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The map label for this gene is ydfH [C]

Identifier: 66043762

GI number: 66043762

Start: 537156

End: 537905

Strand: Reverse

Name: ydfH [C]

Synonym: Psyr_0495

Alternate gene names: 66043762

Gene position: 537905-537156 (Counterclockwise)

Preceding gene: 66043768

Following gene: 66043761

Centisome position: 8.83

GC content: 58.67

Gene sequence:

>750_bases
ATGAAGCATCTGTTGACCTTCGTCCTTGCCAGCCAATCAGCTGTCGTGGAATATCGACCTGGCTTTTCTTTCTCTGGACC
CTTTATGAACGACGCTGCTTCTACGCTCCCTCGCACCCTCGGAGAATCAATCACCACTGAGCTTCGCAGAATGCTGGTCG
AGGGCGAGCTGGTGCCTGGTCAGCGCCTCTCGGAAGCCGCTCTGGCCGAGAGTCTGGATATTTCCCGTAATACCCTGAGA
GAAGCCTTCAGAGTACTGACCCGCGAAGGACTGCTGACCCACGAGCCCAATCGCGGGGTCACCGTGGCCAAGCCTGATAT
GGCGTCGATCATCGATATCTACCGAATTCGGCGCTTCATCGAGTGCGGGGCGATTGCCCAGGCTTATCCACAGCATCCCG
GTGTGCTGCACATGCGCAATGCGGTCGAGGCAGGCGTGCAGGCGCGTGAAGCGAAGGACTGGATCGCCGTGGGCACCGCC
AACATGATGTTCCACAAGGCCATCGTCGAGCTGTCCGACAGCCCGCGACTGGTGACGTTTTATGCGCAGATATCGGCAGA
GTTGCGACTGGCCTTCGGCTTGCTCAACAATCCGGAACTGCTGCATTCGCCTTATCTGGACATGAATGCTGCGGTACTCG
GGCGCCTGGACGCGGGCAAGACCGATGAGGCAACGCGCATGCTCGAGGATTATCTGGTGCAATCGGAACGAACGATTCTG
GCCGCCTTCGAGCGAAGCCGGAACCGATAG

Upstream 100 bases:

>100_bases
AAGTTGTAGATACATAAAGATAATATTGTTGAACAATGTAGATGGCGTGGATCAACCATGTGCACCATGTTGTTACGCAG
GGACTCAGGTGTGCTACCTG

Downstream 100 bases:

>100_bases
TCCGGGCGCAGGCCTGATCACCAGAACTACCACCCTGGGACCCGGTCTACGGGTTCTGACCGTTGCAACACGCCCGACGA
GCCAGGCAGGCCGCCGCTTC

Product: transcriptional regulator GntR

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; GntR Family Regulatory; Transcriptional Regulator Gntr Family; FCD Domain Protein; GntR Domain Protein; Transcriptional Regulator GntR Family Protein; Transcriptonal Regulator; Transcriptional Regulator-Like Protein; GntR Domain-Containing Protein; Mn-Dependent Transcriptional Regulator; Transcriptional Regulator GntR; Transcriptional Regulatory Protein GntR Family; HTH-Type Transcriptional Regulator YdhC; Transcriptional Regulator Protein GntR Family; GntR Family Regulatory Protein; Transcription Regulator; Fatty Acid Metabolism Regulator Protein; TRANSCRIPTIONal REGULATOR GntR Family; Regulatory Protein GntR HTH

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKHLLTFVLASQSAVVEYRPGFSFSGPFMNDAASTLPRTLGESITTELRRMLVEGELVPGQRLSEAALAESLDISRNTLR
EAFRVLTREGLLTHEPNRGVTVAKPDMASIIDIYRIRRFIECGAIAQAYPQHPGVLHMRNAVEAGVQAREAKDWIAVGTA
NMMFHKAIVELSDSPRLVTFYAQISAELRLAFGLLNNPELLHSPYLDMNAAVLGRLDAGKTDEATRMLEDYLVQSERTIL
AAFERSRNR

Sequences:

>Translated_249_residues
MKHLLTFVLASQSAVVEYRPGFSFSGPFMNDAASTLPRTLGESITTELRRMLVEGELVPGQRLSEAALAESLDISRNTLR
EAFRVLTREGLLTHEPNRGVTVAKPDMASIIDIYRIRRFIECGAIAQAYPQHPGVLHMRNAVEAGVQAREAKDWIAVGTA
NMMFHKAIVELSDSPRLVTFYAQISAELRLAFGLLNNPELLHSPYLDMNAAVLGRLDAGKTDEATRMLEDYLVQSERTIL
AAFERSRNR
>Mature_249_residues
MKHLLTFVLASQSAVVEYRPGFSFSGPFMNDAASTLPRTLGESITTELRRMLVEGELVPGQRLSEAALAESLDISRNTLR
EAFRVLTREGLLTHEPNRGVTVAKPDMASIIDIYRIRRFIECGAIAQAYPQHPGVLHMRNAVEAGVQAREAKDWIAVGTA
NMMFHKAIVELSDSPRLVTFYAQISAELRLAFGLLNNPELLHSPYLDMNAAVLGRLDAGKTDEATRMLEDYLVQSERTIL
AAFERSRNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27728; Mature: 27728

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLLTFVLASQSAVVEYRPGFSFSGPFMNDAASTLPRTLGESITTELRRMLVEGELVPG
CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QRLSEAALAESLDISRNTLREAFRVLTREGLLTHEPNRGVTVAKPDMASIIDIYRIRRFI
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCEEEECCHHHHHHHHHHHHHHH
ECGAIAQAYPQHPGVLHMRNAVEAGVQAREAKDWIAVGTANMMFHKAIVELSDSPRLVTF
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCEEEE
YAQISAELRLAFGLLNNPELLHSPYLDMNAAVLGRLDAGKTDEATRMLEDYLVQSERTIL
HHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH
AAFERSRNR
HHHHHHCCC
>Mature Secondary Structure
MKHLLTFVLASQSAVVEYRPGFSFSGPFMNDAASTLPRTLGESITTELRRMLVEGELVPG
CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QRLSEAALAESLDISRNTLREAFRVLTREGLLTHEPNRGVTVAKPDMASIIDIYRIRRFI
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCEEEECCHHHHHHHHHHHHHHH
ECGAIAQAYPQHPGVLHMRNAVEAGVQAREAKDWIAVGTANMMFHKAIVELSDSPRLVTF
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCEEEE
YAQISAELRLAFGLLNNPELLHSPYLDMNAAVLGRLDAGKTDEATRMLEDYLVQSERTIL
HHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH
AAFERSRNR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA