Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is 66043907

Identifier: 66043907

GI number: 66043907

Start: 728622

End: 729260

Strand: Reverse

Name: 66043907

Synonym: Psyr_0640

Alternate gene names: NA

Gene position: 729260-728622 (Counterclockwise)

Preceding gene: 66043908

Following gene: 66043906

Centisome position: 11.97

GC content: 65.73

Gene sequence:

>639_bases
ATGAAACACCGTTCTGCCTTATTTGCCGTGCTGCTGGGAACCGCTCTGCTCGGGATCAGCGCCTGCCAGAGCGACAATCC
GTATGTCGCCAGCTCTCTGCCCATGCCTCCCGCCCCCGCGCAGGCGGCAAGAACGCTGGACATGAGCGCCTACCCTGCGC
CCCCGCGTGACTATGGGCGTTATCGCTCCTGGGGCTGGCTCAACGGTCAGTTGCCGCCCGGTACCGCATGGGTGGATTCG
GCGCAGGTGGTCGAAGCCGTGAGCAACGGCCTGGACCAGCGTGGCTTGCGACCGGCTCGCGGCAATCAACCGGCAGACCT
GTACGTCGCTGCCACGACCCGGCAGGAAACCCGGCTGCGCCAGGTGCGTGAAGATTACGATCCCTACTATGGGGGCGGCA
TGGGCTATGGCCGCTACGATGGCTACCGGCCCGGTTATGGCGGCTACGCCAGTGTGCCGGTGGTGCGCACCTATCAGGAA
AAGGTCATGGTGGTGCAGATCAACCTGATCGACGCGCGCAGCGGCCAGCCGGTATGGAGCGCCAGTGCCGATGCGCGCGC
CAGCAACAATCTGGCCGACCGCAGCAGTGCATTGCGGCAGGCCGTGCAACAGGCTCTGGCGGCCTACCCGCCTTCGTAA

Upstream 100 bases:

>100_bases
GAAATGGAACTGGCGCATCGGCGTCATCCAGCCTTTGCCGGGCTGGGTCGATACCTTCACTGGATGTGCCGTCCGGTCTG
ACATCACTGCGGAGCCCACC

Downstream 100 bases:

>100_bases
CCCTTTCGGAGAACTGCCATGCTTCGCCGTATCGTTCTGCTGACCTGTGCCGTGTTGCTGACGGCCTGTCAGAGCAACTC
GATCAATCGCGACTTCGATG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKHRSALFAVLLGTALLGISACQSDNPYVASSLPMPPAPAQAARTLDMSAYPAPPRDYGRYRSWGWLNGQLPPGTAWVDS
AQVVEAVSNGLDQRGLRPARGNQPADLYVAATTRQETRLRQVREDYDPYYGGGMGYGRYDGYRPGYGGYASVPVVRTYQE
KVMVVQINLIDARSGQPVWSASADARASNNLADRSSALRQAVQQALAAYPPS

Sequences:

>Translated_212_residues
MKHRSALFAVLLGTALLGISACQSDNPYVASSLPMPPAPAQAARTLDMSAYPAPPRDYGRYRSWGWLNGQLPPGTAWVDS
AQVVEAVSNGLDQRGLRPARGNQPADLYVAATTRQETRLRQVREDYDPYYGGGMGYGRYDGYRPGYGGYASVPVVRTYQE
KVMVVQINLIDARSGQPVWSASADARASNNLADRSSALRQAVQQALAAYPPS
>Mature_212_residues
MKHRSALFAVLLGTALLGISACQSDNPYVASSLPMPPAPAQAARTLDMSAYPAPPRDYGRYRSWGWLNGQLPPGTAWVDS
AQVVEAVSNGLDQRGLRPARGNQPADLYVAATTRQETRLRQVREDYDPYYGGGMGYGRYDGYRPGYGGYASVPVVRTYQE
KVMVVQINLIDARSGQPVWSASADARASNNLADRSSALRQAVQQALAAYPPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22970; Mature: 22970

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHRSALFAVLLGTALLGISACQSDNPYVASSLPMPPAPAQAARTLDMSAYPAPPRDYGR
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHC
YRSWGWLNGQLPPGTAWVDSAQVVEAVSNGLDQRGLRPARGNQPADLYVAATTRQETRLR
CCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEECCHHHHHHH
QVREDYDPYYGGGMGYGRYDGYRPGYGGYASVPVVRTYQEKVMVVQINLIDARSGQPVWS
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEECCCCCCCCC
ASADARASNNLADRSSALRQAVQQALAAYPPS
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKHRSALFAVLLGTALLGISACQSDNPYVASSLPMPPAPAQAARTLDMSAYPAPPRDYGR
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHC
YRSWGWLNGQLPPGTAWVDSAQVVEAVSNGLDQRGLRPARGNQPADLYVAATTRQETRLR
CCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEECCHHHHHHH
QVREDYDPYYGGGMGYGRYDGYRPGYGGYASVPVVRTYQEKVMVVQINLIDARSGQPVWS
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEECCCCCCCCC
ASADARASNNLADRSSALRQAVQQALAAYPPS
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA