Click here to switch to the map view.

The map label for this gene is yjeS [H]

Identifier: 66043833

GI number: 66043833

Start: 643077

End: 644165

Strand: Reverse

Name: yjeS [H]

Synonym: Psyr_0566

Alternate gene names: 66043833

Gene position: 644165-643077 (Counterclockwise)

Preceding gene: 66043853

Following gene: 66043830

Centisome position: 10.57

GC content: 62.17

Gene sequence:

>1089_bases
ATGTCCGCTATTACTGCTGTACTTCCCACTTCCGATGATCTTGCCGCCCTTGCCGTTTCAATCAAGGCGTGGGGGCGTGA
GCTGGGCTTTCAGGAAGTCGGGATCAGCGGCCTGGACCTGGCAGAGCACGAACAGCATCTGCAACGCTGGCTCGATGCAG
GCTATCACGGGGAAATGGACTATATGGCAGCCCATGGCAGCAAACGTTCCCACCCCGATGAGCTGGTGCCGGGAACGCTG
CGCGTGGTGTCGCTGCGCATGGACTATCTGCCGGGCGACACCGAGATGGCGCAGCGCCTGACCGAGCCGGAAAAAGCCTA
CGTCTCACGCTACGCGCTGGGCCGTGATTATCACAAACTCATCCGCAAGCGCCTGCAGCAACTGGCCGAGCGTATTCAGC
AGGCCATCGGGCCGTTTGGCTTTCGAGCCTTCGTGGACAGCGCGCCAGTGCTGGAAAAGGCCATCGCCGAACAGGCCGGG
CTGGGCTGGATCGGCAAGAACACGCTGGTGCTCAACCGCAAGGCGGGCAGCTTCTTCTTTCTTGGCGAGCTGTTTGTCGA
TATTCCGCTGCCGGTGGATGCGCCCCATGCGACCGAACACTGCGGTCGTTGTACAGCCTGCCTGGACATCTGCCCGACTG
CGGCGTTTGTCGGGCCTTATGTGCTGGATGCGCGGCGTTGTATTTCCTACCTGACCATCGAGCTGAAGACGGCGATTCCC
GAAGAGCTGCGGCCGTTGATTGGTAACCGGGTGTTCGGCTGTGACGATTGCCAGATCGTCTGCCCGTGGAACCGCTTCGC
CCGGCCAACCGAGCAGAGCGACTTTCAGCCGCGTCACAATCTGGACAATGCCGGGCTGGCCGAGCTGTTCCTCTGGGATG
AAGAGAAATTCCTCGGCAGCACCGAAGGCTCGCCACTGCGCCGGGCGGGTTATGAGCGCTGGCTACGCAACCTGGCCGTG
GGGCTGGGCAACGCGCCCTCCACCATCCCGGTGATCGAGGCCCTGCAAGCACGGCGCGACTACCCGTCGGAACTGGTCAG
AGAACATGTGGAATGGGCGCTGCAGAGACATGGCGTGGCGCCGCTTTAA

Upstream 100 bases:

>100_bases
ACAGCGCGTCGGGTAAATGAGGTTTAGTGTCGAACATGCGTCTATGGGCTCCGATGTCTGGCAGAATTATACGCACCTTG
GCCCCGGTTTCTCTCTGCGC

Downstream 100 bases:

>100_bases
AGGTACCCCCTGGATATTCCTGTGGGAGCTTGCTCGCGAAGGCGTAGTCACGATATATAGATTTTCAGCGACTGCACCGG
CCTCTTCGTGAGCAAGCTCA

Product: 4Fe-4S cluster binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSAITAVLPTSDDLAALAVSIKAWGRELGFQEVGISGLDLAEHEQHLQRWLDAGYHGEMDYMAAHGSKRSHPDELVPGTL
RVVSLRMDYLPGDTEMAQRLTEPEKAYVSRYALGRDYHKLIRKRLQQLAERIQQAIGPFGFRAFVDSAPVLEKAIAEQAG
LGWIGKNTLVLNRKAGSFFFLGELFVDIPLPVDAPHATEHCGRCTACLDICPTAAFVGPYVLDARRCISYLTIELKTAIP
EELRPLIGNRVFGCDDCQIVCPWNRFARPTEQSDFQPRHNLDNAGLAELFLWDEEKFLGSTEGSPLRRAGYERWLRNLAV
GLGNAPSTIPVIEALQARRDYPSELVREHVEWALQRHGVAPL

Sequences:

>Translated_362_residues
MSAITAVLPTSDDLAALAVSIKAWGRELGFQEVGISGLDLAEHEQHLQRWLDAGYHGEMDYMAAHGSKRSHPDELVPGTL
RVVSLRMDYLPGDTEMAQRLTEPEKAYVSRYALGRDYHKLIRKRLQQLAERIQQAIGPFGFRAFVDSAPVLEKAIAEQAG
LGWIGKNTLVLNRKAGSFFFLGELFVDIPLPVDAPHATEHCGRCTACLDICPTAAFVGPYVLDARRCISYLTIELKTAIP
EELRPLIGNRVFGCDDCQIVCPWNRFARPTEQSDFQPRHNLDNAGLAELFLWDEEKFLGSTEGSPLRRAGYERWLRNLAV
GLGNAPSTIPVIEALQARRDYPSELVREHVEWALQRHGVAPL
>Mature_361_residues
SAITAVLPTSDDLAALAVSIKAWGRELGFQEVGISGLDLAEHEQHLQRWLDAGYHGEMDYMAAHGSKRSHPDELVPGTLR
VVSLRMDYLPGDTEMAQRLTEPEKAYVSRYALGRDYHKLIRKRLQQLAERIQQAIGPFGFRAFVDSAPVLEKAIAEQAGL
GWIGKNTLVLNRKAGSFFFLGELFVDIPLPVDAPHATEHCGRCTACLDICPTAAFVGPYVLDARRCISYLTIELKTAIPE
ELRPLIGNRVFGCDDCQIVCPWNRFARPTEQSDFQPRHNLDNAGLAELFLWDEEKFLGSTEGSPLRRAGYERWLRNLAVG
LGNAPSTIPVIEALQARRDYPSELVREHVEWALQRHGVAPL

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=346, Percent_Identity=61.271676300578, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 40425; Mature: 40293

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAITAVLPTSDDLAALAVSIKAWGRELGFQEVGISGLDLAEHEQHLQRWLDAGYHGEMD
CCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCH
YMAAHGSKRSHPDELVPGTLRVVSLRMDYLPGDTEMAQRLTEPEKAYVSRYALGRDYHKL
HHHHCCCCCCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCHHHHHH
IRKRLQQLAERIQQAIGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSFFF
HHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEECCCEEEEEECCCCEEE
LGELFVDIPLPVDAPHATEHCGRCTACLDICPTAAFVGPYVLDARRCISYLTIELKTAIP
EEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EELRPLIGNRVFGCDDCQIVCPWNRFARPTEQSDFQPRHNLDNAGLAELFLWDEEKFLGS
HHHHHHHCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCHHHCCC
TEGSPLRRAGYERWLRNLAVGLGNAPSTIPVIEALQARRDYPSELVREHVEWALQRHGVA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PL
CC
>Mature Secondary Structure 
SAITAVLPTSDDLAALAVSIKAWGRELGFQEVGISGLDLAEHEQHLQRWLDAGYHGEMD
CCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCH
YMAAHGSKRSHPDELVPGTLRVVSLRMDYLPGDTEMAQRLTEPEKAYVSRYALGRDYHKL
HHHHCCCCCCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCHHHHHH
IRKRLQQLAERIQQAIGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSFFF
HHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEECCCEEEEEECCCCEEE
LGELFVDIPLPVDAPHATEHCGRCTACLDICPTAAFVGPYVLDARRCISYLTIELKTAIP
EEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EELRPLIGNRVFGCDDCQIVCPWNRFARPTEQSDFQPRHNLDNAGLAELFLWDEEKFLGS
HHHHHHHCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCHHHHEEECCHHHCCC
TEGSPLRRAGYERWLRNLAVGLGNAPSTIPVIEALQARRDYPSELVREHVEWALQRHGVA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]