| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cysW [H]
Identifier: 66043353
GI number: 66043353
Start: 88464
End: 89336
Strand: Reverse
Name: cysW [H]
Synonym: Psyr_0082
Alternate gene names: 66043353
Gene position: 89336-88464 (Counterclockwise)
Preceding gene: 66043354
Following gene: 66043352
Centisome position: 1.47
GC content: 61.86
Gene sequence:
>873_bases ATGTCTTATTCATCTGTCTCGGCCGCCGCCTCTGCCAACGCCGCCCGTCGTGGCAGCGCGGTATCGCGACGCATCCTGAT CGGCCTGTGCTGGCTGGTATTCGTCCTGTTTCTGGGCCTGCCGCTGTTCATCGTGGTGTCCCAGGGCCTGAAAAACGGTC TGGGCGCGTTCTTTATCGCAATCCTCGAACCGGACGCGCTGTCGGCGCTGAAGCTGACGGTCATAGCGGTATTGATCTCG GTGCCGCTAAACCTGGTGTTCGGCGTCAGCGCCGCGTGGTGTGTGAGCAAATACTCGTTCCGCGGCAAGAGCATTCTGGT CACGCTGATCGACCTGCCGTTCTCGGTGTCGCCGGTCATCGCCGGTCTGGTCTACGTGCTGATGTTCGGTGCACAGGGGC TGTTCGGGCCGTGGCTGCAGGATCACGACATCCAGATCGTCTTTGCCCTGCCGGGCATCGTGCTGGCGACCATCTTCGTC ACCGTCCCCTTCGTTGCCCGTGAGCTGATCCCGCTGATGCAGGAGCAGGGCACTCAGGAAGAAGAAGCCGCACGGCTGCT GGGCGCCAATGGCTGGCAGATGTTCTGGCACGTCACGGTGCCGAACATCAAATGGGGCCTGATCTACGGCGTGGTGCTGT GTACGGCGCGGGCGATGGGTGAGTTTGGCGCGGTGTCGGTGGTGTCCGGGCACATTCGCGGCGTCACCAACACCCTGCCG CTGCACGTCGAAATCCTCTACAACGAATACAACCACGTTGCCGCCTTTGCCGTGGCGAGCCTGTTGCTGATCCTGGCGCT GTTCATCCTGCTGCTCAAGCAGTGGAGCGAATCGCGCATTAACCGTCTGCGCCATAACGCGGCGGAGGAATAA
Upstream 100 bases:
>100_bases GCTATCGGCGTGATGATGCTGGTGGTGTCCTTCATTCTGCTGCTGCTGATCAACCTGCTGCAGCGGCGCATTGAAACCCC ATCCTGAGGAGGCGCAGAAC
Downstream 100 bases:
>100_bases TCATGTCGATCGAAGTCCGTAACGTCAGCAAGAACTTCAATGCCTTCAAGGCCCTGAACAACATCAGTCTGGACATCCAG AGTGGCGAGCTGGTGGCTTT
Product: binding-protein dependent transport system inner membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSYSSVSAAASANAARRGSAVSRRILIGLCWLVFVLFLGLPLFIVVSQGLKNGLGAFFIAILEPDALSALKLTVIAVLIS VPLNLVFGVSAAWCVSKYSFRGKSILVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFV TVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSESRINRLRHNAAEE
Sequences:
>Translated_290_residues MSYSSVSAAASANAARRGSAVSRRILIGLCWLVFVLFLGLPLFIVVSQGLKNGLGAFFIAILEPDALSALKLTVIAVLIS VPLNLVFGVSAAWCVSKYSFRGKSILVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFV TVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSESRINRLRHNAAEE >Mature_289_residues SYSSVSAAASANAARRGSAVSRRILIGLCWLVFVLFLGLPLFIVVSQGLKNGLGAFFIAILEPDALSALKLTVIAVLISV PLNLVFGVSAAWCVSKYSFRGKSILVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFVT VPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLPL HVEILYNEYNHVAAFAVASLLLILALFILLLKQWSESRINRLRHNAAEE
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=265, Percent_Identity=52.0754716981132, Blast_Score=278, Evalue=3e-76, Organism=Escherichia coli, GI1788764, Length=222, Percent_Identity=36.036036036036, Blast_Score=151, Evalue=4e-38, Organism=Escherichia coli, GI1786980, Length=222, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31502; Mature: 31371
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00656 GLYCOSYL_HYDROL_F6_2 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSSVSAAASANAARRGSAVSRRILIGLCWLVFVLFLGLPLFIVVSQGLKNGLGAFFIA CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHE ILEPDALSALKLTVIAVLISVPLNLVFGVSAAWCVSKYSFRGKSILVTLIDLPFSVSPVI EECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHH AGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFVTVPFVARELIPLMQEQGTQE HHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSESRINRLRHNAAEE EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SYSSVSAAASANAARRGSAVSRRILIGLCWLVFVLFLGLPLFIVVSQGLKNGLGAFFIA CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHE ILEPDALSALKLTVIAVLISVPLNLVFGVSAAWCVSKYSFRGKSILVTLIDLPFSVSPVI EECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHH AGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFVTVPFVARELIPLMQEQGTQE HHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSESRINRLRHNAAEE EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]