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The map label for this gene is med [H]

Identifier: 66043930

GI number: 66043930

Start: 751440

End: 752534

Strand: Reverse

Name: med [H]

Synonym: Psyr_0663

Alternate gene names: 66043930

Gene position: 752534-751440 (Counterclockwise)

Preceding gene: 66043931

Following gene: 66043929

Centisome position: 12.35

GC content: 60.46

Gene sequence:

>1095_bases
ATGCACCTGACCAACCCACGTCGTCCCCTGAAAAAACTGCTGTGCGCCGTCGCCGCCGTTGTCGGCATCGGCTCCAGCCT
GCTCGCCTCGGCAGCCGATCCGCTGAAAGTCGGCTTCGTCTACATCGGCCCCATCGGCGACCACGGCTGGACCTATCAGC
ACGAGCAGGGGCGCCAGGCGATGGTCAAGGCGCTGGGTGACAAGGTCACCAGCAGCTACGTGGAAAACGTGCCGGAAGGT
GCAGACGCCGAGCGGGTCATCCGCAACATGGCCAAGGGCGGTTACGACCTGATCTTCAGTACCTCGTTCGGTTACATGAA
CCCCACCCTGAAAGTCGCCAAGCAGTTCCCCAAGGTGAAGTTCGAGCACGCGACCGGCTACAAGCAGGACAAGAACATGG
GCACTTACCTGGCCCGCACCTATGAAGGTCGCTACGTGAGCGGTTACATCGCCGCGAAGATGACCAAGACCAAGAAGATC
GGTTATGTCGCCTCGTTCCCGATTCCTGAAGTACTGCGCGACATCGACGCCATCCAGCTGGCGCTGAACAAATACAATCC
GGGCACCGAGATCAAGGTGGTGTGGGTCAACTCCTGGTTCGATCCGGGCAAAGAAGCCGATGCGGCCAACGCGTTGATCG
ATCAGGGCGTGGACGTGGTATTCCAGCACACTGATAGTCCTGCGCCGATCCAGACCGCCGAGCGTCGTGGCGTGTATGCC
GTCGGTTATGCCTCGGACATGGCTCACTTCGGACCAAAAGCAGTGCTGACCTCCATCGTCAACAACTGGGGCCCGCACTA
CATTCAGGCCGCCGAAGGCGCCATCGCGGGCACCTGGAAACCACAGGATTACTGGGGCGGCCTGAAGGAAGGAACGGTCG
AATTGCCGATCAGCGACGTGGTGCCTGCTGACGTGAAGGCCGAGGCGCAGAAGATAATCGCCAGCATCGAAAGCGGCGAA
TTCCACCCGTTCACCGGCCCGATCAAGGACCAGAACGGCACGGTGAAAATTGCTGACGGCGTGGTCGCGACCAACGCCGA
GCTGGCGTCGATGAACTACTACGTCGAAGGCATCAAGGCCGAGCTGCCGAAGTAA

Upstream 100 bases:

>100_bases
CTACAGGGTGAAGCAAGCCAGCATCGTAAGTTGTCCTGTTGGTCAGTTAATTGCATTGCTCGGGTAGGCATTCCAACAAG
ACCGCAAGGAGCTAGACCCG

Downstream 100 bases:

>100_bases
TCAGCCCGTCAGCTGCCTGACCATCGTGCCTGCCGCGCCAGGCACGATCATCGACACTTCCCTTTCAGGACCGGTTAATG
GACCAGCTTCCCGTCATCGA

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MHLTNPRRPLKKLLCAVAAVVGIGSSLLASAADPLKVGFVYIGPIGDHGWTYQHEQGRQAMVKALGDKVTSSYVENVPEG
ADAERVIRNMAKGGYDLIFSTSFGYMNPTLKVAKQFPKVKFEHATGYKQDKNMGTYLARTYEGRYVSGYIAAKMTKTKKI
GYVASFPIPEVLRDIDAIQLALNKYNPGTEIKVVWVNSWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQTAERRGVYA
VGYASDMAHFGPKAVLTSIVNNWGPHYIQAAEGAIAGTWKPQDYWGGLKEGTVELPISDVVPADVKAEAQKIIASIESGE
FHPFTGPIKDQNGTVKIADGVVATNAELASMNYYVEGIKAELPK

Sequences:

>Translated_364_residues
MHLTNPRRPLKKLLCAVAAVVGIGSSLLASAADPLKVGFVYIGPIGDHGWTYQHEQGRQAMVKALGDKVTSSYVENVPEG
ADAERVIRNMAKGGYDLIFSTSFGYMNPTLKVAKQFPKVKFEHATGYKQDKNMGTYLARTYEGRYVSGYIAAKMTKTKKI
GYVASFPIPEVLRDIDAIQLALNKYNPGTEIKVVWVNSWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQTAERRGVYA
VGYASDMAHFGPKAVLTSIVNNWGPHYIQAAEGAIAGTWKPQDYWGGLKEGTVELPISDVVPADVKAEAQKIIASIESGE
FHPFTGPIKDQNGTVKIADGVVATNAELASMNYYVEGIKAELPK
>Mature_364_residues
MHLTNPRRPLKKLLCAVAAVVGIGSSLLASAADPLKVGFVYIGPIGDHGWTYQHEQGRQAMVKALGDKVTSSYVENVPEG
ADAERVIRNMAKGGYDLIFSTSFGYMNPTLKVAKQFPKVKFEHATGYKQDKNMGTYLARTYEGRYVSGYIAAKMTKTKKI
GYVASFPIPEVLRDIDAIQLALNKYNPGTEIKVVWVNSWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQTAERRGVYA
VGYASDMAHFGPKAVLTSIVNNWGPHYIQAAEGAIAGTWKPQDYWGGLKEGTVELPISDVVPADVKAEAQKIIASIESGE
FHPFTGPIKDQNGTVKIADGVVATNAELASMNYYVEGIKAELPK

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 39498; Mature: 39498

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLTNPRRPLKKLLCAVAAVVGIGSSLLASAADPLKVGFVYIGPIGDHGWTYQHEQGRQA
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHH
MVKALGDKVTSSYVENVPEGADAERVIRNMAKGGYDLIFSTSFGYMNPTLKVAKQFPKVK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEE
FEHATGYKQDKNMGTYLARTYEGRYVSGYIAAKMTKTKKIGYVASFPIPEVLRDIDAIQL
EECCCCCCCCCCCHHHHHEEECCCEEEEEEEEHHHHHHHCCEEECCCHHHHHHHHHHHHH
ALNKYNPGTEIKVVWVNSWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQTAERRGVYA
HHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCEEE
VGYASDMAHFGPKAVLTSIVNNWGPHYIQAAEGAIAGTWKPQDYWGGLKEGTVELPISDV
EECHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHHCCCCCCCEEECCHHHC
VPADVKAEAQKIIASIESGEFHPFTGPIKDQNGTVKIADGVVATNAELASMNYYVEGIKA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEECCCHHHHHHHHEEHHHH
ELPK
CCCC
>Mature Secondary Structure
MHLTNPRRPLKKLLCAVAAVVGIGSSLLASAADPLKVGFVYIGPIGDHGWTYQHEQGRQA
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHH
MVKALGDKVTSSYVENVPEGADAERVIRNMAKGGYDLIFSTSFGYMNPTLKVAKQFPKVK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEE
FEHATGYKQDKNMGTYLARTYEGRYVSGYIAAKMTKTKKIGYVASFPIPEVLRDIDAIQL
EECCCCCCCCCCCHHHHHEEECCCEEEEEEEEHHHHHHHCCEEECCCHHHHHHHHHHHHH
ALNKYNPGTEIKVVWVNSWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQTAERRGVYA
HHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCEEE
VGYASDMAHFGPKAVLTSIVNNWGPHYIQAAEGAIAGTWKPQDYWGGLKEGTVELPISDV
EECHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHHCCCCCCCEEECCHHHC
VPADVKAEAQKIIASIESGEFHPFTGPIKDQNGTVKIADGVVATNAELASMNYYVEGIKA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEECCCHHHHHHHHEEHHHH
ELPK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]