| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043436
Identifier: 66043436
GI number: 66043436
Start: 180107
End: 181417
Strand: Direct
Name: 66043436
Synonym: Psyr_0166
Alternate gene names: NA
Gene position: 180107-181417 (Clockwise)
Preceding gene: 66043434
Following gene: 66043437
Centisome position: 2.96
GC content: 42.03
Gene sequence:
>1311_bases ATGGTTATGGCAAAAGTTAGAAAAATACCTTACTACACTATGGAGCGATCAATATTTCGAGGGAAGGTATGGAAAGAGAA TGATGGTTTAGATGGCGCAGTACCCATCAATACTCCACAAAAAATCTCTTACAATCGTTGTGCGCCTGGTCAAGTGTTCT TAAAGTCTGCTGAGCCTGGTGAAGAGCAGTTCATGGTGCCGCAAACAGAAGCGGGAGGTCAGAAATCAACTGCTGGGGTT AGAAAAAATAAGCCATTCTCCGTGGAATCTAAAACTTCAGTGTCTGATGCTCTAGAGGCTGATGCAGAAGATAAAGAAAA GCTTCCAGAGTTTGATCTTCAGGATATTCCTTTGGCCATGGACAATATTGGTTGGCCGATAGCTGCCAAGATTGCCAGAC AGTGGTTCGCAAGCCCTAAGCATATCTATAATGATCGACCCAATTCAATTCAGCCCATTGATGACGCAACCCTGACGTTA AAATGGGCGTTGAAGTATGGGAGCGTCGCAGAGAAATTCAACGAGTTGATTGAGGAAAAGATTTACTCTGAAAAAGCAAT TGCAGGCGCTAGACATAAAATTCTCAAGCGAGTAAAAAATAAATTTGATGAATCTAGGTCGGCAGCAAATCTTTCCTTTG ATACAGCTCCTTGGATAGGTGATATCAGGCAGTTTCATATTGATTGGCAAATTCAGTTTCAGGCAATATCAACAAGCAAC ACGCTTGACGGCCTGAGTTTAACTGATCTCACCGCGACGCTAGGGAGTTTTAATATTTATGCGGCCATTGGCGTGGTTGA AGTTGCTGTGGAAAAGTTTTACAAATATGACGATCAAGCCAGAACCAAAACATTTTGCGTCGACGCAACGGCGGCTATTA CCTGTGTGTATACCTACCTGAAAGATAACTATTCTTTTAATGACAAAAATGATGGTAGCAGCCAATATCTGGGCCACTGG AACAAAAATGATATGATTCTTTCTTACTCTGCCGTTGTCAGTGATCTGGTTGACGGTAAGAAAATTCATACCCGTATGGG AAGTACCCCGATAACTGAAACTAAAATCAATTGGGACTATTTGCCTGGAGGCCAGCTTGACAAGCCAGTGGATAAAAGAA CAGGTTTGGTAAGAAAATTTATGGAGAAAGATGTTTACTGGCCTGTTTACAACAGCTCTTATAGTGAGTGGAGAGAAAAG CATGGCCGGGGTGGCGATTTTATGATCTACAGCAGACCGAAAATCCACAAACTGAAAAAGCCCATCATTATAAAGCTGGA TACATTATGCAAACCTTCAGAACCCATGTAA
Upstream 100 bases:
>100_bases TCAAGCTAAACAATGCAAACCTCCGTTGCTTCGCCCCAGCGTTCCTACCGCTGCGTGATAGGTGCTGAGTAGATTTAGGA TTTGGTTGTTTTCCAAGGAA
Downstream 100 bases:
>100_bases GAAAAATGTATTTCCGCTCTTTTTTCTTCTTTATTTTTATGTTGATTGCTTTGGTTGTTTATTCCATTGCTTTCAACCTG TTCGACAACACTGATTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MVMAKVRKIPYYTMERSIFRGKVWKENDGLDGAVPINTPQKISYNRCAPGQVFLKSAEPGEEQFMVPQTEAGGQKSTAGV RKNKPFSVESKTSVSDALEADAEDKEKLPEFDLQDIPLAMDNIGWPIAAKIARQWFASPKHIYNDRPNSIQPIDDATLTL KWALKYGSVAEKFNELIEEKIYSEKAIAGARHKILKRVKNKFDESRSAANLSFDTAPWIGDIRQFHIDWQIQFQAISTSN TLDGLSLTDLTATLGSFNIYAAIGVVEVAVEKFYKYDDQARTKTFCVDATAAITCVYTYLKDNYSFNDKNDGSSQYLGHW NKNDMILSYSAVVSDLVDGKKIHTRMGSTPITETKINWDYLPGGQLDKPVDKRTGLVRKFMEKDVYWPVYNSSYSEWREK HGRGGDFMIYSRPKIHKLKKPIIIKLDTLCKPSEPM
Sequences:
>Translated_436_residues MVMAKVRKIPYYTMERSIFRGKVWKENDGLDGAVPINTPQKISYNRCAPGQVFLKSAEPGEEQFMVPQTEAGGQKSTAGV RKNKPFSVESKTSVSDALEADAEDKEKLPEFDLQDIPLAMDNIGWPIAAKIARQWFASPKHIYNDRPNSIQPIDDATLTL KWALKYGSVAEKFNELIEEKIYSEKAIAGARHKILKRVKNKFDESRSAANLSFDTAPWIGDIRQFHIDWQIQFQAISTSN TLDGLSLTDLTATLGSFNIYAAIGVVEVAVEKFYKYDDQARTKTFCVDATAAITCVYTYLKDNYSFNDKNDGSSQYLGHW NKNDMILSYSAVVSDLVDGKKIHTRMGSTPITETKINWDYLPGGQLDKPVDKRTGLVRKFMEKDVYWPVYNSSYSEWREK HGRGGDFMIYSRPKIHKLKKPIIIKLDTLCKPSEPM >Mature_436_residues MVMAKVRKIPYYTMERSIFRGKVWKENDGLDGAVPINTPQKISYNRCAPGQVFLKSAEPGEEQFMVPQTEAGGQKSTAGV RKNKPFSVESKTSVSDALEADAEDKEKLPEFDLQDIPLAMDNIGWPIAAKIARQWFASPKHIYNDRPNSIQPIDDATLTL KWALKYGSVAEKFNELIEEKIYSEKAIAGARHKILKRVKNKFDESRSAANLSFDTAPWIGDIRQFHIDWQIQFQAISTSN TLDGLSLTDLTATLGSFNIYAAIGVVEVAVEKFYKYDDQARTKTFCVDATAAITCVYTYLKDNYSFNDKNDGSSQYLGHW NKNDMILSYSAVVSDLVDGKKIHTRMGSTPITETKINWDYLPGGQLDKPVDKRTGLVRKFMEKDVYWPVYNSSYSEWREK HGRGGDFMIYSRPKIHKLKKPIIIKLDTLCKPSEPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49452; Mature: 49452
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMAKVRKIPYYTMERSIFRGKVWKENDGLDGAVPINTPQKISYNRCAPGQVFLKSAEPG CCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCC EEQFMVPQTEAGGQKSTAGVRKNKPFSVESKTSVSDALEADAEDKEKLPEFDLQDIPLAM CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCHH DNIGWPIAAKIARQWFASPKHIYNDRPNSIQPIDDATLTLKWALKYGSVAEKFNELIEEK HCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH IYSEKAIAGARHKILKRVKNKFDESRSAANLSFDTAPWIGDIRQFHIDWQIQFQAISTSN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEEEEEEEEEEECCCC TLDGLSLTDLTATLGSFNIYAAIGVVEVAVEKFYKYDDQARTKTFCVDATAAITCVYTYL CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH KDNYSFNDKNDGSSQYLGHWNKNDMILSYSAVVSDLVDGKKIHTRMGSTPITETKINWDY HCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCHHHHHHCCCCCCCEEEECEEE LPGGQLDKPVDKRTGLVRKFMEKDVYWPVYNSSYSEWREKHGRGGDFMIYSRPKIHKLKK CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCHHHHCCC PIIIKLDTLCKPSEPM CEEEEEECCCCCCCCC >Mature Secondary Structure MVMAKVRKIPYYTMERSIFRGKVWKENDGLDGAVPINTPQKISYNRCAPGQVFLKSAEPG CCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCC EEQFMVPQTEAGGQKSTAGVRKNKPFSVESKTSVSDALEADAEDKEKLPEFDLQDIPLAM CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCHH DNIGWPIAAKIARQWFASPKHIYNDRPNSIQPIDDATLTLKWALKYGSVAEKFNELIEEK HCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH IYSEKAIAGARHKILKRVKNKFDESRSAANLSFDTAPWIGDIRQFHIDWQIQFQAISTSN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEEEEEEEEEEECCCC TLDGLSLTDLTATLGSFNIYAAIGVVEVAVEKFYKYDDQARTKTFCVDATAAITCVYTYL CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH KDNYSFNDKNDGSSQYLGHWNKNDMILSYSAVVSDLVDGKKIHTRMGSTPITETKINWDY HCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCHHHHHHCCCCCCCEEEECEEE LPGGQLDKPVDKRTGLVRKFMEKDVYWPVYNSSYSEWREKHGRGGDFMIYSRPKIHKLKK CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCHHHHCCC PIIIKLDTLCKPSEPM CEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA