| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043827
Identifier: 66043827
GI number: 66043827
Start: 636247
End: 637782
Strand: Reverse
Name: 66043827
Synonym: Psyr_0560
Alternate gene names: NA
Gene position: 637782-636247 (Counterclockwise)
Preceding gene: 66043830
Following gene: 66043826
Centisome position: 10.47
GC content: 62.04
Gene sequence:
>1536_bases ATGCCGACAGTACACGCAGCACATCACCTCGTTCCGAAGACGCTGGATGCCTGGGTCAAACTGCTTGACGGCATAGCGTT GCCGGTCCCTGCCGTCAATCATGGACACGTCCGCGCCGCACTGAACGACAGTCGTCGGTCGCTGCGTGAAATTGCCGAAA TGATGCAGGAAAGTCCTGCGCTGGTGCTGAGCGTGATGCGCGAGGCCAACCATCACACCCACGGTTTGACCGAGCAGGCC GAGAGCCTTGAAATTGCCATCAACCGCCTGGGTCTGGCGCGTACCGAAGTCCTGCTGGGCCGTTTACCGGCCAAGCCGTC CGAAGAAATTCCTGCGGCCTATCGCCAACTGATTCTGGTCAGCCAGCACGCCACGCAACAAGCCAACGGCCTGTTCGCCA GCCGGCTGGCGCGACTCTGGCAGGACATCCACATGGGCAGCCTGCTGTTTCTGTCGCCGCTCTGGCCGATGGCGCTGGCT TATCCGAAGCTGCTCGAAGAGCTGGAACTGCGGGTTATCCACAAGGGCCATTCCAGCGCTGCAGTGGAAAAAGAGCTGTT CGGCGTCAACCTGCTGGAACTGTGCCTGGCACTCGCCGAGTTCTGGCGCCTGCCGATCTGGGTTACGCGCGGCTATAAAC TGTTGATCAACGAGCGACGCGATCTGGCCAAGGCGCTGCGTATCGCCCGCGAAGACAACAGCCCGCTGCAGCAGCAACAA CTCATGGACGACGACCCCAACCTGCGCCGCTGGCTGAACCAGCCCGCCAATACCGTGTTGCTGGGCAACGGCCTGGCGCT GGCGGCACAACAGGCCTGGAACAGCCCGCATTGCCTGCGCTGGGAACGGCTGACCAGCCTGTACCTGCAACAGCCGATCA GCGAAGTACAGCAACAGGCGCACCAGAATGCGGCCAGCAGCGCACGCGTCTATGCGGAAAAAGACCTCTGGCACCCGGCC GAATCGCTGATCTGGCCGTGGGATGCACGGCGTGTAAGGCGCGACAATGAGCCTGCACCTCCGCCATCGGCTGACGCCCT GCAAATGTGGCGCAAGCAATGCGCCGAACTGCTGCAGGACCCCAGCCCGTTCATCAACGCCATGCACCTGACCACCTCGG CGCGCGACGCCTTCATCTCGTGCGGCATGGAGCGGGTCATGCTGCTGATGCTGGACAAGACCTCAACGGTGCTGCGCGTC AATCAGACTGCCGGACTGCCGAAGGACGCCGCTGCCTTGCAGCTGTTCATCAAGGAAAGCACCGTACTGCAGCGCTTGCT GACCCAGCCGACGCAGTTACGCATGACGCCCGCCAACAGTGCGCAATTTGCCGCCCTGCTGCCCCCGCCGCTGAAAACCC TGTTCAGTGGCCAGCACTGGCTGATTCGCTCGCTGAGCAACAACGGCAAAGTCATGCTGCTGGTGGTCGCCGACCAGGGC GGCGGGGCCTTGTCGGAAATTTCCGTCCAGGCATTCGGAAAAACCGCGCAATGTATTGAACGGGCACTGGGCATCTTTAG TCATCGCAAAGCCTGA
Upstream 100 bases:
>100_bases AAAACCCATTTATGCGCCTCCATAAAAGGAGGAAAATGGCCTCAGCACCCCGTACGCTGGCGGTTTCCCAGCTCAGATAA TCAGCCGCACAGGCCCTCGA
Downstream 100 bases:
>100_bases GGCCTGGCGTACAATTCGCCCCTTTCCTTTCATCGGAGGCTGCAAATGTCCGCATTCACTGGCTTGTCGCTGGTCATCGA ACCCAACGATCTGCTTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase HDOD
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MPTVHAAHHLVPKTLDAWVKLLDGIALPVPAVNHGHVRAALNDSRRSLREIAEMMQESPALVLSVMREANHHTHGLTEQA ESLEIAINRLGLARTEVLLGRLPAKPSEEIPAAYRQLILVSQHATQQANGLFASRLARLWQDIHMGSLLFLSPLWPMALA YPKLLEELELRVIHKGHSSAAVEKELFGVNLLELCLALAEFWRLPIWVTRGYKLLINERRDLAKALRIAREDNSPLQQQQ LMDDDPNLRRWLNQPANTVLLGNGLALAAQQAWNSPHCLRWERLTSLYLQQPISEVQQQAHQNAASSARVYAEKDLWHPA ESLIWPWDARRVRRDNEPAPPPSADALQMWRKQCAELLQDPSPFINAMHLTTSARDAFISCGMERVMLLMLDKTSTVLRV NQTAGLPKDAAALQLFIKESTVLQRLLTQPTQLRMTPANSAQFAALLPPPLKTLFSGQHWLIRSLSNNGKVMLLVVADQG GGALSEISVQAFGKTAQCIERALGIFSHRKA
Sequences:
>Translated_511_residues MPTVHAAHHLVPKTLDAWVKLLDGIALPVPAVNHGHVRAALNDSRRSLREIAEMMQESPALVLSVMREANHHTHGLTEQA ESLEIAINRLGLARTEVLLGRLPAKPSEEIPAAYRQLILVSQHATQQANGLFASRLARLWQDIHMGSLLFLSPLWPMALA YPKLLEELELRVIHKGHSSAAVEKELFGVNLLELCLALAEFWRLPIWVTRGYKLLINERRDLAKALRIAREDNSPLQQQQ LMDDDPNLRRWLNQPANTVLLGNGLALAAQQAWNSPHCLRWERLTSLYLQQPISEVQQQAHQNAASSARVYAEKDLWHPA ESLIWPWDARRVRRDNEPAPPPSADALQMWRKQCAELLQDPSPFINAMHLTTSARDAFISCGMERVMLLMLDKTSTVLRV NQTAGLPKDAAALQLFIKESTVLQRLLTQPTQLRMTPANSAQFAALLPPPLKTLFSGQHWLIRSLSNNGKVMLLVVADQG GGALSEISVQAFGKTAQCIERALGIFSHRKA >Mature_510_residues PTVHAAHHLVPKTLDAWVKLLDGIALPVPAVNHGHVRAALNDSRRSLREIAEMMQESPALVLSVMREANHHTHGLTEQAE SLEIAINRLGLARTEVLLGRLPAKPSEEIPAAYRQLILVSQHATQQANGLFASRLARLWQDIHMGSLLFLSPLWPMALAY PKLLEELELRVIHKGHSSAAVEKELFGVNLLELCLALAEFWRLPIWVTRGYKLLINERRDLAKALRIAREDNSPLQQQQL MDDDPNLRRWLNQPANTVLLGNGLALAAQQAWNSPHCLRWERLTSLYLQQPISEVQQQAHQNAASSARVYAEKDLWHPAE SLIWPWDARRVRRDNEPAPPPSADALQMWRKQCAELLQDPSPFINAMHLTTSARDAFISCGMERVMLLMLDKTSTVLRVN QTAGLPKDAAALQLFIKESTVLQRLLTQPTQLRMTPANSAQFAALLPPPLKTLFSGQHWLIRSLSNNGKVMLLVVADQGG GALSEISVQAFGKTAQCIERALGIFSHRKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57141; Mature: 57010
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVHAAHHLVPKTLDAWVKLLDGIALPVPAVNHGHVRAALNDSRRSLREIAEMMQESPA CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCHH LVLSVMREANHHTHGLTEQAESLEIAINRLGLARTEVLLGRLPAKPSEEIPAAYRQLILV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SQHATQQANGLFASRLARLWQDIHMGSLLFLSPLWPMALAYPKLLEELELRVIHKGHSSA HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH AVEKELFGVNLLELCLALAEFWRLPIWVTRGYKLLINERRDLAKALRIAREDNSPLQQQQ HHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHEEHHHHHHHHHHHHHHHCCCCCHHHHH LMDDDPNLRRWLNQPANTVLLGNGLALAAQQAWNSPHCLRWERLTSLYLQQPISEVQQQA HCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH HQNAASSARVYAEKDLWHPAESLIWPWDARRVRRDNEPAPPPSADALQMWRKQCAELLQD HHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC PSPFINAMHLTTSARDAFISCGMERVMLLMLDKTSTVLRVNQTAGLPKDAAALQLFIKES CCHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH TVLQRLLTQPTQLRMTPANSAQFAALLPPPLKTLFSGQHWLIRSLSNNGKVMLLVVADQG HHHHHHHCCCCEEEECCCCCCCEEEECCCHHHHHHCCCHHHHHHHCCCCCEEEEEEECCC GGALSEISVQAFGKTAQCIERALGIFSHRKA CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTVHAAHHLVPKTLDAWVKLLDGIALPVPAVNHGHVRAALNDSRRSLREIAEMMQESPA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCHH LVLSVMREANHHTHGLTEQAESLEIAINRLGLARTEVLLGRLPAKPSEEIPAAYRQLILV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SQHATQQANGLFASRLARLWQDIHMGSLLFLSPLWPMALAYPKLLEELELRVIHKGHSSA HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH AVEKELFGVNLLELCLALAEFWRLPIWVTRGYKLLINERRDLAKALRIAREDNSPLQQQQ HHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHEEHHHHHHHHHHHHHHHCCCCCHHHHH LMDDDPNLRRWLNQPANTVLLGNGLALAAQQAWNSPHCLRWERLTSLYLQQPISEVQQQA HCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH HQNAASSARVYAEKDLWHPAESLIWPWDARRVRRDNEPAPPPSADALQMWRKQCAELLQD HHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC PSPFINAMHLTTSARDAFISCGMERVMLLMLDKTSTVLRVNQTAGLPKDAAALQLFIKES CCHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH TVLQRLLTQPTQLRMTPANSAQFAALLPPPLKTLFSGQHWLIRSLSNNGKVMLLVVADQG HHHHHHHCCCCEEEECCCCCCCEEEECCCHHHHHHCCCHHHHHHHCCCCCEEEEEEECCC GGALSEISVQAFGKTAQCIERALGIFSHRKA CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA