Click here to switch to the map view.

The map label for this gene is 66043384

Identifier: 66043384

GI number: 66043384

Start: 123930

End: 124664

Strand: Reverse

Name: 66043384

Synonym: Psyr_0113

Alternate gene names: NA

Gene position: 124664-123930 (Counterclockwise)

Preceding gene: 66043387

Following gene: 66043383

Centisome position: 2.05

GC content: 47.76

Gene sequence:

>735_bases
ATGGATGTGGTGAGGGAAATTCTTCAAAACAAGGTAATGCGGATAAAGGTGTATGTGTGGCATCATAAAGCCATTAATCA
TGCACCGAGACTGAAGATGGAACTGATAAGTCAAGAAAAGATAATGCAAGTCCTCGACTGGGCTTACGAGAGATCTGTGA
ATGGATTCTCTGGTCTTGATTCCGCTGAGGAGCTTGCAGCCAGCTACGCCGGGAAAGACAGCTCTGCCTACGATCAAGCT
AATTCACTGATTCGTTGGCAAAACACCAAGTCCGCAACTTCAGGCTTTATTACCGGCCTGGGTGGATTGATCACGCTGCC
CATCGCGTTGCCCGCCAATATCACGAGTGTGCTTTTCGTACAAATTCGCATGATTGCCGCTATCGCCCATTTGGGCGGCT
ACGACGTCAGGGATGACAAGGTAAAGACTTTGGTTTTCGCCTGCCTCACAGCAAACTCTGCCAAAGAAGTGTTGAAAGAC
ATCGGTATTGCCGTCGGTAACAAGCTGGCGATGAACGCCGTGAAGTCGATTTCCGGAAAAACGCTTATAGAAATAAACAA
AAAGGTGGGCTTCAAACTGTTTACCAAGTTTGGTGAAAAAGGCGTTATCAATCTTGGTAAAGCCGTGCCCCTGCTGGGTG
GCTTGATTGGTGGAAGTTTCGATGCCTACACGACCAACACCATCGGTAATGTAGCGCGCGATACATTTACACCAAAAGAA
GTCGCAGCGGTATAA

Upstream 100 bases:

>100_bases
AAGAGTAAATTGAAAGAGGCGGACGCCCAAGGCACATCAGGTTTCGGTGGACATCGAATGCGTTGGCCGCAGAGCCCATT
GTTCCTTGACACAGTGGCGG

Downstream 100 bases:

>100_bases
CGTCCCGCACGCGTTATGGGTAGGCGGATTTACCTGCGGCCGGAGCTTCAGCTCCATTGCCACGGGCCGGCTTTCGATTA
AGAAAATCTGCCCCTTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MDVVREILQNKVMRIKVYVWHHKAINHAPRLKMELISQEKIMQVLDWAYERSVNGFSGLDSAEELAASYAGKDSSAYDQA
NSLIRWQNTKSATSGFITGLGGLITLPIALPANITSVLFVQIRMIAAIAHLGGYDVRDDKVKTLVFACLTANSAKEVLKD
IGIAVGNKLAMNAVKSISGKTLIEINKKVGFKLFTKFGEKGVINLGKAVPLLGGLIGGSFDAYTTNTIGNVARDTFTPKE
VAAV

Sequences:

>Translated_244_residues
MDVVREILQNKVMRIKVYVWHHKAINHAPRLKMELISQEKIMQVLDWAYERSVNGFSGLDSAEELAASYAGKDSSAYDQA
NSLIRWQNTKSATSGFITGLGGLITLPIALPANITSVLFVQIRMIAAIAHLGGYDVRDDKVKTLVFACLTANSAKEVLKD
IGIAVGNKLAMNAVKSISGKTLIEINKKVGFKLFTKFGEKGVINLGKAVPLLGGLIGGSFDAYTTNTIGNVARDTFTPKE
VAAV
>Mature_244_residues
MDVVREILQNKVMRIKVYVWHHKAINHAPRLKMELISQEKIMQVLDWAYERSVNGFSGLDSAEELAASYAGKDSSAYDQA
NSLIRWQNTKSATSGFITGLGGLITLPIALPANITSVLFVQIRMIAAIAHLGGYDVRDDKVKTLVFACLTANSAKEVLKD
IGIAVGNKLAMNAVKSISGKTLIEINKKVGFKLFTKFGEKGVINLGKAVPLLGGLIGGSFDAYTTNTIGNVARDTFTPKE
VAAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26384; Mature: 26384

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVREILQNKVMRIKVYVWHHKAINHAPRLKMELISQEKIMQVLDWAYERSVNGFSGLD
CHHHHHHHHCCEEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SAEELAASYAGKDSSAYDQANSLIRWQNTKSATSGFITGLGGLITLPIALPANITSVLFV
HHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHHHHCCHHHEECHHCCCHHHHHHHH
QIRMIAAIAHLGGYDVRDDKVKTLVFACLTANSAKEVLKDIGIAVGNKLAMNAVKSISGK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
TLIEINKKVGFKLFTKFGEKGVINLGKAVPLLGGLIGGSFDAYTTNTIGNVARDTFTPKE
EEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCHHH
VAAV
HHCC
>Mature Secondary Structure
MDVVREILQNKVMRIKVYVWHHKAINHAPRLKMELISQEKIMQVLDWAYERSVNGFSGLD
CHHHHHHHHCCEEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SAEELAASYAGKDSSAYDQANSLIRWQNTKSATSGFITGLGGLITLPIALPANITSVLFV
HHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHHHHCCHHHEECHHCCCHHHHHHHH
QIRMIAAIAHLGGYDVRDDKVKTLVFACLTANSAKEVLKDIGIAVGNKLAMNAVKSISGK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
TLIEINKKVGFKLFTKFGEKGVINLGKAVPLLGGLIGGSFDAYTTNTIGNVARDTFTPKE
EEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCHHH
VAAV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA