| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043708
Identifier: 66043708
GI number: 66043708
Start: 478811
End: 479206
Strand: Reverse
Name: 66043708
Synonym: Psyr_0441
Alternate gene names: NA
Gene position: 479206-478811 (Counterclockwise)
Preceding gene: 66043718
Following gene: 66043706
Centisome position: 7.86
GC content: 62.88
Gene sequence:
>396_bases ATGTCATTTATAGTCAGGGAAGGCGATCTCACCACCACCGGCGGCTTCGTACTGGCCGCATCGGCAAGCGAAGTCATCGA GCGGCGTCGTGTAGCCCGCATGGGAGACCCGGTCTGGTGCCCGGCCTGCCGGGAGATTGGCTTCATCGCCCAGGGCAACC CCACCTACATCGACGAACTCGTGGCGGTCGCCACGCAGGGTCATGAGGTGCAGTGTGGCTGCGAACCCGGCAGCAATACG CTGACCACCTCGCAGGAGCATGTCCAGGCCGACATGGACGCGACCATCACCATCCCCGAAGAACTGGCCAACACTGCCCG CCAGAATGCCGAACACCTGGCCCGTTCGATGAAGGACGGCAGCTTCACGCCTGATGTATTGAGGCCGCTGACGTAG
Upstream 100 bases:
>100_bases GTAATTGCGTAGGACCGGTCTTTAAAGGGCCAGGGGAGCTATCGGAATCCGTATTTGCGCCTAGCCTTGAGGTTTTCCGT AACCCAGAGGCAGTAGCGCC
Downstream 100 bases:
>100_bases CGAGAGTTGCGCGGTAGAACGCCCGTCAAAGGGCTTAGGAGCGAACCGGGAGTTTGCGGTGTCCTGTAGGAGCGGACTTG TCCGCGAAGAGGGCGTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSFIVREGDLTTTGGFVLAASASEVIERRRVARMGDPVWCPACREIGFIAQGNPTYIDELVAVATQGHEVQCGCEPGSNT LTTSQEHVQADMDATITIPEELANTARQNAEHLARSMKDGSFTPDVLRPLT
Sequences:
>Translated_131_residues MSFIVREGDLTTTGGFVLAASASEVIERRRVARMGDPVWCPACREIGFIAQGNPTYIDELVAVATQGHEVQCGCEPGSNT LTTSQEHVQADMDATITIPEELANTARQNAEHLARSMKDGSFTPDVLRPLT >Mature_130_residues SFIVREGDLTTTGGFVLAASASEVIERRRVARMGDPVWCPACREIGFIAQGNPTYIDELVAVATQGHEVQCGCEPGSNTL TTSQEHVQADMDATITIPEELANTARQNAEHLARSMKDGSFTPDVLRPLT
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14148; Mature: 14017
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIVREGDLTTTGGFVLAASASEVIERRRVARMGDPVWCPACREIGFIAQGNPTYIDEL CCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCEEECCCCHHHHHH VAVATQGHEVQCGCEPGSNTLTTSQEHVQADMDATITIPEELANTARQNAEHLARSMKDG HHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCC SFTPDVLRPLT CCCHHHHCCCC >Mature Secondary Structure SFIVREGDLTTTGGFVLAASASEVIERRRVARMGDPVWCPACREIGFIAQGNPTYIDEL CEEEECCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCEEECCCCHHHHHH VAVATQGHEVQCGCEPGSNTLTTSQEHVQADMDATITIPEELANTARQNAEHLARSMKDG HHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCC SFTPDVLRPLT CCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA