| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043484
Identifier: 66043484
GI number: 66043484
Start: 228159
End: 228527
Strand: Direct
Name: 66043484
Synonym: Psyr_0214
Alternate gene names: NA
Gene position: 228159-228527 (Clockwise)
Preceding gene: 66043483
Following gene: 66043486
Centisome position: 3.74
GC content: 56.37
Gene sequence:
>369_bases ATGAGTGACAGCTTGCAACCGTTCAGCAAACCGCCGCAAAGCGCTCGCCAGTGGGCGATGTTCTGTCACTTGTCGGCGTT TGCCGGACTGATGTTTCCGTTCGGCAATCTGCTGGGCCCGCTGATTATCTGGCAGTTGAAGAAAGACTCCGATCCGTTTA TCGACGCGCAAGGCAAGGAAGCGCTGAATTTTCAGATCACAGTCGCCATCGCGGCCACCGTCAGCATGCTGCTGGTGGTG CTGATCATCGGCTTTGCGTTACTGACGCTGGTGGGCATCGGTGCCGCAGCGCTGGCGATCATTGCCGGGATAAAAGCCAA TGACGGCGTCAATTATCGCTATCCGTTCACCTTGCGCCTGATCAAGTAG
Upstream 100 bases:
>100_bases GCTGAACGCGATGCTCGCGCTGGCGCAGAAAGGCATGACCGAATTGTTTGAATTGCAGCGCGCCGCGTTGGCCGACTGAT ACCCAGAAGGGGGTCCGATA
Downstream 100 bases:
>100_bases CATCACTTCAGGCAACGCAAAAAGCCGACTTCAAGTCGGCTTTTTCGTGTTCGCTGCCTTGCCTGGCTATCAGATAGTCA GGGTCCAGTCGTAATCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSDSLQPFSKPPQSARQWAMFCHLSAFAGLMFPFGNLLGPLIIWQLKKDSDPFIDAQGKEALNFQITVAIAATVSMLLVV LIIGFALLTLVGIGAAALAIIAGIKANDGVNYRYPFTLRLIK
Sequences:
>Translated_122_residues MSDSLQPFSKPPQSARQWAMFCHLSAFAGLMFPFGNLLGPLIIWQLKKDSDPFIDAQGKEALNFQITVAIAATVSMLLVV LIIGFALLTLVGIGAAALAIIAGIKANDGVNYRYPFTLRLIK >Mature_121_residues SDSLQPFSKPPQSARQWAMFCHLSAFAGLMFPFGNLLGPLIIWQLKKDSDPFIDAQGKEALNFQITVAIAATVSMLLVVL IIGFALLTLVGIGAAALAIIAGIKANDGVNYRYPFTLRLIK
Specific function: Unknown
COG id: COG3296
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13195; Mature: 13064
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLQPFSKPPQSARQWAMFCHLSAFAGLMFPFGNLLGPLIIWQLKKDSDPFIDAQGKE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC ALNFQITVAIAATVSMLLVVLIIGFALLTLVGIGAAALAIIAGIKANDGVNYRYPFTLRL EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEE IK EC >Mature Secondary Structure SDSLQPFSKPPQSARQWAMFCHLSAFAGLMFPFGNLLGPLIIWQLKKDSDPFIDAQGKE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC ALNFQITVAIAATVSMLLVVLIIGFALLTLVGIGAAALAIIAGIKANDGVNYRYPFTLRL EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEE IK EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA