| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yfcX [C]
Identifier: 66044001
GI number: 66044001
Start: 845696
End: 846529
Strand: Reverse
Name: yfcX [C]
Synonym: Psyr_0742
Alternate gene names: 66044001
Gene position: 846529-845696 (Counterclockwise)
Preceding gene: 66044002
Following gene: 66044000
Centisome position: 13.89
GC content: 57.07
Gene sequence:
>834_bases ATGAGATCTCTACTGACCCAGTTCACGATCACCGATGTAGCGCCGGGATACTGGCGAGTGACTTTCAACAATCCGCCCCT CAACTTTTGCGATCCGGACACCCTCATCGAGTTGCAGCAGATCGCCACTCTTATCGAATCCGATGACGCGTTGCGGGTGG TCGTATTCGATAGCGATGACCAGGATTTTTTTGTCAATCACTATGATGTATCCCGGGTCGCCGATTTTCCCCTGCAGCCT GGACCTACTGGACTGCCAACGTTCATCGATGCCACCACACGGTTGACCACCTCACCTGTTGTGACCATCGCCTCAATTCG GGGTCGCACGCGTGGCGGGGGTTCTGAGATTGCTCTGGCATGTGATATGCGATTTGCAAGCCTTGAGCGTGCGATCTTTG CCCAGATCGAGGTCGGAGCAGGCGTGTTCCCAGGCGGTGGCGCAACGGAGCGACTACCACTCCTCGTCGGGCGGGCAAGG GCACTCGAAATCGTCCTAGGCAGTGATGATTTCGACGCAGCCACTGCAGCGCTTTACGGGTGGGTGAACCGCGCCCTCCC CGATAATGAACTCGACGCATTTGTCGACAATCTCGCTCGACGCATCGCGTCGTTCGACAAGCCTGCGCTGGCCGAGGCCA AAGGGCTGATTAACCGCAGAACCCTGCCATCCGCTGAGGATCTTATGCAAACACAGGAAGTTTTCCTTAATGCGTTCTCT TGGCCGACGGTTCATGAGCGGGGAGCCCGCATAGCGCAAAAGCGCGACGAAGTGGGGGCTGACTTCGAGGCCCGGATGGG CTATCACCTCGGCAATCTCAGAACCAATACCTAA
Upstream 100 bases:
>100_bases CTGACATCCTGATTACGGTCGTCATCCTGATGCTATACAGCGAGAGATGCCTGCATTCTCGATACGTCCAATACTCAGCA TCCTATAAGGAATATCCTGA
Downstream 100 bases:
>100_bases CAGCACGAATAGCAATCGTCTTTGGTGCGTCCGAAGCCTTGGCGTACTTCGAATGAACTGGGTCGCACTCACACTCTTTG GGATAAACTGGTATCCCATT
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MRSLLTQFTITDVAPGYWRVTFNNPPLNFCDPDTLIELQQIATLIESDDALRVVVFDSDDQDFFVNHYDVSRVADFPLQP GPTGLPTFIDATTRLTTSPVVTIASIRGRTRGGGSEIALACDMRFASLERAIFAQIEVGAGVFPGGGATERLPLLVGRAR ALEIVLGSDDFDAATAALYGWVNRALPDNELDAFVDNLARRIASFDKPALAEAKGLINRRTLPSAEDLMQTQEVFLNAFS WPTVHERGARIAQKRDEVGADFEARMGYHLGNLRTNT
Sequences:
>Translated_277_residues MRSLLTQFTITDVAPGYWRVTFNNPPLNFCDPDTLIELQQIATLIESDDALRVVVFDSDDQDFFVNHYDVSRVADFPLQP GPTGLPTFIDATTRLTTSPVVTIASIRGRTRGGGSEIALACDMRFASLERAIFAQIEVGAGVFPGGGATERLPLLVGRAR ALEIVLGSDDFDAATAALYGWVNRALPDNELDAFVDNLARRIASFDKPALAEAKGLINRRTLPSAEDLMQTQEVFLNAFS WPTVHERGARIAQKRDEVGADFEARMGYHLGNLRTNT >Mature_277_residues MRSLLTQFTITDVAPGYWRVTFNNPPLNFCDPDTLIELQQIATLIESDDALRVVVFDSDDQDFFVNHYDVSRVADFPLQP GPTGLPTFIDATTRLTTSPVVTIASIRGRTRGGGSEIALACDMRFASLERAIFAQIEVGAGVFPGGGATERLPLLVGRAR ALEIVLGSDDFDAATAALYGWVNRALPDNELDAFVDNLARRIASFDKPALAEAKGLINRRTLPSAEDLMQTQEVFLNAFS WPTVHERGARIAQKRDEVGADFEARMGYHLGNLRTNT
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=201, Percent_Identity=32.8358208955224, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI20127408, Length=241, Percent_Identity=26.5560165975104, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1788682, Length=174, Percent_Identity=28.735632183908, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787659, Length=220, Percent_Identity=28.1818181818182, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788597, Length=206, Percent_Identity=25.7281553398058, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI221142681, Length=247, Percent_Identity=27.1255060728745, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25145438, Length=244, Percent_Identity=29.9180327868852, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17540714, Length=182, Percent_Identity=29.6703296703297, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17554946, Length=239, Percent_Identity=24.6861924686192, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI20129971, Length=200, Percent_Identity=25, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24653477, Length=200, Percent_Identity=25, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 30391; Mature: 30391
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLLTQFTITDVAPGYWRVTFNNPPLNFCDPDTLIELQQIATLIESDDALRVVVFDSDD CCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC QDFFVNHYDVSRVADFPLQPGPTGLPTFIDATTRLTTSPVVTIASIRGRTRGGGSEIALA CCEEEEECCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEE CDMRFASLERAIFAQIEVGAGVFPGGGATERLPLLVGRARALEIVLGSDDFDAATAALYG ECCHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHH WVNRALPDNELDAFVDNLARRIASFDKPALAEAKGLINRRTLPSAEDLMQTQEVFLNAFS HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC WPTVHERGARIAQKRDEVGADFEARMGYHLGNLRTNT CCCHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCC >Mature Secondary Structure MRSLLTQFTITDVAPGYWRVTFNNPPLNFCDPDTLIELQQIATLIESDDALRVVVFDSDD CCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC QDFFVNHYDVSRVADFPLQPGPTGLPTFIDATTRLTTSPVVTIASIRGRTRGGGSEIALA CCEEEEECCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEE CDMRFASLERAIFAQIEVGAGVFPGGGATERLPLLVGRARALEIVLGSDDFDAATAALYG ECCHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHH WVNRALPDNELDAFVDNLARRIASFDKPALAEAKGLINRRTLPSAEDLMQTQEVFLNAFS HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC WPTVHERGARIAQKRDEVGADFEARMGYHLGNLRTNT CCCHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA