| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043398
Identifier: 66043398
GI number: 66043398
Start: 137161
End: 137526
Strand: Direct
Name: 66043398
Synonym: Psyr_0128
Alternate gene names: NA
Gene position: 137161-137526 (Clockwise)
Preceding gene: 66043397
Following gene: 66043399
Centisome position: 2.25
GC content: 53.01
Gene sequence:
>366_bases ATGTCCAAACTCGCAGAATACCGTCAGCTGGAAAAGCATCTCGCCGAGCAACTCCAGGCACTGGAGACGATGAAAGGCGA CCAGGGGCTCAAGAAGGAAATCGAGTTCGAAACCAAGCTGCGCAAGCTGCTTGAGCACTATGGCTTCAGCCTGAAGCACA TCATCAATCTGCTGGACCCACAGACTTCGTCCCGTGGGCAGACCGTCGAGAAACCAGCGGGCAAACGCAAACCGCGCGAA CTCAAGGTTTATAAGAATCCGAAAACCGGTGAAGTAATCGAGACCAAGGGTGGGAATCACAAGATTCTGAAGGAGTGGAA GGCGGAGCATGGTTCCGATGTTGTCGAGGGTTGGCTGAAGAAGTAA
Upstream 100 bases:
>100_bases CGTATTGGAAGCCACTGCGCCGCTACGGAAAATAGGCTGAACTTGTAACGGGCACGATCTCTCTCAATAACTACGCACAC CTGTTTATAAGGAAAATACC
Downstream 100 bases:
>100_bases AGCCTTGCCTGTCGATTGATTCAGGGCGTCGACTCTTCACCGTTGGCGCTGTTGAACAGCCGACGCCGGGAACGATCCGC GGCGGCTGTTCGTCTGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; H-NS Family Protein MvaT; Regulatory Protein
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSKLAEYRQLEKHLAEQLQALETMKGDQGLKKEIEFETKLRKLLEHYGFSLKHIINLLDPQTSSRGQTVEKPAGKRKPRE LKVYKNPKTGEVIETKGGNHKILKEWKAEHGSDVVEGWLKK
Sequences:
>Translated_121_residues MSKLAEYRQLEKHLAEQLQALETMKGDQGLKKEIEFETKLRKLLEHYGFSLKHIINLLDPQTSSRGQTVEKPAGKRKPRE LKVYKNPKTGEVIETKGGNHKILKEWKAEHGSDVVEGWLKK >Mature_120_residues SKLAEYRQLEKHLAEQLQALETMKGDQGLKKEIEFETKLRKLLEHYGFSLKHIINLLDPQTSSRGQTVEKPAGKRKPREL KVYKNPKTGEVIETKGGNHKILKEWKAEHGSDVVEGWLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13975; Mature: 13844
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLAEYRQLEKHLAEQLQALETMKGDQGLKKEIEFETKLRKLLEHYGFSLKHIINLLDP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC QTSSRGQTVEKPAGKRKPRELKVYKNPKTGEVIETKGGNHKILKEWKAEHGSDVVEGWLK CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHC K C >Mature Secondary Structure SKLAEYRQLEKHLAEQLQALETMKGDQGLKKEIEFETKLRKLLEHYGFSLKHIINLLDP CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC QTSSRGQTVEKPAGKRKPRELKVYKNPKTGEVIETKGGNHKILKEWKAEHGSDVVEGWLK CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA