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The map label for this gene is ycjO [C]

Identifier: 66044016

GI number: 66044016

Start: 866593

End: 867555

Strand: Reverse

Name: ycjO [C]

Synonym: Psyr_0761

Alternate gene names: 66044016

Gene position: 867555-866593 (Counterclockwise)

Preceding gene: 66044017

Following gene: 66044015

Centisome position: 14.24

GC content: 60.64

Gene sequence:

>963_bases
ATGCCTGTCTCTTCTACCGACTACCCCGGAGACGACGAACTCGTCACCCGGGAAACGCCTGTACAACGTCGCAGGCTACG
CGCCGCCTGGCTGTTTCTGACGCCGATGCTGGTGTGCCTGGTGCTGGTGGCGGCCTGGCCATTGCTGCGCACATTCTGGT
TCAGCCTGACCGACGCCGATCTGTCGGATACCGGCAGTGGCTCATTCGTGGGCCTGAGCAATTATCTGCTCTACGACGGC
GTCATCTGGTCTGGCGTTCTGGTCGATCCGCAATGGTGGAACGCGGTGCGCAACACCCTGTATTTCACCGTGGTGTCGGT
CGGGCTGGAAATGGTCCTCGGACTGATGGTGGCGTTGCTGTTGAACGTCAAGTTCACCGGCCGCGCGCTGGTGCGTGCGT
TGATTCTGATCCCTTGGGCGATTCCGACCATCGTCTCGGCGAAAATCTGGTCGTGGATGCTCAACGACCAGTTCGGCATC
ATCAACCACATGATGCTGAGCCTGGGCCTGATTGACGCGCCACTGGCCTGGACGGCAGATGCGGATCTGTCGATGTGGGC
AGTGATCATTGTCGACGTCTGGAAGACCGTGCCCTTTGTCACCCTGCTGATGCTCGCGGCACTGCAGATGCTGCCAAGCG
ATTGCTACGAAGCCGCCAGGGTCGATGGCATTCATCCGGTGCGGGTGTTCTGGCGTGTGACGTTGCCGTTGCTGATGCCC
GCCTTGTTGGTCGCCGCGATCTTTCGCATCCTCGACTCGTTGCGGGTCTTCGACGTCATCTACGTCCTGACCTCCAACTC
TTCGAGCACCATGAGCATGTCGGTCTATGCCCGCCAGCACCTGGTGGAGTTCCAGGACGTCGGCTACGGCAGCGCCGCCT
CTACCCTGCTGTTTCTGGTCGTGGCCGTGATTGCCATGCTTTATCTGTACCTCGGACGCCGCCAGCTGGAGGTGCGCTCA
TGA

Upstream 100 bases:

>100_bases
GGCGGGCGATATACCGGTCGATCAGGCACTGGTCGAACTGGAACGCGAACTGACCCGCATCAAACGCCGGAACTGGTAAG
CCACACGTAAGGAAATCAAC

Downstream 100 bases:

>100_bases
ACCTGCGCTCACTGAAGAAAGCGCTGCTGCGCCTGGCCTTCTGGGGCCTGGTCGGGGTCGTGCTGCTGTACGCGATCTTC
CCTTTCTATTACGCCGTCCT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPVSSTDYPGDDELVTRETPVQRRRLRAAWLFLTPMLVCLVLVAAWPLLRTFWFSLTDADLSDTGSGSFVGLSNYLLYDG
VIWSGVLVDPQWWNAVRNTLYFTVVSVGLEMVLGLMVALLLNVKFTGRALVRALILIPWAIPTIVSAKIWSWMLNDQFGI
INHMMLSLGLIDAPLAWTADADLSMWAVIIVDVWKTVPFVTLLMLAALQMLPSDCYEAARVDGIHPVRVFWRVTLPLLMP
ALLVAAIFRILDSLRVFDVIYVLTSNSSSTMSMSVYARQHLVEFQDVGYGSAASTLLFLVVAVIAMLYLYLGRRQLEVRS

Sequences:

>Translated_320_residues
MPVSSTDYPGDDELVTRETPVQRRRLRAAWLFLTPMLVCLVLVAAWPLLRTFWFSLTDADLSDTGSGSFVGLSNYLLYDG
VIWSGVLVDPQWWNAVRNTLYFTVVSVGLEMVLGLMVALLLNVKFTGRALVRALILIPWAIPTIVSAKIWSWMLNDQFGI
INHMMLSLGLIDAPLAWTADADLSMWAVIIVDVWKTVPFVTLLMLAALQMLPSDCYEAARVDGIHPVRVFWRVTLPLLMP
ALLVAAIFRILDSLRVFDVIYVLTSNSSSTMSMSVYARQHLVEFQDVGYGSAASTLLFLVVAVIAMLYLYLGRRQLEVRS
>Mature_319_residues
PVSSTDYPGDDELVTRETPVQRRRLRAAWLFLTPMLVCLVLVAAWPLLRTFWFSLTDADLSDTGSGSFVGLSNYLLYDGV
IWSGVLVDPQWWNAVRNTLYFTVVSVGLEMVLGLMVALLLNVKFTGRALVRALILIPWAIPTIVSAKIWSWMLNDQFGII
NHMMLSLGLIDAPLAWTADADLSMWAVIIVDVWKTVPFVTLLMLAALQMLPSDCYEAARVDGIHPVRVFWRVTLPLLMPA
LLVAAIFRILDSLRVFDVIYVLTSNSSSTMSMSVYARQHLVEFQDVGYGSAASTLLFLVVAVIAMLYLYLGRRQLEVRS

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=265, Percent_Identity=29.811320754717, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1790465, Length=233, Percent_Identity=30.4721030042918, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789861, Length=311, Percent_Identity=26.0450160771704, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35853; Mature: 35722

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSSTDYPGDDELVTRETPVQRRRLRAAWLFLTPMLVCLVLVAAWPLLRTFWFSLTDAD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LSDTGSGSFVGLSNYLLYDGVIWSGVLVDPQWWNAVRNTLYFTVVSVGLEMVLGLMVALL
CCCCCCCCEEEHHHHHHHCCHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNVKFTGRALVRALILIPWAIPTIVSAKIWSWMLNDQFGIINHMMLSLGLIDAPLAWTAD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ADLSMWAVIIVDVWKTVPFVTLLMLAALQMLPSDCYEAARVDGIHPVRVFWRVTLPLLMP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALLVAAIFRILDSLRVFDVIYVLTSNSSSTMSMSVYARQHLVEFQDVGYGSAASTLLFLV
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VAVIAMLYLYLGRRQLEVRS
HHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure 
PVSSTDYPGDDELVTRETPVQRRRLRAAWLFLTPMLVCLVLVAAWPLLRTFWFSLTDAD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LSDTGSGSFVGLSNYLLYDGVIWSGVLVDPQWWNAVRNTLYFTVVSVGLEMVLGLMVALL
CCCCCCCCEEEHHHHHHHCCHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNVKFTGRALVRALILIPWAIPTIVSAKIWSWMLNDQFGIINHMMLSLGLIDAPLAWTAD
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ADLSMWAVIIVDVWKTVPFVTLLMLAALQMLPSDCYEAARVDGIHPVRVFWRVTLPLLMP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALLVAAIFRILDSLRVFDVIYVLTSNSSSTMSMSVYARQHLVEFQDVGYGSAASTLLFLV
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VAVIAMLYLYLGRRQLEVRS
HHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]