| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043338
Identifier: 66043338
GI number: 66043338
Start: 67651
End: 68844
Strand: Reverse
Name: 66043338
Synonym: Psyr_0067
Alternate gene names: NA
Gene position: 68844-67651 (Counterclockwise)
Preceding gene: 66043339
Following gene: 66043335
Centisome position: 1.13
GC content: 61.56
Gene sequence:
>1194_bases ATGCTTGACGTGAATCGCTATGTGACGCCCGTGCTCAACTTGATGCAGCGCTATCCGGGGCTCATTGCAGCGTTTGGTTT CGTTTCCGGTATCGCCAGTTTCATTCTGGTCGATCGCCAGGCAGGGCTGGCAACCTGGATCGCGGTGGTGATGCTGATCA GCTGGCTGTGGCTGATGGTCGAAAACACCATGGTCGGGTTGCTCAACAAGGCACTGGGCCGCGAGATCCCGCAGGGTTTG TTGCGCTACGGCACGCAGATGATTCATCAGGAAAGCCTGTTCTTCGTGCTGCCGTTCTTTTTCATCACCACCACCTGGAA CAGTGGTCAGGCGGTGTTCACTGCGGTGCTCGGGGCCGCCGGGCTGATCTCGATCATCGACCCTCTCTACTACAAATGGC TGGCGCCCAGGCGCTGGCTGTTCATGACGCTGCACACACTGACGCTGTTCGCGGCACTGCTGACCGCGCTGCCGATCATC CTGCACCTGACCACCGCCGAGAGTTACAAACTGGCCCTGGGCGTGGCGATGCTACTGTCGGCGCCCAGCCTGATGTCGAA TTTCCCGCTCAACACCTGGCGCAGCGCACTGGCCGTGATCAGCATCATCCTGGCCATCGGCGCGGCGGGCTGGTTGCTGC GCTCCTGGGTGCCGCCTGCGACGCTGTGGTTGACCGAAGTGGCGGTGAGCCCGGACTTCGATAACAAAAACCGTACGCCG GGCGACAGTATTTCGCTGATCAGCGCCAGGCAGCTGCGCAACGGCGGCCTGTATGCGTACACCGCCATCAATGCGCCGCG TGGCCTGGACGAGCGTATCTACCATGTGTGGTGGCATGAAGGCGAAGAGATGGACCGCATCGCGCTGGATATCCACGGCG GCCGCAAGGAAGGCTATCGCGCCTGGACGCGCAAGCAGAACTTCCCGGAGGACGTGACAGGACGCTGGCAGGTGAGGGTG CTGACCGAAGACGGCCAGATGATAGGCGTGCTGCGTTTTGTGGTCACTGACGATGATCAACCGGCAGTGAAGCGGCCTAC CGGACGGATAATCAAGCTCAAGCCAGGCGGCGACTCGGCCGAAGAGGCTACACCTGAATCAGCCCCTGCAACTGAGCCGA AACAGGAGAAGCAGGAGGCTGCGCCTGCAGAGCCAGCCCCCGCTGAATCTGCGCCTCAGGTTCCGGCGCAGTAA
Upstream 100 bases:
>100_bases ATAGAATCCTGACGCCGAACTGCACCCAGGGTGCAGGCTCCGCGCTGCGTTTGTTACGCAGCGCGTTTTTTTGTATGAAC AGAACCGAGTGACCCCTCCG
Downstream 100 bases:
>100_bases TGTTTCAGGAGGCGGTCGCGCCGAAGAACCAGTAGCAGACGAAGATCGCGGCCACGACGCCGGAAAACTCGGCCAGCAGC GCGCAGCCCACAGCATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MLDVNRYVTPVLNLMQRYPGLIAAFGFVSGIASFILVDRQAGLATWIAVVMLISWLWLMVENTMVGLLNKALGREIPQGL LRYGTQMIHQESLFFVLPFFFITTTWNSGQAVFTAVLGAAGLISIIDPLYYKWLAPRRWLFMTLHTLTLFAALLTALPII LHLTTAESYKLALGVAMLLSAPSLMSNFPLNTWRSALAVISIILAIGAAGWLLRSWVPPATLWLTEVAVSPDFDNKNRTP GDSISLISARQLRNGGLYAYTAINAPRGLDERIYHVWWHEGEEMDRIALDIHGGRKEGYRAWTRKQNFPEDVTGRWQVRV LTEDGQMIGVLRFVVTDDDQPAVKRPTGRIIKLKPGGDSAEEATPESAPATEPKQEKQEAAPAEPAPAESAPQVPAQ
Sequences:
>Translated_397_residues MLDVNRYVTPVLNLMQRYPGLIAAFGFVSGIASFILVDRQAGLATWIAVVMLISWLWLMVENTMVGLLNKALGREIPQGL LRYGTQMIHQESLFFVLPFFFITTTWNSGQAVFTAVLGAAGLISIIDPLYYKWLAPRRWLFMTLHTLTLFAALLTALPII LHLTTAESYKLALGVAMLLSAPSLMSNFPLNTWRSALAVISIILAIGAAGWLLRSWVPPATLWLTEVAVSPDFDNKNRTP GDSISLISARQLRNGGLYAYTAINAPRGLDERIYHVWWHEGEEMDRIALDIHGGRKEGYRAWTRKQNFPEDVTGRWQVRV LTEDGQMIGVLRFVVTDDDQPAVKRPTGRIIKLKPGGDSAEEATPESAPATEPKQEKQEAAPAEPAPAESAPQVPAQ >Mature_397_residues MLDVNRYVTPVLNLMQRYPGLIAAFGFVSGIASFILVDRQAGLATWIAVVMLISWLWLMVENTMVGLLNKALGREIPQGL LRYGTQMIHQESLFFVLPFFFITTTWNSGQAVFTAVLGAAGLISIIDPLYYKWLAPRRWLFMTLHTLTLFAALLTALPII LHLTTAESYKLALGVAMLLSAPSLMSNFPLNTWRSALAVISIILAIGAAGWLLRSWVPPATLWLTEVAVSPDFDNKNRTP GDSISLISARQLRNGGLYAYTAINAPRGLDERIYHVWWHEGEEMDRIALDIHGGRKEGYRAWTRKQNFPEDVTGRWQVRV LTEDGQMIGVLRFVVTDDDQPAVKRPTGRIIKLKPGGDSAEEATPESAPATEPKQEKQEAAPAEPAPAESAPQVPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44018; Mature: 44018
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVNRYVTPVLNLMQRYPGLIAAFGFVSGIASFILVDRQAGLATWIAVVMLISWLWLMV CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ENTMVGLLNKALGREIPQGLLRYGTQMIHQESLFFVLPFFFITTTWNSGQAVFTAVLGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GLISIIDPLYYKWLAPRRWLFMTLHTLTLFAALLTALPIILHLTTAESYKLALGVAMLLS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH APSLMSNFPLNTWRSALAVISIILAIGAAGWLLRSWVPPATLWLTEVAVSPDFDNKNRTP CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC GDSISLISARQLRNGGLYAYTAINAPRGLDERIYHVWWHEGEEMDRIALDIHGGRKEGYR CCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHEEHHCCCCCCCCEEEEEECCCCCHHHH AWTRKQNFPEDVTGRWQVRVLTEDGQMIGVLRFVVTDDDQPAVKRPTGRIIKLKPGGDSA HHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCH EEATPESAPATEPKQEKQEAAPAEPAPAESAPQVPAQ HHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDVNRYVTPVLNLMQRYPGLIAAFGFVSGIASFILVDRQAGLATWIAVVMLISWLWLMV CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ENTMVGLLNKALGREIPQGLLRYGTQMIHQESLFFVLPFFFITTTWNSGQAVFTAVLGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GLISIIDPLYYKWLAPRRWLFMTLHTLTLFAALLTALPIILHLTTAESYKLALGVAMLLS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH APSLMSNFPLNTWRSALAVISIILAIGAAGWLLRSWVPPATLWLTEVAVSPDFDNKNRTP CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC GDSISLISARQLRNGGLYAYTAINAPRGLDERIYHVWWHEGEEMDRIALDIHGGRKEGYR CCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHEEHHCCCCCCCCEEEEEECCCCCHHHH AWTRKQNFPEDVTGRWQVRVLTEDGQMIGVLRFVVTDDDQPAVKRPTGRIIKLKPGGDSA HHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCH EEATPESAPATEPKQEKQEAAPAEPAPAESAPQVPAQ HHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA