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The map label for this gene is visC [H]

Identifier: 66043592

GI number: 66043592

Start: 340076

End: 341305

Strand: Direct

Name: visC [H]

Synonym: Psyr_0323

Alternate gene names: 66043592

Gene position: 340076-341305 (Clockwise)

Preceding gene: 66043591

Following gene: 66043594

Centisome position: 5.58

GC content: 64.96

Gene sequence:

>1230_bases
ATGGAAACGCGCGCAGATGTGCTGATTGTCGGAGCCGGAATGGTCGGCAGTGCCCTTGCCTTGGCATTGCAGGACAGCGG
CCTTGATGTGCTGGTGGTCGACGGTGGGCCGCTGAGCGTCGAACCGTTTGATCAGCAGTCGAGCTTCGAGCCGCGGGTCA
GCGCCTTGTCGGCGGCCAGCCAGCGAATCCTTCAGCGGCTGGGCGTGTGGGAAGGCATCGCAGCCCGGCGCATCAGCCCG
TATGCGCATATGCAGGTCTGGGACGGCAGCGGCACCGGGCAGATTCACTTCTCGGCCTCCAGCGTGCATGCCGACGTGCT
CGGTCACATCATCGAGAATCGTGTGGTGCAGGACGCGTTGCTCGACCGTCTGCATGCCAGCGACATCGGCCTGCTGGCCA
ATGCGCGGCTTGAACAGATGCGTCACTCCGGCGATGACTGGCTGCTGACCCTGGCTGATGGCCGTCAGCTGCGCGCACCG
CTGGTGGTGGCTGCCGACGGTGCCAATTCCGCCGTGCGCCGCCTGACTGAAACGCCGACGCGTGAATGGGATTACCTGCA
TCACGCGATCGTCACCAGTGTGCGCACTGCCGATCCCCACAGGAAAACCGCCTGGCAGCGTTTCACCGATGACGGGCCGC
TGGCCTTTCTGCCACTGGAGCGTGAGGGCGAGCACTGGTGTTCCATCGTCTGGTCAGTCACACCTGCCGAAGCCGAGCGC
CTGATGGTGCTGGAAGATGACCTGTTCTGCCGCGAACTGGAGCAGGCATTCGAAGGACGACTGGGCCAGGTGCTGTCTGC
CGATAGCCGCCTGTGTGTGCCGCTGCGTCAGCGTCACGCCAAGCGTTACGTTGCCGGAGGATTGGCACTGATTGGTGATG
CGGCCCACACCATTCACCCGCTGGCCGGGCAGGGCGTGAACCTCGGTTTTCTCGACGCCGCAGTGCTGGCGGAGGTCCTG
ACCCATGCCGCAAGGCGCGGCGAGCGCTGGTCTGACCTGCGTGTGCTGGGCCGCTACGAGCGCCGCCGCATGCCGCACAA
CCTTGCACTGATGGCCGCGATGGAAGGCTTCGAACGCCTGTTCCAGGCCGACCCGCTGCCCTTGCGCTGGTTGCGCAACA
CCGGCCTGAAAATGGTCAACCGCATGCCCGAAGCCAAGGCGCTGTTTGTCCGCGAGGCACTGGGTTTGTCGGGGGATCTG
CCTGAACTGGCGCGGATCGAAGCACGCTAG

Upstream 100 bases:

>100_bases
CTGGTTTGCCCGCCAGGCCATGGGGTTGGGGACTCGATCCGATGTGTGAATCACCCACTTTAAACACAGGGCTTCGGCCG
CAAGCGAGAACGGTTTGACC

Downstream 100 bases:

>100_bases
AAACCAAAACATACCTACGCGGAGCCCAGGCGCGACGGTGTTCTTGAGAGCACTATCGTTCCTCACGCTTCAGCGTCGCG
TGACGCTCTACGTAACATAA

Product: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
METRADVLIVGAGMVGSALALALQDSGLDVLVVDGGPLSVEPFDQQSSFEPRVSALSAASQRILQRLGVWEGIAARRISP
YAHMQVWDGSGTGQIHFSASSVHADVLGHIIENRVVQDALLDRLHASDIGLLANARLEQMRHSGDDWLLTLADGRQLRAP
LVVAADGANSAVRRLTETPTREWDYLHHAIVTSVRTADPHRKTAWQRFTDDGPLAFLPLEREGEHWCSIVWSVTPAEAER
LMVLEDDLFCRELEQAFEGRLGQVLSADSRLCVPLRQRHAKRYVAGGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVL
THAARRGERWSDLRVLGRYERRRMPHNLALMAAMEGFERLFQADPLPLRWLRNTGLKMVNRMPEAKALFVREALGLSGDL
PELARIEAR

Sequences:

>Translated_409_residues
METRADVLIVGAGMVGSALALALQDSGLDVLVVDGGPLSVEPFDQQSSFEPRVSALSAASQRILQRLGVWEGIAARRISP
YAHMQVWDGSGTGQIHFSASSVHADVLGHIIENRVVQDALLDRLHASDIGLLANARLEQMRHSGDDWLLTLADGRQLRAP
LVVAADGANSAVRRLTETPTREWDYLHHAIVTSVRTADPHRKTAWQRFTDDGPLAFLPLEREGEHWCSIVWSVTPAEAER
LMVLEDDLFCRELEQAFEGRLGQVLSADSRLCVPLRQRHAKRYVAGGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVL
THAARRGERWSDLRVLGRYERRRMPHNLALMAAMEGFERLFQADPLPLRWLRNTGLKMVNRMPEAKALFVREALGLSGDL
PELARIEAR
>Mature_409_residues
METRADVLIVGAGMVGSALALALQDSGLDVLVVDGGPLSVEPFDQQSSFEPRVSALSAASQRILQRLGVWEGIAARRISP
YAHMQVWDGSGTGQIHFSASSVHADVLGHIIENRVVQDALLDRLHASDIGLLANARLEQMRHSGDDWLLTLADGRQLRAP
LVVAADGANSAVRRLTETPTREWDYLHHAIVTSVRTADPHRKTAWQRFTDDGPLAFLPLEREGEHWCSIVWSVTPAEAER
LMVLEDDLFCRELEQAFEGRLGQVLSADSRLCVPLRQRHAKRYVAGGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVL
THAARRGERWSDLRVLGRYERRRMPHNLALMAAMEGFERLFQADPLPLRWLRNTGLKMVNRMPEAKALFVREALGLSGDL
PELARIEAR

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=402, Percent_Identity=31.8407960199005, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI32967307, Length=345, Percent_Identity=32.1739130434783, Blast_Score=156, Evalue=3e-38,
Organism=Escherichia coli, GI1789273, Length=402, Percent_Identity=47.0149253731343, Blast_Score=320, Evalue=1e-88,
Organism=Escherichia coli, GI1786883, Length=392, Percent_Identity=39.7959183673469, Blast_Score=255, Evalue=3e-69,
Organism=Escherichia coli, GI1789274, Length=391, Percent_Identity=32.9923273657289, Blast_Score=182, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI25146631, Length=432, Percent_Identity=30.0925925925926, Blast_Score=185, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6321694, Length=459, Percent_Identity=27.6688453159041, Blast_Score=142, Evalue=7e-35,
Organism=Drosophila melanogaster, GI19920760, Length=424, Percent_Identity=32.5471698113208, Blast_Score=199, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45160; Mature: 45160

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRADVLIVGAGMVGSALALALQDSGLDVLVVDGGPLSVEPFDQQSSFEPRVSALSAAS
CCCCCCEEEEECCHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
QRILQRLGVWEGIAARRISPYAHMQVWDGSGTGQIHFSASSVHADVLGHIIENRVVQDAL
HHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
LDRLHASDIGLLANARLEQMRHSGDDWLLTLADGRQLRAPLVVAADGANSAVRRLTETPT
HHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCC
REWDYLHHAIVTSVRTADPHRKTAWQRFTDDGPLAFLPLEREGEHWCSIVWSVTPAEAER
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECHHCCCE
LMVLEDDLFCRELEQAFEGRLGQVLSADSRLCVPLRQRHAKRYVAGGLALIGDAAHTIHP
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCHHEECCCHHHHCC
LAGQGVNLGFLDAAVLAEVLTHAARRGERWSDLRVLGRYERRRMPHNLALMAAMEGFERL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FQADPLPLRWLRNTGLKMVNRMPEAKALFVREALGLSGDLPELARIEAR
HHCCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure
METRADVLIVGAGMVGSALALALQDSGLDVLVVDGGPLSVEPFDQQSSFEPRVSALSAAS
CCCCCCEEEEECCHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
QRILQRLGVWEGIAARRISPYAHMQVWDGSGTGQIHFSASSVHADVLGHIIENRVVQDAL
HHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
LDRLHASDIGLLANARLEQMRHSGDDWLLTLADGRQLRAPLVVAADGANSAVRRLTETPT
HHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCC
REWDYLHHAIVTSVRTADPHRKTAWQRFTDDGPLAFLPLEREGEHWCSIVWSVTPAEAER
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECHHCCCE
LMVLEDDLFCRELEQAFEGRLGQVLSADSRLCVPLRQRHAKRYVAGGLALIGDAAHTIHP
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCHHEECCCHHHHCC
LAGQGVNLGFLDAAVLAEVLTHAARRGERWSDLRVLGRYERRRMPHNLALMAAMEGFERL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FQADPLPLRWLRNTGLKMVNRMPEAKALFVREALGLSGDLPELARIEAR
HHCCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]