| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043825
Identifier: 66043825
GI number: 66043825
Start: 632329
End: 634113
Strand: Reverse
Name: 66043825
Synonym: Psyr_0558
Alternate gene names: NA
Gene position: 634113-632329 (Counterclockwise)
Preceding gene: 66043826
Following gene: 66043823
Centisome position: 10.41
GC content: 59.44
Gene sequence:
>1785_bases ATGAGTAATTTTAGCCTCCCTCTGCTATTGCGTGCGCCCACGCCGACGCAGTCGAGCCTGACATTCAGTGAAGCCAATCC CCGCGACCTCAAACGCTGGATCTCCAGACTGCCCAAGGCAAACCTCGGAGAAATGGCGCGTCAGCTCTATCAGGGGCTGA CCGAGCTGAACCAGTTGATCACCCCGAGTGAAAACCGCCTGCAATTGCTTGAATTGCTGCGGCCCGAGGTGTACTTCGTC TGCAAGCACCTCGAACGTCACTTTCTCAATCAGGCCATTGTGCTGGACGAGCGACCACGCAAGGTTGCCAACCTCTGCCA GGCGCTGCAAAACCATCTGGCGACCGGTTACAAGCAAATCATTCAGCAGGTCGCCCCGCGCTACACCCGAGACCAGGCCG GGCTGTTCAGCACCGCACTGCAACGAGCAGTGCACGGGCTCAACGGGCCGCTGATTCGCGCCAACCAGCTTTACTGTCCC ATTCAGGACGGCCTGTGGCTCGAGCTGCACCAGATTTATCAGATTGCCCGTCAGTACCAGCTACACAACACGCCGGTCGA AGAACCCCTGGCCCATCACAGCAAAGTGCTGAGCGTTGAACAGACCTATGTGATCGCACTGCTGATGGGCTGCTCGCGCT GCAATCAGATGCGCCAACTGAACATCGGCAAACTGGCCGATGCGCTGGAGGCCTGGAGCGCGCTGGTAAAACTGCAGTCG CCTGCCACGCAAAGCAGCCTCTTCGCCCTGGACCCGACGGCAGACAAACCGCCGCTGTATCGCACCCTGTTCAGTGACGA ACAATCACCCCGGCTGCTGGGCATCAATACCTTGGCGCTGGCGGAAGCGATCAATCAGTACCTGGCCCTGCCGGACGACC AGCGCACGCCCTCACCGCTGCTGATCCCAACCGGTATCAACACCGACCTGCTGCAACATCTGGCGGTCGCCTGGGGTGAT GTGGCCGAACGCACCTTTCAACGTACGCCCGGTCAGGGCACGCTGAGATTGTGCATCGGCATGAGCGCGCTGCATTTCTA TGTCGCTGGCCAGAAGTCGTTCAGCGAGCTGTTGCAATTGAACAGCGCCACCAGTGCAGCGAGCTTTTCGTTGAAGATGG CCAATGATGACGCGGACGACCCGTGGGCCTCTGCCTTCGATACTCAGCGTGGCAAGACCTCATCCGTTCTGCTGCCCTAC GAAGAGATTGAATACCCGAAAAACGACGGCGACAGCGACTCGCTGTCCAACAACCAGCACACGTTTCCGACCTTCGACCT GAATATCGTCAACCACAGCCCGGGCGGTTACTGCCTGGCGTGGCAGAAGGACGTGCCTCAACAGTTGCAGGCTGGCGAAC TGGTGGGTATTCAGGACGACGCAGGCCAGGGCTGGAGCGTTGCCATCGTGCGCTGGATCCGTCAGGTACGCAGCGGGGGC ACACAGATGGGCATCGAACTGATCGCCCCGTTTGCCCAGCCGTGCGGCATGCAACTGATTCGCGAACAACAGAACAGCCA GTACCTGCGAACTCTGATGCTGCCCGAAGTACGCGCCATGGAAAAACCGCCCACCGTGCTCGCACCGCGCCTGCCTTTTC AGGAAGGCAGCATGGTGATGATCAACGTCAACGGCGAAGAACGCCGCGCCTCACTGAGCAACCGGCAGGTCAGCAGCGCC AGTTACAATCAGTTTGAGTATCAGATGTACGACGCCCCGAAAGCCGCCGAAACCGAAAAGGCCATGCTGGATCAGGAATT CGATTCCTTGTGGGGCACGCTGTAG
Upstream 100 bases:
>100_bases TTCATGGGCGTATGCTCGGCATATCGCGGGTGCGCGATAACCTCGACCCCCCTATGAAGCCATCATCCAGGCCAGTGAGT TGTTGGAGTTTGTCTGTCAC
Downstream 100 bases:
>100_bases CGATCATTGCGACAGCCGTCGCGATTGCCCCTCGCCATCAGGAGCAGACCACGACGGCCTGAGCGTCAGCGCTTTCCCTC GCGGTCGCGCAAGCCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MSNFSLPLLLRAPTPTQSSLTFSEANPRDLKRWISRLPKANLGEMARQLYQGLTELNQLITPSENRLQLLELLRPEVYFV CKHLERHFLNQAIVLDERPRKVANLCQALQNHLATGYKQIIQQVAPRYTRDQAGLFSTALQRAVHGLNGPLIRANQLYCP IQDGLWLELHQIYQIARQYQLHNTPVEEPLAHHSKVLSVEQTYVIALLMGCSRCNQMRQLNIGKLADALEAWSALVKLQS PATQSSLFALDPTADKPPLYRTLFSDEQSPRLLGINTLALAEAINQYLALPDDQRTPSPLLIPTGINTDLLQHLAVAWGD VAERTFQRTPGQGTLRLCIGMSALHFYVAGQKSFSELLQLNSATSAASFSLKMANDDADDPWASAFDTQRGKTSSVLLPY EEIEYPKNDGDSDSLSNNQHTFPTFDLNIVNHSPGGYCLAWQKDVPQQLQAGELVGIQDDAGQGWSVAIVRWIRQVRSGG TQMGIELIAPFAQPCGMQLIREQQNSQYLRTLMLPEVRAMEKPPTVLAPRLPFQEGSMVMINVNGEERRASLSNRQVSSA SYNQFEYQMYDAPKAAETEKAMLDQEFDSLWGTL
Sequences:
>Translated_594_residues MSNFSLPLLLRAPTPTQSSLTFSEANPRDLKRWISRLPKANLGEMARQLYQGLTELNQLITPSENRLQLLELLRPEVYFV CKHLERHFLNQAIVLDERPRKVANLCQALQNHLATGYKQIIQQVAPRYTRDQAGLFSTALQRAVHGLNGPLIRANQLYCP IQDGLWLELHQIYQIARQYQLHNTPVEEPLAHHSKVLSVEQTYVIALLMGCSRCNQMRQLNIGKLADALEAWSALVKLQS PATQSSLFALDPTADKPPLYRTLFSDEQSPRLLGINTLALAEAINQYLALPDDQRTPSPLLIPTGINTDLLQHLAVAWGD VAERTFQRTPGQGTLRLCIGMSALHFYVAGQKSFSELLQLNSATSAASFSLKMANDDADDPWASAFDTQRGKTSSVLLPY EEIEYPKNDGDSDSLSNNQHTFPTFDLNIVNHSPGGYCLAWQKDVPQQLQAGELVGIQDDAGQGWSVAIVRWIRQVRSGG TQMGIELIAPFAQPCGMQLIREQQNSQYLRTLMLPEVRAMEKPPTVLAPRLPFQEGSMVMINVNGEERRASLSNRQVSSA SYNQFEYQMYDAPKAAETEKAMLDQEFDSLWGTL >Mature_593_residues SNFSLPLLLRAPTPTQSSLTFSEANPRDLKRWISRLPKANLGEMARQLYQGLTELNQLITPSENRLQLLELLRPEVYFVC KHLERHFLNQAIVLDERPRKVANLCQALQNHLATGYKQIIQQVAPRYTRDQAGLFSTALQRAVHGLNGPLIRANQLYCPI QDGLWLELHQIYQIARQYQLHNTPVEEPLAHHSKVLSVEQTYVIALLMGCSRCNQMRQLNIGKLADALEAWSALVKLQSP ATQSSLFALDPTADKPPLYRTLFSDEQSPRLLGINTLALAEAINQYLALPDDQRTPSPLLIPTGINTDLLQHLAVAWGDV AERTFQRTPGQGTLRLCIGMSALHFYVAGQKSFSELLQLNSATSAASFSLKMANDDADDPWASAFDTQRGKTSSVLLPYE EIEYPKNDGDSDSLSNNQHTFPTFDLNIVNHSPGGYCLAWQKDVPQQLQAGELVGIQDDAGQGWSVAIVRWIRQVRSGGT QMGIELIAPFAQPCGMQLIREQQNSQYLRTLMLPEVRAMEKPPTVLAPRLPFQEGSMVMINVNGEERRASLSNRQVSSAS YNQFEYQMYDAPKAAETEKAMLDQEFDSLWGTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66567; Mature: 66435
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFSLPLLLRAPTPTQSSLTFSEANPRDLKRWISRLPKANLGEMARQLYQGLTELNQLI CCCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC TPSENRLQLLELLRPEVYFVCKHLERHFLNQAIVLDERPRKVANLCQALQNHLATGYKQI CCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH IQQVAPRYTRDQAGLFSTALQRAVHGLNGPLIRANQLYCPIQDGLWLELHQIYQIARQYQ HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHH LHNTPVEEPLAHHSKVLSVEQTYVIALLMGCSRCNQMRQLNIGKLADALEAWSALVKLQS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC PATQSSLFALDPTADKPPLYRTLFSDEQSPRLLGINTLALAEAINQYLALPDDQRTPSPL CCCCCCEEEECCCCCCCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCE LIPTGINTDLLQHLAVAWGDVAERTFQRTPGQGTLRLCIGMSALHFYVAGQKSFSELLQL EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH NSATSAASFSLKMANDDADDPWASAFDTQRGKTSSVLLPYEEIEYPKNDGDSDSLSNNQH CCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCC TFPTFDLNIVNHSPGGYCLAWQKDVPQQLQAGELVGIQDDAGQGWSVAIVRWIRQVRSGG CCCEEEEEEEECCCCCEEEEECCCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC TQMGIELIAPFAQPCGMQLIREQQNSQYLRTLMLPEVRAMEKPPTVLAPRLPFQEGSMVM HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEE INVNGEERRASLSNRQVSSASYNQFEYQMYDAPKAAETEKAMLDQEFDSLWGTL EEECCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNFSLPLLLRAPTPTQSSLTFSEANPRDLKRWISRLPKANLGEMARQLYQGLTELNQLI CCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC TPSENRLQLLELLRPEVYFVCKHLERHFLNQAIVLDERPRKVANLCQALQNHLATGYKQI CCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH IQQVAPRYTRDQAGLFSTALQRAVHGLNGPLIRANQLYCPIQDGLWLELHQIYQIARQYQ HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHH LHNTPVEEPLAHHSKVLSVEQTYVIALLMGCSRCNQMRQLNIGKLADALEAWSALVKLQS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC PATQSSLFALDPTADKPPLYRTLFSDEQSPRLLGINTLALAEAINQYLALPDDQRTPSPL CCCCCCEEEECCCCCCCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCE LIPTGINTDLLQHLAVAWGDVAERTFQRTPGQGTLRLCIGMSALHFYVAGQKSFSELLQL EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH NSATSAASFSLKMANDDADDPWASAFDTQRGKTSSVLLPYEEIEYPKNDGDSDSLSNNQH CCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCC TFPTFDLNIVNHSPGGYCLAWQKDVPQQLQAGELVGIQDDAGQGWSVAIVRWIRQVRSGG CCCEEEEEEEECCCCCEEEEECCCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC TQMGIELIAPFAQPCGMQLIREQQNSQYLRTLMLPEVRAMEKPPTVLAPRLPFQEGSMVM HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEE INVNGEERRASLSNRQVSSASYNQFEYQMYDAPKAAETEKAMLDQEFDSLWGTL EEECCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA