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The map label for this gene is ssuC [C]

Identifier: 66043608

GI number: 66043608

Start: 361263

End: 362198

Strand: Direct

Name: ssuC [C]

Synonym: Psyr_0339

Alternate gene names: 66043608

Gene position: 361263-362198 (Clockwise)

Preceding gene: 66043607

Following gene: 66043609

Centisome position: 5.93

GC content: 60.15

Gene sequence:

>936_bases
ATGCTGTGCGTATTAATGCTTCCCAGAGCGTTCTGTATACGCTTTTTACGACTACCGAGAACCCGAATCATGAGCCTCGC
ACCTCCCGCTCGCGAAGAATATGAAATCACGCTGGAGCCTTTCACTCAGGAAGACCTGGCCCGCGATCTGCCCCTGGCAC
AGCGCATCTGGCAACTGGGCTGGGTGCGCAAATGCGTCATCATGATCGCCCTGGCGGTGATCTGGGAACTGGCCGCACGT
CTGCAGAACAACGACCTGCTGTTGCCGAGCTTTCTGCAAACAGCCGCCGCCTTTTATGACGGGCTGATTTCCGGTGAGTT
GCCGGGCAAGGTCTGGATCTCCCTGACCGTACTGATTCAGGGCTACCTGATCGGCATCGTGCTGGCGTTCGCCCTGACCA
CCCTGGCAGTGTCCACCCAACTGGGCCGCGACCTGCTCAGCACGCTGACTGCGATGTTCAACCCGCTACCGGCCATTGCC
CTGCTACCGCTGGCGCTGCTTTGGTTCGGGCTGGGTCAGAACAGCCTGATCTTTGTGCTGGTGCATTCGGTGCTGTGGGC
ACTGGCGCTCAATACTTACGCGGGCTTTCTGGGTGTCTCGGAAACCCAGCGCATGGCCGGGCGCAACTATGGTCTCAAAG
GCCTGCGCTTTGTCTGGCACATCCTGATTCCTGCTGCGCTGCCATCGATTCTCGCCGGTCTGAAAATCGGCTGGGCCTTT
GCCTGGCGCACGCTGATCGCCGCCGAGCTGGTGTTTGGCGCGTCCTCCGGCAAGGGCGGTCTGGGCTGGTACATCTTCCA
GAACCGTAACGAGCTGTATACCGACAAGGTCTTCGCAGGCCTGGCAGCAGTGATCCTCATCGGCCTGCTGGTCGAGAACC
TGCTGTTCGCCAACATCGAACGCCTGACCGTCAAGCGCTGGGGCATGCAGCGTTGA

Upstream 100 bases:

>100_bases
AGACGGTAGTTCAGACAATGCATCTTCTGAGAATGTAACGGCCCATTCGCGAACAAACTCGCTCCACGCCCTGCGAGCAG
AATCAAAGGCTAAATAATGA

Downstream 100 bases:

>100_bases
AACGCCGTCTTTTTTTGAATAATCAGGGTGAGAACCACATGAACACTGCATTTCAACGCCCGGCACTGAGTGTGTTGGCG
GCGACGCTTGGCTTGTTTGG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MLCVLMLPRAFCIRFLRLPRTRIMSLAPPAREEYEITLEPFTQEDLARDLPLAQRIWQLGWVRKCVIMIALAVIWELAAR
LQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIVLAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIA
LLPLALLWFGLGQNSLIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWAF
AWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFANIERLTVKRWGMQR

Sequences:

>Translated_311_residues
MLCVLMLPRAFCIRFLRLPRTRIMSLAPPAREEYEITLEPFTQEDLARDLPLAQRIWQLGWVRKCVIMIALAVIWELAAR
LQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIVLAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIA
LLPLALLWFGLGQNSLIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWAF
AWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFANIERLTVKRWGMQR
>Mature_311_residues
MLCVLMLPRAFCIRFLRLPRTRIMSLAPPAREEYEITLEPFTQEDLARDLPLAQRIWQLGWVRKCVIMIALAVIWELAAR
LQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQGYLIGIVLAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIA
LLPLALLWFGLGQNSLIFVLVHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWAF
AWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFANIERLTVKRWGMQR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=225, Percent_Identity=30.6666666666667, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786564, Length=161, Percent_Identity=34.7826086956522, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34579; Mature: 34579

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCVLMLPRAFCIRFLRLPRTRIMSLAPPAREEYEITLEPFTQEDLARDLPLAQRIWQLG
CEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHH
WVRKCVIMIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GYLIGIVLAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLGQNSLIFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
VHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWAF
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFANIE
HHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLTVKRWGMQR
HHHHHHCCCCC
>Mature Secondary Structure
MLCVLMLPRAFCIRFLRLPRTRIMSLAPPAREEYEITLEPFTQEDLARDLPLAQRIWQLG
CEEHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHH
WVRKCVIMIALAVIWELAARLQNNDLLLPSFLQTAAAFYDGLISGELPGKVWISLTVLIQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GYLIGIVLAFALTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLGQNSLIFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
VHSVLWALALNTYAGFLGVSETQRMAGRNYGLKGLRFVWHILIPAALPSILAGLKIGWAF
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDKVFAGLAAVILIGLLVENLLFANIE
HHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLTVKRWGMQR
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]