Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 62391941

GI number: 62391941

Start: 3276941

End: 3278080

Strand: Reverse

Name: parB [H]

Synonym: cg3426

Alternate gene names: 62391941

Gene position: 3278080-3276941 (Counterclockwise)

Preceding gene: 62391942

Following gene: 62391940

Centisome position: 99.86

GC content: 59.39

Gene sequence:

>1140_bases
ATGGCTCAGAACAAGGGTTCCGACAAGTCCCAGACGGAAAAGCGTAAGGGCGGTCTGGGGCGCGGTCTGGCCGCACTTAT
TCCCTCAGGACCAAGTAATTCCCCAGGTCTTGGTGGCGGTGCGGCTGACATCATTTTGGGCGGTACCGTGGGTGCGCGTA
CTGCTGCAGCTCCCAAGCGTGAGTCCACACCAGCAGCTCCTGCACCTGAGGCTCCTGCGCAGGCCGCTCCACAACACACT
GAGGCCACAAAGCCAGAGGTAGTTCCAGAGCCAGCAGCTCCTGCTCCAACGCAGTCAGCACAGCAGGAAGCGCCGCAGGC
ACAGCCAGCACAGCAGTCTGAGTTCGGCGCATCCTACCTTGAGATCCCGATCGAGCAGATCCGCCCCAACCCGCAGCAGC
CTCGCCATGAGTTTGATCCGCAGGCACTTGACGAGTTGGTGCATTCGATCAGCGAGTTCGGCCTCATGCAGCCGATCGTG
GTGCGCAGGTCCGAGGATGGCTATGAGCTCATCATGGGTGAGCGTCGTTGGCGTGCATCCAAGCGAGCTGGCCTTGAGGT
TATCCCGGCGATTGTCCGTGAAACTGAAGACAGCGCGATGCTGCGCGACGCCCTTTTGGAAAATATCCACAGGGTGCAGC
TGAATCCTTTGGAAGAGGCAGCCGCCTACCAGCAGTTGCTGGAGGAGTTCGGTGTCACCCAGGCAGAGCTGGCCGATAAG
CTGGGCCGTTCCCGTCCGGTAATCACCAATATGATTCGTCTGCTGGGCCTTCCAGTCAACGTGCAGACCAAGGTGGCAGC
CGGTGTGCTGTCTGCAGGCCATGCACGCGCATTGCTGGGGCTCAAGGCCGGCGAGGATGCTCAGGACACCCTGGCGACCC
GAATCATCGCTGAGGGCCTGTCTGTGCGTGCTACTGAGGAATTGGTGCTGCTGCACAACCGTGGTGATCAGGATGAGGAG
AAGAAGCCACGCGAAAAGGCTGCAACTCCTGAGGTCTTTACCCGTGCGGCTGAGTCCTTGGCGGATAATTTGGATACCAA
GGTCTCGGTGATGATGGGTAAGAAGAAGGGCAAGCTCGTGGTGGAATTCGGCGACAAGGATGATTTCGAGCGCATCATGT
CCTTGATCCAGGGCCAATAA

Upstream 100 bases:

>100_bases
GCGATGAATCCGGTCCGATCGGCCTAAAACCTGCGAAATAGCAGTAAACTTCTTTGAATACGTTAATTGTTGTGCTGTAC
GAAAGGTGCGTCTAAGAGCG

Downstream 100 bases:

>100_bases
TTTTAAGTTTGGCGCCATGCTCCAGGCTTCCCTTTTCCCGATCGTGCAGGAACACATAGATTTCCTGCACCCCCAGGCCC
GCAAGTCGGTGTTTTGGGAG

Product: transcriptional regulator involved in chromosome patitioning

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKRESTPAAPAPEAPAQAAPQHT
EATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQPIV
VRRSEDGYELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQAELADK
LGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRGDQDEE
KKPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLIQGQ

Sequences:

>Translated_379_residues
MAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKRESTPAAPAPEAPAQAAPQHT
EATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQPIV
VRRSEDGYELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQAELADK
LGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRGDQDEE
KKPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLIQGQ
>Mature_378_residues
AQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKRESTPAAPAPEAPAQAAPQHTE
ATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQPIVV
RRSEDGYELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQAELADKL
GRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRGDQDEEK
KPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLIQGQ

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 40636; Mature: 40505

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKR
CCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCC
ESTPAAPAPEAPAQAAPQHTEATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHH
EIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQPIVVRRSEDGYELIMGERRWRAS
CCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHCCHHHHHH
KRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQAELADK
HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGL
HCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCC
SVRATEELVLLHNRGDQDEEKKPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLV
CCCCCCCEEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEE
VEFGDKDDFERIMSLIQGQ
EEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKR
CCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCC
ESTPAAPAPEAPAQAAPQHTEATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHH
EIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQPIVVRRSEDGYELIMGERRWRAS
CCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHCCHHHHHH
KRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQAELADK
HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGL
HCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCC
SVRATEELVLLHNRGDQDEEKKPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLV
CCCCCCCEEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEE
VEFGDKDDFERIMSLIQGQ
EEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]