| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is glpT [H]
Identifier: 66043575
GI number: 66043575
Start: 325019
End: 326368
Strand: Reverse
Name: glpT [H]
Synonym: Psyr_0305
Alternate gene names: 66043575
Gene position: 326368-325019 (Counterclockwise)
Preceding gene: 66043577
Following gene: 66043568
Centisome position: 5.36
GC content: 61.19
Gene sequence:
>1350_bases ATGTTTGGGTTTTTCCGTCCTGCCAGGCATCAGGCACCCCTTCCCGAAGAAAAGGTCGACAGCACCTATCGGCGTCTGCG CTGGCAGATCTTCGCAGGCATCTTTATCGGCTATGCGGGTTACTACCTGCTGCGCAAGAATTTCTCGCTGGCGATGCCGT ATCTGATCGACGAAGGCTATACGCGTGGCCAGCTGGGCGTGGCGATGTCTGCCATTGCCATTGCCTACGGCTTGTCGAAA TTCCTCATGGGCATCGTTTCGGATCGCTCCAACCCGCGTTACTTCCTGCCGTTCGGCCTGCTGGTCTCTGCCGGGATCAT GTTCATCTTCGGCTTCGCGCCGTGGGCGACGTCCAGTGTCACGATCATGTTCGTGCTGCTGTTCATCAATGGCTGGGCAC AGGGCATGGGCTGGCCGCCGAGCGGGCGGACAATGGTTCACTGGTGGTCGCAGAAAGAGCGCGGCGGTGTGGTGTCGGTG TGGAACGTGGCGCACAACGTCGGCGGCGGCCTGATCGGCCCGCTGTTCCTGCTCGGCATGGGCTGGACCAACGACTGGCA TGCGGCGTTCTACGTGCCGGCGGCGGTTGCGTTGCTGGTCGCGGTGTTCGCCTTCGCGACCATGCGTGACACCCCGCAAT CGGTCGGCCTGCCGCCTATCGAGCACTACAAGAACGATTACCCGGAAGGCTACGATGCCAGCCACGAGGAAGAATTCAGC GCCCGGGAGATCTTCGTCAAGTACGTGCTGCGCAACAAGTTCCTGTGGTACATCGCCATGGCCAACGTGTTCGTTTATCT GCTGCGCTATGGCGTACTGGACTGGGCACCGACCTATCTCAAGGAAGCCAAACACTTCACGGTCGACAAGACCTCCTGGG CTTACTTTCTGTACGAGTGGGCGGGCATTCCGGGCACGCTGCTGTGCGGCTGGATGTCGGACAAGATCTTCAAGGGCAAT CGCGGCCTGACCGGCATGGTGTTCATGTTTCTGGTGACCATCGCCACGCTGGTGTACTGGCTGAACCCTGAAGGCAATCC GACCGTCGACATGATCGCGCTGGTGTCCATCGGTTTCCTGATCTACGGACCGGTGATGCTGATCGGCCTGCAGGCGCTGG AACTGGCACCGAAGAAGGCAGCAGGCACGGCCGCCGGCTTTACCGGGCTGTTCGGCTATCTGGGCGGGTCGGTCGCGGCC AGCGCAGCGATGGGCTACACGGTTGACCACTTCGGCTGGGATGGCGGCTTCGTGCTGTTGATCGGCGCGTGCATTCTGGC GATGGTGTTCCTTGCGCCGACGCTGCGGCACAAACAGGTCGCCAGCACATCTCGCGACACCAAAGGCTGA
Upstream 100 bases:
>100_bases TGCATTTCCTACAAAGAATCAGCCCGAAGGCACTGCTTTTTTCTGTAATGAAAATGTAATATTCGCATTCGCAAAAACAA CAATAATCAGGAGCTTCTCC
Downstream 100 bases:
>100_bases TCAGGCAGTCTCTGACTTGCAGCGCTTGAGCCGCGCCTCCAGATTCAGGTCTGGCATGGCGTGGCTACGCAGGGCCTTGG CGGTCTGCTCGACGTACTCG
Product: sn-glycerol-3-phosphate transporter
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: G-3-P transporter; G-3-P permease [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MFGFFRPARHQAPLPEEKVDSTYRRLRWQIFAGIFIGYAGYYLLRKNFSLAMPYLIDEGYTRGQLGVAMSAIAIAYGLSK FLMGIVSDRSNPRYFLPFGLLVSAGIMFIFGFAPWATSSVTIMFVLLFINGWAQGMGWPPSGRTMVHWWSQKERGGVVSV WNVAHNVGGGLIGPLFLLGMGWTNDWHAAFYVPAAVALLVAVFAFATMRDTPQSVGLPPIEHYKNDYPEGYDASHEEEFS AREIFVKYVLRNKFLWYIAMANVFVYLLRYGVLDWAPTYLKEAKHFTVDKTSWAYFLYEWAGIPGTLLCGWMSDKIFKGN RGLTGMVFMFLVTIATLVYWLNPEGNPTVDMIALVSIGFLIYGPVMLIGLQALELAPKKAAGTAAGFTGLFGYLGGSVAA SAAMGYTVDHFGWDGGFVLLIGACILAMVFLAPTLRHKQVASTSRDTKG
Sequences:
>Translated_449_residues MFGFFRPARHQAPLPEEKVDSTYRRLRWQIFAGIFIGYAGYYLLRKNFSLAMPYLIDEGYTRGQLGVAMSAIAIAYGLSK FLMGIVSDRSNPRYFLPFGLLVSAGIMFIFGFAPWATSSVTIMFVLLFINGWAQGMGWPPSGRTMVHWWSQKERGGVVSV WNVAHNVGGGLIGPLFLLGMGWTNDWHAAFYVPAAVALLVAVFAFATMRDTPQSVGLPPIEHYKNDYPEGYDASHEEEFS AREIFVKYVLRNKFLWYIAMANVFVYLLRYGVLDWAPTYLKEAKHFTVDKTSWAYFLYEWAGIPGTLLCGWMSDKIFKGN RGLTGMVFMFLVTIATLVYWLNPEGNPTVDMIALVSIGFLIYGPVMLIGLQALELAPKKAAGTAAGFTGLFGYLGGSVAA SAAMGYTVDHFGWDGGFVLLIGACILAMVFLAPTLRHKQVASTSRDTKG >Mature_449_residues MFGFFRPARHQAPLPEEKVDSTYRRLRWQIFAGIFIGYAGYYLLRKNFSLAMPYLIDEGYTRGQLGVAMSAIAIAYGLSK FLMGIVSDRSNPRYFLPFGLLVSAGIMFIFGFAPWATSSVTIMFVLLFINGWAQGMGWPPSGRTMVHWWSQKERGGVVSV WNVAHNVGGGLIGPLFLLGMGWTNDWHAAFYVPAAVALLVAVFAFATMRDTPQSVGLPPIEHYKNDYPEGYDASHEEEFS AREIFVKYVLRNKFLWYIAMANVFVYLLRYGVLDWAPTYLKEAKHFTVDKTSWAYFLYEWAGIPGTLLCGWMSDKIFKGN RGLTGMVFMFLVTIATLVYWLNPEGNPTVDMIALVSIGFLIYGPVMLIGLQALELAPKKAAGTAAGFTGLFGYLGGSVAA SAAMGYTVDHFGWDGGFVLLIGACILAMVFLAPTLRHKQVASTSRDTKG
Specific function: Responsible for glycerol-3-phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=437, Percent_Identity=28.604118993135, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI4503847, Length=437, Percent_Identity=28.604118993135, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI256219483, Length=437, Percent_Identity=28.604118993135, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI256219543, Length=451, Percent_Identity=28.3813747228381, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI256219564, Length=368, Percent_Identity=26.3586956521739, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI223717983, Length=413, Percent_Identity=24.9394673123487, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI38093649, Length=415, Percent_Identity=24.8192771084337, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI46361976, Length=405, Percent_Identity=24.9382716049383, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI49619231, Length=439, Percent_Identity=22.5512528473804, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI14150047, Length=251, Percent_Identity=27.0916334661355, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1788573, Length=445, Percent_Identity=72.1348314606741, Blast_Score=682, Evalue=0.0, Organism=Escherichia coli, GI87082310, Length=445, Percent_Identity=35.9550561797753, Blast_Score=272, Evalue=4e-74, Organism=Escherichia coli, GI2367259, Length=449, Percent_Identity=32.293986636971, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1789515, Length=432, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI87082320, Length=412, Percent_Identity=24.5145631067961, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI2367379, Length=359, Percent_Identity=23.6768802228412, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1789152, Length=438, Percent_Identity=21.0045662100457, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI133901854, Length=446, Percent_Identity=25.5605381165919, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI133901856, Length=446, Percent_Identity=25.5605381165919, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI133930953, Length=479, Percent_Identity=21.0855949895616, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17564202, Length=439, Percent_Identity=25.5125284738041, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17564204, Length=370, Percent_Identity=26.7567567567568, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17542316, Length=453, Percent_Identity=21.6335540838852, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17539138, Length=327, Percent_Identity=23.2415902140673, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24656861, Length=481, Percent_Identity=23.4927234927235, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI24656866, Length=481, Percent_Identity=23.4927234927235, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI45550478, Length=481, Percent_Identity=23.4927234927235, Blast_Score=99, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005267 - InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49832; Mature: 49832
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS50850 MFS ; PS00942 GLPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGFFRPARHQAPLPEEKVDSTYRRLRWQIFAGIFIGYAGYYLLRKNFSLAMPYLIDEGY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC TRGQLGVAMSAIAIAYGLSKFLMGIVSDRSNPRYFLPFGLLVSAGIMFIFGFAPWATSSV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHH TIMFVLLFINGWAQGMGWPPSGRTMVHWWSQKERGGVVSVWNVAHNVGGGLIGPLFLLGM HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHCCCHHHHHHHHHHC GWTNDWHAAFYVPAAVALLVAVFAFATMRDTPQSVGLPPIEHYKNDYPEGYDASHEEEFS CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCCCCCCCCCCCHHHHH AREIFVKYVLRNKFLWYIAMANVFVYLLRYGVLDWAPTYLKEAKHFTVDKTSWAYFLYEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCHHEEEEHHH AGIPGTLLCGWMSDKIFKGNRGLTGMVFMFLVTIATLVYWLNPEGNPTVDMIALVSIGFL CCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH IYGPVMLIGLQALELAPKKAAGTAAGFTGLFGYLGGSVAASAAMGYTVDHFGWDGGFVLL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHCCCCCHHHHH IGACILAMVFLAPTLRHKQVASTSRDTKG HHHHHHHHHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MFGFFRPARHQAPLPEEKVDSTYRRLRWQIFAGIFIGYAGYYLLRKNFSLAMPYLIDEGY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC TRGQLGVAMSAIAIAYGLSKFLMGIVSDRSNPRYFLPFGLLVSAGIMFIFGFAPWATSSV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHH TIMFVLLFINGWAQGMGWPPSGRTMVHWWSQKERGGVVSVWNVAHNVGGGLIGPLFLLGM HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHCCCHHHHHHHHHHC GWTNDWHAAFYVPAAVALLVAVFAFATMRDTPQSVGLPPIEHYKNDYPEGYDASHEEEFS CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHCCCCCCCCCCCCHHHHH AREIFVKYVLRNKFLWYIAMANVFVYLLRYGVLDWAPTYLKEAKHFTVDKTSWAYFLYEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCCHHEEEEHHH AGIPGTLLCGWMSDKIFKGNRGLTGMVFMFLVTIATLVYWLNPEGNPTVDMIALVSIGFL CCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH IYGPVMLIGLQALELAPKKAAGTAAGFTGLFGYLGGSVAASAAMGYTVDHFGWDGGFVLL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHCCCCCHHHHH IGACILAMVFLAPTLRHKQVASTSRDTKG HHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3329281; 9205837; 9278503; 3141744; 12893936 [H]