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The map label for this gene is 66043358

Identifier: 66043358

GI number: 66043358

Start: 93880

End: 95064

Strand: Direct

Name: 66043358

Synonym: Psyr_0087

Alternate gene names: NA

Gene position: 93880-95064 (Clockwise)

Preceding gene: 66043351

Following gene: 66043359

Centisome position: 1.54

GC content: 59.75

Gene sequence:

>1185_bases
ATGTTGTACAACGGTTTGCTCGACCTTTCCGTCTGGCAGTTAATAGCGGTCACGCTGGTCATGACCCATATAACGATCAT
TGGCGTCACGGTCTATCTGCACCGCTATTCAGCCCACCGCTCACTTGAGCTCAACGCGGGTCTGAAACACTTCTTCCGCT
TCTGGCTGTGGCTGACCACTGCCCAGAACACTCGCGAGTGGACAGCCATCCACCGCAAACACCACGCAAAATGCGAAACT
GTCGATGACCCGCACAGCCCGGTCGTCAAGGGTCTGTCCACCGTGCTGCGCAAGGGCGCCGAGCTGTACCGCGAGGAAGC
GCAGAACCAGGACACCCTGCGTATCTACGGCAAGAACTGCCCGGAAGACTGGATCGAGCGCAATCTGTATTCGCGCTACA
AGCTGCTGGGCATCGCGCTGATGGCGGTGATCGATGTGGCGCTGTTCGGTGTCCTCGGTATCACGGTCTGGGCCGTGCAG
ATGATGTGGATTCCCTTCTGGGCTGCCGGCGTGGTCAACGGTCTGGGTCATGCGGTCGGCTATCGCAACTTCGAATGCCG
TGATGCGGCCACCAATCTGGTGCCGTGGGGCATCGTGATCGGCGGCGAAGAGCTGCACAACAATCACCACACCTATCCCA
ACTCGGCCAAGCTGTCGGTCAAACCCTGGGAATTCGACATGGGCTGGGCGTGGATCAAGGTCTTCAGCTTCCTGCGTCTG
GCCAAGGTCCAGCGGGTCGCGCCTATTGCCCATCGGGTCGAAGGCAAGGGCCACATGGACATGGACACCGCGATGGCGAT
CCTCAACAACCGTTTCCAGATCATGGCGCAGTACCGCAAGCTGGTGATCGCGCCGCTGGTTGCCCAGGAACTGGCCAAGG
CCGACGAGTCGGTGCGTCATCAGTTCCGCCGCGCCAAGCGCCTGCTGTCGCGTGAGACCAGCCTGCTCGATGACAAGCAT
CACCTGCGTATCCAGACCATGCTGGAACACAGCCATGCGCTGAAGGTGATCTACGAAAAACGCCTGGCCTTGCAGCAGAT
CTGGGTCAAGACCAGCAGCAACGGCCATGACATGCTTTCGGCCATGAAAGAGTGGATTCACGAGGCCGAAGCCAGTGGTA
TTCAGTCCCTGCGCGAGTTCGCCGACCAGCTGAAAACCTACTCGCTACGCCCCGCCCACGCTTGA

Upstream 100 bases:

>100_bases
GACGCTTATGTGCAAGGGTGACTGGTTTTCTGAGCAATGTCAGTGATAATGCTGTTGCGACTTTTTTCTTCACAGGTTTT
CTACGAGGGCCAAACAGCCT

Downstream 100 bases:

>100_bases
ACCGTTGATCGGTGCGCCTTCCCTTGGCGCGCCGGTCCCGGAACTTATCCCCTCTCCCTCTATCTCATCAACTTTCCCGC
CAATCGGGACAGGGCGCCTC

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Subfamily; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Delta-9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MLYNGLLDLSVWQLIAVTLVMTHITIIGVTVYLHRYSAHRSLELNAGLKHFFRFWLWLTTAQNTREWTAIHRKHHAKCET
VDDPHSPVVKGLSTVLRKGAELYREEAQNQDTLRIYGKNCPEDWIERNLYSRYKLLGIALMAVIDVALFGVLGITVWAVQ
MMWIPFWAAGVVNGLGHAVGYRNFECRDAATNLVPWGIVIGGEELHNNHHTYPNSAKLSVKPWEFDMGWAWIKVFSFLRL
AKVQRVAPIAHRVEGKGHMDMDTAMAILNNRFQIMAQYRKLVIAPLVAQELAKADESVRHQFRRAKRLLSRETSLLDDKH
HLRIQTMLEHSHALKVIYEKRLALQQIWVKTSSNGHDMLSAMKEWIHEAEASGIQSLREFADQLKTYSLRPAHA

Sequences:

>Translated_394_residues
MLYNGLLDLSVWQLIAVTLVMTHITIIGVTVYLHRYSAHRSLELNAGLKHFFRFWLWLTTAQNTREWTAIHRKHHAKCET
VDDPHSPVVKGLSTVLRKGAELYREEAQNQDTLRIYGKNCPEDWIERNLYSRYKLLGIALMAVIDVALFGVLGITVWAVQ
MMWIPFWAAGVVNGLGHAVGYRNFECRDAATNLVPWGIVIGGEELHNNHHTYPNSAKLSVKPWEFDMGWAWIKVFSFLRL
AKVQRVAPIAHRVEGKGHMDMDTAMAILNNRFQIMAQYRKLVIAPLVAQELAKADESVRHQFRRAKRLLSRETSLLDDKH
HLRIQTMLEHSHALKVIYEKRLALQQIWVKTSSNGHDMLSAMKEWIHEAEASGIQSLREFADQLKTYSLRPAHA
>Mature_394_residues
MLYNGLLDLSVWQLIAVTLVMTHITIIGVTVYLHRYSAHRSLELNAGLKHFFRFWLWLTTAQNTREWTAIHRKHHAKCET
VDDPHSPVVKGLSTVLRKGAELYREEAQNQDTLRIYGKNCPEDWIERNLYSRYKLLGIALMAVIDVALFGVLGITVWAVQ
MMWIPFWAAGVVNGLGHAVGYRNFECRDAATNLVPWGIVIGGEELHNNHHTYPNSAKLSVKPWEFDMGWAWIKVFSFLRL
AKVQRVAPIAHRVEGKGHMDMDTAMAILNNRFQIMAQYRKLVIAPLVAQELAKADESVRHQFRRAKRLLSRETSLLDDKH
HLRIQTMLEHSHALKVIYEKRLALQQIWVKTSSNGHDMLSAMKEWIHEAEASGIQSLREFADQLKTYSLRPAHA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45350; Mature: 45350

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYNGLLDLSVWQLIAVTLVMTHITIIGVTVYLHRYSAHRSLELNAGLKHFFRFWLWLTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
AQNTREWTAIHRKHHAKCETVDDPHSPVVKGLSTVLRKGAELYREEAQNQDTLRIYGKNC
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
PEDWIERNLYSRYKLLGIALMAVIDVALFGVLGITVWAVQMMWIPFWAAGVVNGLGHAVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YRNFECRDAATNLVPWGIVIGGEELHNNHHTYPNSAKLSVKPWEFDMGWAWIKVFSFLRL
CCCCCHHHHHCCCCCCEEEECCHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
AKVQRVAPIAHRVEGKGHMDMDTAMAILNNRFQIMAQYRKLVIAPLVAQELAKADESVRH
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFRRAKRLLSRETSLLDDKHHLRIQTMLEHSHALKVIYEKRLALQQIWVKTSSNGHDMLS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AMKEWIHEAEASGIQSLREFADQLKTYSLRPAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLYNGLLDLSVWQLIAVTLVMTHITIIGVTVYLHRYSAHRSLELNAGLKHFFRFWLWLTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
AQNTREWTAIHRKHHAKCETVDDPHSPVVKGLSTVLRKGAELYREEAQNQDTLRIYGKNC
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
PEDWIERNLYSRYKLLGIALMAVIDVALFGVLGITVWAVQMMWIPFWAAGVVNGLGHAVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YRNFECRDAATNLVPWGIVIGGEELHNNHHTYPNSAKLSVKPWEFDMGWAWIKVFSFLRL
CCCCCHHHHHCCCCCCEEEECCHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
AKVQRVAPIAHRVEGKGHMDMDTAMAILNNRFQIMAQYRKLVIAPLVAQELAKADESVRH
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFRRAKRLLSRETSLLDDKHHLRIQTMLEHSHALKVIYEKRLALQQIWVKTSSNGHDMLS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AMKEWIHEAEASGIQSLREFADQLKTYSLRPAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA