATGGAAATACTCATTCGTCATGCACTG
GCCAATGGCACGCTGCCGGAGGAATATCAGGTCAAGCTGTTTGGCGGCGGCGAAATGTTTCCTGCTCATCGCCATGACCC
GCACATGCGTAACGTCGCTGACAGCAACGTTCACGCGGCGCTTGCACTGGCCGAACAGAACCGCCTGAAACTGATGGCTC
AGGACCTGGGCAGCACCGGCCATCGCAGCATCATCTTCGACCTGTGGGACGGAAACGTATGGGTCAGGCACCAACCAATG
GAAGCAATGGAAAAAGATGCCAAACAAAAAAATCAGCGTACTGCTGGTCGATGA

Upstream 100 bases:

>100_bases
GTCTCAAGCCAGGAGGCTATTTCATCATCAGCCACTCGGAAAGCCTGAACGGTGTGAATGACATGTTGAAAATGGTCTCC
CCTTCGATTTACCGCAAACC

Downstream 100 bases:

>100_bases
TTCGGCTGTAGTTCGTCAGGTACTGGTGGCCATTCTCAACGACACCCCCGATATTCATGTGATGGGCGCGGCGTCAGACC
CGATATTTGCCATGAGCAAG

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNTPVGVAEIVLGPGEVVFQTRPTRLRTLLGSCVAITFWHPWRRIGGMCHFMLPGRIRRHQPLDGRYADEAMEILIRHAL
ANGTLPEEYQVKLFGGGEMFPAHRHDPHMRNVADSNVHAALALAEQNRLKLMAQDLGSTGHRSIIFDLWDGNVWVRHQPM
EAMEKDAKQKNQRTAGR

Sequences:

>Translated_177_residues
MNTPVGVAEIVLGPGEVVFQTRPTRLRTLLGSCVAITFWHPWRRIGGMCHFMLPGRIRRHQPLDGRYADEAMEILIRHAL
ANGTLPEEYQVKLFGGGEMFPAHRHDPHMRNVADSNVHAALALAEQNRLKLMAQDLGSTGHRSIIFDLWDGNVWVRHQPM
EAMEKDAKQKNQRTAGR
>Mature_177_residues
MNTPVGVAEIVLGPGEVVFQTRPTRLRTLLGSCVAITFWHPWRRIGGMCHFMLPGRIRRHQPLDGRYADEAMEILIRHAL
ANGTLPEEYQVKLFGGGEMFPAHRHDPHMRNVADSNVHAALALAEQNRLKLMAQDLGSTGHRSIIFDLWDGNVWVRHQPM
EAMEKDAKQKNQRTAGR

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 20047; Mature: 20047

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPVGVAEIVLGPGEVVFQTRPTRLRTLLGSCVAITFWHPWRRIGGMCHFMLPGRIRRH
CCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHEEEECHHHHHCCEEEEECCCCCCCC
QPLDGRYADEAMEILIRHALANGTLPEEYQVKLFGGGEMFPAHRHDPHMRNVADSNVHAA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHEE
LALAEQNRLKLMAQDLGSTGHRSIIFDLWDGNVWVRHQPMEAMEKDAKQKNQRTAGR
EEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTPVGVAEIVLGPGEVVFQTRPTRLRTLLGSCVAITFWHPWRRIGGMCHFMLPGRIRRH
CCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHEEEECHHHHHCCEEEEECCCCCCCC
QPLDGRYADEAMEILIRHALANGTLPEEYQVKLFGGGEMFPAHRHDPHMRNVADSNVHAA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHEE
LALAEQNRLKLMAQDLGSTGHRSIIFDLWDGNVWVRHQPMEAMEKDAKQKNQRTAGR
EEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA