| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is purR [H]
Identifier: 66044032
GI number: 66044032
Start: 881642
End: 882655
Strand: Reverse
Name: purR [H]
Synonym: Psyr_0777
Alternate gene names: 66044032
Gene position: 882655-881642 (Counterclockwise)
Preceding gene: 66044036
Following gene: 66044031
Centisome position: 14.48
GC content: 63.51
Gene sequence:
>1014_bases ATGACCAGACCCGTAACGCTCAAGGATGTTGCCAACCATGCAGGTCTTTCCAAGGCTGCGGTGTCGCGCTATCTGAACCG AAGCATCAGCCTGCCGCCGGAAACCGCGCAACGTATCGACCTGGCGATCAAGGCGCTGGACTACCGGGGCAACAGTCTGG CCCGGCGCCTGAGCAAAGGCGGCAGTGAGACCATCGGCCTGGTGCTGCCGGACATCGCCAACCCGTTTTTCGCCGAGCTG GCAGACGCGGCCGAGGAAGAGGCGTCCGCACACGGTTATAACCTGGTGCTGTGTGTCACCCGCAACCTGCTTGAGCGCGA AAGCACGTTTGTGCGTTGGCTGGATTCACGTAACGTCGATGGCTTGCTACTGGTCAGCAACCGCCCGGATGACGGCACGC TGGCCAGCCAGCTGATGAGCTACCGCAATATCATTCTGCTCGACGAAGACGTTCCCGGCACGTCGCAGCCCAAAGTCTTC GCCGACAACCATCAGGGCGGTCGCCTGGCGACTGACTATCTGATCCGCCATGGCCATCGACGCATCGCTCATGTGTCCGG GCCGTCGGCCTTGATGAGTGCTCGCGAGCGCTATGCCGGCTACCGGGAAGCGCTCGCGCTGGCGAGCATCGCAGAGGTGC CGGAATACCTGTGCTTTGGGGATTACAGCCGTGAGTTCGGGCGTATCGCGACCGCACAGCTACTCACCCTGCCCGACCCT CCGGAGGCGATTTTCGCCGCCAGTGACTTCATCGCCCTGGGCGTGCTCGATGTCCTGCGTGAGCGCACTATCAGCGTGCC CGGTGCCATGTCGCTGGTGGGTTTCGACGACGCCGTCTACGCCAGCCTGCTGACCCCGCCGCTGTGTACCATCCGCCAAT CCTCCAGAGAGCTTGGCCGTCTCGGCGTGGCGCAACTGCTGCAGAGGATGACGGGCGGCGACTGTGCGCAGGACATCGTG CGCGTACCCGTAGAGCTGGTCTGTCGGGGCACGGTAGCAACGCGCAGTGACTGA
Upstream 100 bases:
>100_bases GTCACCCGCAGAGAAAATCGTCGGGCTGTTCGGGCACGCATGAGAAGATACCGGCACCTCACTTCAATACTTCGTTTTTC AGGCCACAAAGCCGACCGCC
Downstream 100 bases:
>100_bases TTGCGGGGCAACAAGTAACACCCGGCCTTAAATCAGTGCACTGCCGTTTGCCTCCTGAAAAGCCGATGATTGCGGAAAAC TGTGGCGCATCAAGGCTGTA
Product: LacI transcriptional regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTRPVTLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKGGSETIGLVLPDIANPFFAEL ADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVDGLLLVSNRPDDGTLASQLMSYRNIILLDEDVPGTSQPKVF ADNHQGGRLATDYLIRHGHRRIAHVSGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDP PEAIFAASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGRLGVAQLLQRMTGGDCAQDIV RVPVELVCRGTVATRSD
Sequences:
>Translated_337_residues MTRPVTLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKGGSETIGLVLPDIANPFFAEL ADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVDGLLLVSNRPDDGTLASQLMSYRNIILLDEDVPGTSQPKVF ADNHQGGRLATDYLIRHGHRRIAHVSGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDP PEAIFAASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGRLGVAQLLQRMTGGDCAQDIV RVPVELVCRGTVATRSD >Mature_336_residues TRPVTLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKGGSETIGLVLPDIANPFFAELA DAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVDGLLLVSNRPDDGTLASQLMSYRNIILLDEDVPGTSQPKVFA DNHQGGRLATDYLIRHGHRRIAHVSGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDPP EAIFAASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGRLGVAQLLQRMTGGDCAQDIVR VPVELVCRGTVATRSD
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790369, Length=332, Percent_Identity=34.0361445783133, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1790194, Length=330, Percent_Identity=34.8484848484849, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1787948, Length=332, Percent_Identity=32.8313253012048, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1788474, Length=334, Percent_Identity=31.1377245508982, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1789202, Length=287, Percent_Identity=31.7073170731707, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1787580, Length=321, Percent_Identity=28.9719626168224, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1786540, Length=332, Percent_Identity=32.2289156626506, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1789068, Length=316, Percent_Identity=30.0632911392405, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1789456, Length=335, Percent_Identity=29.5522388059701, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1790715, Length=323, Percent_Identity=26.3157894736842, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI48994940, Length=314, Percent_Identity=27.7070063694268, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1787906, Length=343, Percent_Identity=26.8221574344023, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790192, Length=278, Percent_Identity=29.8561151079137, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786268, Length=303, Percent_Identity=22.1122112211221, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1790689, Length=334, Percent_Identity=23.3532934131737, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36661; Mature: 36530
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVTLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKG CCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC GSETIGLVLPDIANPFFAELADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVD CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC GLLLVSNRPDDGTLASQLMSYRNIILLDEDVPGTSQPKVFADNHQGGRLATDYLIRHGHR EEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHCCCH RIAHVSGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDP HEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCC PEAIFAASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHH LGVAQLLQRMTGGDCAQDIVRVPVELVCRGTVATRSD HHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCC >Mature Secondary Structure TRPVTLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKG CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC GSETIGLVLPDIANPFFAELADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVD CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC GLLLVSNRPDDGTLASQLMSYRNIILLDEDVPGTSQPKVFADNHQGGRLATDYLIRHGHR EEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHCCCH RIAHVSGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDP HEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCC PEAIFAASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHH LGVAQLLQRMTGGDCAQDIVRVPVELVCRGTVATRSD HHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA