| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is tcbF [H]
Identifier: 62391903
GI number: 62391903
Start: 3230708
End: 3231799
Strand: Reverse
Name: tcbF [H]
Synonym: cg3386
Alternate gene names: 62391903
Gene position: 3231799-3230708 (Counterclockwise)
Preceding gene: 62391904
Following gene: 62391902
Centisome position: 98.45
GC content: 57.05
Gene sequence:
>1092_bases GTGAACAACTCACTCGCATTCAACCACGACACCCTCCCACAGAAAGTCATGTTTGGATATGGCAAGTCCAGTGCATTCTT AAAGCAGGAAGTTGAACGCCGCGGCTCAGCCAAGGTCATGGTCATTGCGGGTGAACGAGAAATGTCGATCGCCCATAAGG TGGCCTCAGAAATTGAGGTGGCGATCTGGCACGACGAAGTTGTCATGCACGTGCCCATCGAAGTAGCCGAACGTGCGCGT GCAGTGGCAACCGACAATGAGATTGATCTGCTGGTGTGTGTTGGCGGCGGATCCACCATAGGTTTGGCCAAAGCAATTGC CATGACCACTGCCCTGCCCATCGTCGCGATCCCCACCACCTACGCAGGATCGGAAGCAACCAACGTGTGGGGTCTGACGG AAGCAGCGCGCAAAACAACCGGTGTTGATCTGAAGGTGCTCCCCGAAACAGTCATTTACGATTCCGAACTCACCATGTCG CTTCCAGTGGAGATGTCCGTGGCATCCGGACTCAACGGCCTGGCGCACTGCATTGATTCTTTGTGGGGACCCAACGCCGA TCCCATCAACGCAGTGCTTGCAGCCGAAGGAATCCGCGCACTCAACCAGGGACTGCCGAAAATTGTTGCGAACCCGCACA GCATCGAAGGACGCGACGAAGCCCTCTACGGCGCCTACCTCGCAGCAGTATCCTTCGCCTCCGCAGGCTCCGGACTACAC CACAAAATCTGCCACACCTTGGGAGGCACCTTCAACCTCCCCCACGCCCAAACCCACGCAACCGTGCTGCCGTATGTTTT GGCATTCAACGCAGGCGACGCACCAGAAGCTGAACGCCGCGCAGCCGCAGCCTTTGGAACTGACACCGCACTAGAAGGCC TGCAACGCCTCCGCTTGTCAGTCAACGCACCGAAACGACTTTCCGACTACGGCTTCGAGGCTTCAGGAATTGCTGAGGCA GTGGACGTCACGTTGGAGAAAGTTCCCGCCAACAATCCTCGCCCAGTGACCCGGGAAAACCTCAGCAGATTGCTCGAAGC AGCACTCAACGGTGAGGATCCGGCAGTTCTTAGCGCAGTACTCAGTAACTAA
Upstream 100 bases:
>100_bases AGCATTCACCGGCCAGATCTTCAAGAAGGCTTAAACCCCCTCCGATCTCTTTGGCTAGCACCTAACAAACCACCACACCT TTTAGAAAGTGATTCTCGCT
Downstream 100 bases:
>100_bases CCCGGCGATTTTTCAAGGAGAAAATCATGACAACCACCACCGCAGACCACAACATCAGCGCGCAGCAAAAGGCTGTTGAA GAAAATCTGGTGAACCGTGT
Product: maleylacetate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR AVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS LPVEMSVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLSVNAPKRLSDYGFEASGIAEA VDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN
Sequences:
>Translated_363_residues MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR AVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS LPVEMSVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLSVNAPKRLSDYGFEASGIAEA VDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN >Mature_363_residues MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERAR AVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTYAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMS LPVEMSVASGLNGLAHCIDSLWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLSVNAPKRLSDYGFEASGIAEA VDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAVLSN
Specific function: Fucose metabolism; fourth step. [C]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789163, Length=382, Percent_Identity=27.2251308900524, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI87082107, Length=291, Percent_Identity=29.2096219931272, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI48994951, Length=298, Percent_Identity=28.5234899328859, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787493, Length=417, Percent_Identity=23.021582733813, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17537053, Length=429, Percent_Identity=23.0769230769231, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321181, Length=298, Percent_Identity=27.5167785234899, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.3.1.32 [H]
Molecular weight: Translated: 38299; Mature: 38299
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEV CCCCEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEE AIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTT EEEECCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEECCC YAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMSLPVEMSVASGLNGLAHCIDS CCCCCCCCCCCHHHHHHHHCCCCEEECCHHEEECCCCEEECCEEEHHHHCCHHHHHHHHH LWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH HCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLS HHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC VNAPKRLSDYGFEASGIAEAVDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAV CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LSN HCC >Mature Secondary Structure MNNSLAFNHDTLPQKVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEV CCCCEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEE AIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTT EEEECCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEECCC YAGSEATNVWGLTEAARKTTGVDLKVLPETVIYDSELTMSLPVEMSVASGLNGLAHCIDS CCCCCCCCCCCHHHHHHHHCCCCEEECCHHEEECCCCEEECCEEEHHHHCCHHHHHHHHH LWGPNADPINAVLAAEGIRALNQGLPKIVANPHSIEGRDEALYGAYLAAVSFASAGSGLH HCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH HKICHTLGGTFNLPHAQTHATVLPYVLAFNAGDAPEAERRAAAAFGTDTALEGLQRLRLS HHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC VNAPKRLSDYGFEASGIAEAVDVTLEKVPANNPRPVTRENLSRLLEAALNGEDPAVLSAV CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LSN HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]