| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is add [H]
Identifier: 66043928
GI number: 66043928
Start: 749365
End: 750318
Strand: Reverse
Name: add [H]
Synonym: Psyr_0661
Alternate gene names: 66043928
Gene position: 750318-749365 (Counterclockwise)
Preceding gene: 66043929
Following gene: 66043925
Centisome position: 12.31
GC content: 61.43
Gene sequence:
>954_bases ATGTACGACTGGTTGAACGCCCTGCCCAAGGCAGAACTGCACTTGCACCTCGAAGGCTCGCTGGAACCCGAGTTGCTGTT CGCCCTGGCCGAGCGCAACAGGATTGCCCTGCCGTGGGATGACGTCGAAACCCTGCGCAAGGCATATGCCTTCAACAACC TGCAGGAATTCCTCGACCTGTATTACCGGGGCGCGGACGTATTGCGCACCGAGCAGGACTTCTACGACCTGACCTGGGCC TACCTGCTGCGCTGCAAGGCACAGAACGTTGTCCACACCGAACCGTTCTTCGATCCGCAAACCCACACCGACCGTGGCAT CCCGTTCGAAGTGGTACTGGCCGGGATTACCGGTGCGCTGAAAGACGGCAAGTCGAAGCTGGGCGTCGACAGCGGCCTGA TCCTGAGCTTCCTGCGTCACCTGTCCCAGGAAGAGGCCGAAAAAACCCTCGATCAGGCGCTGCCGTTCCGTGATGCGTTC GTCGCCGTGGGCCTCGACAGCTCGGAAATGGGTCACCCGCCAAGCAAGTTCCAGCGTGTGTTCGATCGCGCGCGCAACGA GGGCTTCCTGACCGTGGCCCACGCCGGAGAAGAAGGTCCGCCGGAATACATCTGGGAAGCACTGGACCTGCTGAAGATCC AGCGCATCGACCACGGTGTGCGCGCCATCGAAGACGAGCGGCTGATGCAGCGCATCATCGACGAACAGATCCCGCTGACC GTCTGCCCGCTGTCCAACACCAAGCTTTGCGTGTTCGACGACATGGCCCAGCACAACATCCTCGACATGCTCGAGCGCGG CGTGAAGGTCACCGTCAATTCGGACGACCCGGCCTACTTCGGTGGCTACGTGACCGAGAACTTCCACGCGCTGTACACCC ACCTGGGCATGACCGAAGATCAGGCCAAACGCCTGGCGCAAAACAGCCTGGATGCACGACTGGTCAAGCCCTAG
Upstream 100 bases:
>100_bases CCGCGAACAGGAGGCAAGTTGAACGTTCGGTCAGGTTTTACCCTGCGCAGCGACGTGCATCTGTAGAATGCCCGGGATCT GCACCTGATGAGAAAAGAAT
Downstream 100 bases:
>100_bases AGAGTGATTGAGCGGCTACCCCCATCGTTCCTCACGCTCCGCGTGGCAATGCCTTTCGCGACGCTCTGCGTCGCAAGAGG ACGCGGAGCGTCCGGAACTG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MYDWLNALPKAELHLHLEGSLEPELLFALAERNRIALPWDDVETLRKAYAFNNLQEFLDLYYRGADVLRTEQDFYDLTWA YLLRCKAQNVVHTEPFFDPQTHTDRGIPFEVVLAGITGALKDGKSKLGVDSGLILSFLRHLSQEEAEKTLDQALPFRDAF VAVGLDSSEMGHPPSKFQRVFDRARNEGFLTVAHAGEEGPPEYIWEALDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT VCPLSNTKLCVFDDMAQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALYTHLGMTEDQAKRLAQNSLDARLVKP
Sequences:
>Translated_317_residues MYDWLNALPKAELHLHLEGSLEPELLFALAERNRIALPWDDVETLRKAYAFNNLQEFLDLYYRGADVLRTEQDFYDLTWA YLLRCKAQNVVHTEPFFDPQTHTDRGIPFEVVLAGITGALKDGKSKLGVDSGLILSFLRHLSQEEAEKTLDQALPFRDAF VAVGLDSSEMGHPPSKFQRVFDRARNEGFLTVAHAGEEGPPEYIWEALDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT VCPLSNTKLCVFDDMAQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALYTHLGMTEDQAKRLAQNSLDARLVKP >Mature_317_residues MYDWLNALPKAELHLHLEGSLEPELLFALAERNRIALPWDDVETLRKAYAFNNLQEFLDLYYRGADVLRTEQDFYDLTWA YLLRCKAQNVVHTEPFFDPQTHTDRGIPFEVVLAGITGALKDGKSKLGVDSGLILSFLRHLSQEEAEKTLDQALPFRDAF VAVGLDSSEMGHPPSKFQRVFDRARNEGFLTVAHAGEEGPPEYIWEALDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT VCPLSNTKLCVFDDMAQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALYTHLGMTEDQAKRLAQNSLDARLVKP
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=329, Percent_Identity=25.2279635258359, Blast_Score=107, Evalue=1e-23, Organism=Escherichia coli, GI1787910, Length=311, Percent_Identity=27.9742765273312, Blast_Score=139, Evalue=2e-34, Organism=Caenorhabditis elegans, GI32565969, Length=318, Percent_Identity=26.1006289308176, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538512, Length=318, Percent_Identity=26.1006289308176, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324188, Length=294, Percent_Identity=47.2789115646259, Blast_Score=265, Evalue=6e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36114; Mature: 36114
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDWLNALPKAELHLHLEGSLEPELLFALAERNRIALPWDDVETLRKAYAFNNLQEFLDL CCCHHHHCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHH YYRGADVLRTEQDFYDLTWAYLLRCKAQNVVHTEPFFDPQTHTDRGIPFEVVLAGITGAL HHCCCHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHH KDGKSKLGVDSGLILSFLRHLSQEEAEKTLDQALPFRDAFVAVGLDSSEMGHPPSKFQRV HCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCHHHHHHH FDRARNEGFLTVAHAGEEGPPEYIWEALDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VCPLSNTKLCVFDDMAQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALYTHLGMTED EECCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCCCEECCHHHHHHHHHHHHCCCCHH QAKRLAQNSLDARLVKP HHHHHHHHCCCCEECCC >Mature Secondary Structure MYDWLNALPKAELHLHLEGSLEPELLFALAERNRIALPWDDVETLRKAYAFNNLQEFLDL CCCHHHHCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHH YYRGADVLRTEQDFYDLTWAYLLRCKAQNVVHTEPFFDPQTHTDRGIPFEVVLAGITGAL HHCCCHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHH KDGKSKLGVDSGLILSFLRHLSQEEAEKTLDQALPFRDAFVAVGLDSSEMGHPPSKFQRV HCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCHHHHHHH FDRARNEGFLTVAHAGEEGPPEYIWEALDLLKIQRIDHGVRAIEDERLMQRIIDEQIPLT HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VCPLSNTKLCVFDDMAQHNILDMLERGVKVTVNSDDPAYFGGYVTENFHALYTHLGMTED EECCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCCCEECCHHHHHHHHHHHHCCCCHH QAKRLAQNSLDARLVKP HHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA