Definition Corynebacterium glutamicum ATCC 13032, complete genome.
Accession NC_006958
Length 3,282,708

Click here to switch to the map view.

The map label for this gene is tcbF [H]

Identifier: 62391903

GI number: 62391903

Start: 3230708

End: 3231799

Strand: Reverse

Name: tcbF [H]

Synonym: cg3386

Alternate gene names: 62391903

Gene position: 3231799-3230708 (Counterclockwise)

Preceding gene: 62391904

Following gene: 62391902

Centisome position: 98.45

GC content: 57.05

Gene sequence:

>1092_bases
GTGAACAACTCACTCGCATTCAACCACGACACCCTCCCACAGAAAGTCATGTTTGGATATGGCAAGTCCAGTGCATTCTT
AAAGCAGGAAGTTGAACGCCGCGGCTCAGCCAAGGTCATGGTCATTGCGGGTGAACGAGAAATGTCGATCGCCCATAAGG
TGGCCTCAGAAATTGAGGTGGCGATCTGGCACGACGAAGTTGTCATGCACGTGCCCATCGAAGTAGCCGAACGTGCGCGT
GCAGTGGCAACCGACAATGAGATTGATCTGCTGGTGTGTGTTGGCGGCGGATCCACCATAGGTTTGGCCAAAGCAATTGC
CATGACCACTGCCCTGCCCATCGTCGCGATCCCCACCACCTACGCAGGATCGGAAGCAACCAACGTGTGGGGTCTGACGG
AAGCAGCGCGCAAAACAACCGGTGTTGATCTGAAGGTGCTCCCCGAAACAGTCATTTACGATTCCGAACTCACCATGTCG
CTTCCAGTGGAGATGTCCGTGGCATCCGGACTCAACGGCCTGGCGCACTGCATTGATTCTTTGTGGGGACCCAACGCCGA
TCCCATCAACGCAGTGCTTGCAGCCGAAGGAATCCGCGCACTCAACCAGGGACTGCCGAAAATTGTTGCGAACCCGCACA
GCATCGAAGGACGCGACGAAGCCCTCTACGGCGCCTACCTCGCAGCAGTATCCTTCGCCTCCGCAGGCTCCGGACTACAC
CACAAAATCTGCCACACCTTGGGAGGCACCTTCAACCTCCCCCACGCCCAAACCCACGCAACCGTGCTGCCGTATGTTTT
GGCATTCAACGCAGGCGACGCACCAGAAGCTGAACGCCGCGCAGCCGCAGCCTTTGGAACTGACACCGCACTAGAAGGCC
TGCAACGCCTCCGCTTGTCAGTCAACGCACCGAAACGACTTTCCGACTACGGCTTCGAGGCTTCAGGAATTGCTGAGGCA
GTGGACGTCACGTTGGAGAAAGTTCCCGCCAACAATCCTCGCCCAGTGACCCGGGAAAACCTCAGCAGATTGCTCGAAGC
AGCACTCAACGGTGAGGATCCGGCAGTTCTTAGCGCAGTACTCAGTAACTAA

Upstream 100 bases:

>100_bases
AGCATTCACCGGCCAGATCTTCAAGAAGGCTTAAACCCCCTCCGATCTCTTTGGCTAGCACCTAACAAACCACCACACCT
TTTAGAAAGTGATTCTCGCT

Downstream 100 bases:

>100_bases
CCCGGCGATTTTTCAAGGAGAAAATCATGACAACCACCACCGCAGACCACAACATCAGCGCGCAGCAAAAGGCTGTTGAA
GAAAATCTGGTGAACCGTGT

Product: maleylacetate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR
AVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS
LPVEMSVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLSVNAPKRLSDYGFEASGIAEA
VDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN

Sequences:

>Translated_363_residues
MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR
AVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS
LPVEMSVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLSVNAPKRLSDYGFEASGIAEA
VDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN
>Mature_363_residues
MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR
AVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS
LPVEMSVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLSVNAPKRLSDYGFEASGIAEA
VDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN

Specific function: Fucose metabolism; fourth step. [C]

COG id: COG1454

COG function: function code C; Alcohol dehydrogenase, class IV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789163, Length=382, Percent_Identity=27.2251308900524, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI87082107, Length=291, Percent_Identity=29.2096219931272, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI48994951, Length=298, Percent_Identity=28.5234899328859, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787493, Length=417, Percent_Identity=23.021582733813, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17537053, Length=429, Percent_Identity=23.0769230769231, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321181, Length=298, Percent_Identity=27.5167785234899, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: =1.3.1.32 [H]

Molecular weight: Translated: 38299; Mature: 38299

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEV
CCCCEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEE
AIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTT
EEEECCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEECCC
YAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMSLPVEMSVASGLNGLAHCIDS
CCCCCCCCCCCHHHHHHHHCCCCEEECCHHEEECCCCEEECCEEEHHHHCCHHHHHHHHH
LWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH
HCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLS
HHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC
VNAPKRLSDYGFEASGIAEAVDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAV
CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LSN
HCC
>Mature Secondary Structure
MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEV
CCCCEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEE
AIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTT
EEEECCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEECCC
YAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMSLPVEMSVASGLNGLAHCIDS
CCCCCCCCCCCHHHHHHHHCCCCEEECCHHEEECCCCEEECCEEEHHHHCCHHHHHHHHH
LWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH
HCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLS
HHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC
VNAPKRLSDYGFEASGIAEAVDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAV
CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LSN
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]