| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043697
Identifier: 66043697
GI number: 66043697
Start: 470002
End: 470616
Strand: Reverse
Name: 66043697
Synonym: Psyr_0430
Alternate gene names: NA
Gene position: 470616-470002 (Counterclockwise)
Preceding gene: 66043698
Following gene: 66043696
Centisome position: 7.72
GC content: 60.81
Gene sequence:
>615_bases ATGAACCGCCCGCTTCGCACCTTGATTCTGCTGGGTCTGCTGTGCCTTTCGTCCCTGGCGCAGGCTTTCGACCTGCAACA ACTGAGCGACCAGCTCGCCAAACCTGCCGTGGTGCAGGGTCGTTTCGTTCAGGAAAAACACCTGCGCGCCCTGCCGCAAC CGCTGCTCAGCAAGGGCCGCTTCGTGCTCGCCAGGGATTTCGGGCTGCTCTGGCTGCTGGAAACACCGCTCAAGCAGGAT TACCGCATCAATGCCGACGGTATTGCCCGTCGTGAAACCGCTGGCAATGTCAGCACCTGGAAGCCGGTGCCGAACAAGAA CGCCGGCGCCGAGCAGAACCGTCTGTTTCTGGCGGTCCTGCAAGGCGACAGCAGCGGCCTGCAACGGGATTTCGACTTGC AGCTCAAGGGCGAAGCGACTGCCTGGCACCTCACCCTGACGCCACGCTCGATGCTGCTGCAACAAGTGTTCAAGCAGATC AACATCGACGGCGGCGAACTGGTGCAGCGTATCGAGCTGCTGGAAACCCAGGGCGACAGCACGGTCCTGAAAATGATCGA CAGCAGCAGTGCCACGACCCTGACCGATGCGCAGCGTAATGACTTCAAAGACTGA
Upstream 100 bases:
>100_bases CCGTCGACAGCCAGAGCCGGGAAATGCAACTGGCTTCGCCGCAAGTGTTCATCGATGCCGTGAAAAATGCCCTTGAGAGC ACAATAGAGAGCGCCTCGCC
Downstream 100 bases:
>100_bases GCGGCTGTTGCCGCGACTGTTCCTGCTGATTCTGGCGGGCGTATTGGCGCTGGCTGGCTGGCAGTGGCACGACCGCTCGC CGCTGTCGGCCAACCTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Flagellum-Specific ATP Synthase; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNRPLRTLILLGLLCLSSLAQAFDLQQLSDQLAKPAVVQGRFVQEKHLRALPQPLLSKGRFVLARDFGLLWLLETPLKQD YRINADGIARRETAGNVSTWKPVPNKNAGAEQNRLFLAVLQGDSSGLQRDFDLQLKGEATAWHLTLTPRSMLLQQVFKQI NIDGGELVQRIELLETQGDSTVLKMIDSSSATTLTDAQRNDFKD
Sequences:
>Translated_204_residues MNRPLRTLILLGLLCLSSLAQAFDLQQLSDQLAKPAVVQGRFVQEKHLRALPQPLLSKGRFVLARDFGLLWLLETPLKQD YRINADGIARRETAGNVSTWKPVPNKNAGAEQNRLFLAVLQGDSSGLQRDFDLQLKGEATAWHLTLTPRSMLLQQVFKQI NIDGGELVQRIELLETQGDSTVLKMIDSSSATTLTDAQRNDFKD >Mature_204_residues MNRPLRTLILLGLLCLSSLAQAFDLQQLSDQLAKPAVVQGRFVQEKHLRALPQPLLSKGRFVLARDFGLLWLLETPLKQD YRINADGIARRETAGNVSTWKPVPNKNAGAEQNRLFLAVLQGDSSGLQRDFDLQLKGEATAWHLTLTPRSMLLQQVFKQI NIDGGELVQRIELLETQGDSTVLKMIDSSSATTLTDAQRNDFKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22792; Mature: 22792
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPLRTLILLGLLCLSSLAQAFDLQQLSDQLAKPAVVQGRFVQEKHLRALPQPLLSKGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCCHHHHHCCC FVLARDFGLLWLLETPLKQDYRINADGIARRETAGNVSTWKPVPNKNAGAEQNRLFLAVL EEEEECCCEEEEECCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE QGDSSGLQRDFDLQLKGEATAWHLTLTPRSMLLQQVFKQINIDGGELVQRIELLETQGDS ECCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH TVLKMIDSSSATTLTDAQRNDFKD HHHHHHCCCCCCEECCCCCCCCCC >Mature Secondary Structure MNRPLRTLILLGLLCLSSLAQAFDLQQLSDQLAKPAVVQGRFVQEKHLRALPQPLLSKGR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCCHHHHHCCC FVLARDFGLLWLLETPLKQDYRINADGIARRETAGNVSTWKPVPNKNAGAEQNRLFLAVL EEEEECCCEEEEECCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE QGDSSGLQRDFDLQLKGEATAWHLTLTPRSMLLQQVFKQINIDGGELVQRIELLETQGDS ECCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH TVLKMIDSSSATTLTDAQRNDFKD HHHHHHCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA