| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is rmpA [H]
Identifier: 62391885
GI number: 62391885
Start: 3215184
End: 3215996
Strand: Reverse
Name: rmpA [H]
Synonym: cg3366
Alternate gene names: 62391885
Gene position: 3215996-3215184 (Counterclockwise)
Preceding gene: 62391889
Following gene: 62391884
Centisome position: 97.97
GC content: 55.23
Gene sequence:
>813_bases ATGTTTGTACTCAAAGATCTGCTAAAGGCAGAACGCATAGAACTCGACCGCACGGTCACCGATTGGCGTGAAGGCATCCG CGCCGCAGGTGTACTCCTAGAAAAGACAAACAGCATTGATTCCGCCTACACCGATGCCATGATCGCCAGCGTGGAAGAAA AAGGCCCCTACATTGTGGTCGCTCCAGGTTTCGCTTTCGCGCACGCCCGCCCCAGCAGAGCAGTCCGCGAGACCGCTATG TCGTGGGTGCGCCTGGCCTCCCCTGTTTCCTTCGGTCACAGTAAGAATGATCCCGTCAATCTCATCGTTGCTCTCGCTGC CAAAGATGCCACCGCACATACCCAAGCGATGGCGGCATTGGCTAAAGCTTTAGGAAAATACCGAAAGGATCTCGACGAGG CACAAAGTCCCGAGGAGATCCAAGCAATCTTAGAGAAGGCAGCAGCGCCGGCGAAGCAGAAGGCTCCTGCTGTGGCTCCT GCTGTAACACCCACTGACGCTCCTGCAGCCTCAGTCCAATCCAAAACCCACGACAAGATCCTCACCGTCTGTGGCAACGG CTTGGGTACCTCCCTCTTCCTCAAAAACACCCTTGAGCAAGTTTTCGACACCTGGGGTTGGGGTCCATACATGACGGTGG AGGCAACCGACACTATCTCCGCCAAGGGCAAAGCCAAGGAAGCTGATCTCATCATGACCTCTGGTGAAATCGCCCGCACG TTGGGTGATGTTGGAATCCCGGTTCACGTGATCAATGACTTCACGAGCACCGATGAAATCGATGCTGCGCTTCGTGAACG CTACGACATCTAA
Upstream 100 bases:
>100_bases GGAACTTCGAGGTGTCTTCGTGGGGCGTACGGAGATCTAGCAAGTGTGGCTTTATGTTTGACCCTATCCGAATCAACATG CAGTGAATTAACATCTACTT
Downstream 100 bases:
>100_bases CTACTTTAAAAGGACGAAAATATTATGGACTGGTTAACCATTCCTCTTTTCCTCGTTAATGAAATCCTTGCGGTTCCGGC TTTCCTCATCGGTATCATCA
Product: hypothetical protein
Products: Protein Histidine; Sugar Phosphate. [C]
Alternate protein names: PTS system ascorbate-specific EIIA component [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MFVLKDLLKAERIELDRTVTDWREGIRAAGVLLEKTNSIDSAYTDAMIASVEEKGPYIVVAPGFAFAHARPSRAVRETAM SWVRLASPVSFGHSKNDPVNLIVALAAKDATAHTQAMAALAKALGKYRKDLDEAQSPEEIQAILEKAAAPAKQKAPAVAP AVTPTDAPAASVQSKTHDKILTVCGNGLGTSLFLKNTLEQVFDTWGWGPYMTVEATDTISAKGKAKEADLIMTSGEIART LGDVGIPVHVINDFTSTDEIDAALRERYDI
Sequences:
>Translated_270_residues MFVLKDLLKAERIELDRTVTDWREGIRAAGVLLEKTNSIDSAYTDAMIASVEEKGPYIVVAPGFAFAHARPSRAVRETAM SWVRLASPVSFGHSKNDPVNLIVALAAKDATAHTQAMAALAKALGKYRKDLDEAQSPEEIQAILEKAAAPAKQKAPAVAP AVTPTDAPAASVQSKTHDKILTVCGNGLGTSLFLKNTLEQVFDTWGWGPYMTVEATDTISAKGKAKEADLIMTSGEIART LGDVGIPVHVINDFTSTDEIDAALRERYDI >Mature_270_residues MFVLKDLLKAERIELDRTVTDWREGIRAAGVLLEKTNSIDSAYTDAMIASVEEKGPYIVVAPGFAFAHARPSRAVRETAM SWVRLASPVSFGHSKNDPVNLIVALAAKDATAHTQAMAALAKALGKYRKDLDEAQSPEEIQAILEKAAAPAKQKAPAVAP AVTPTDAPAASVQSKTHDKILTVCGNGLGTSLFLKNTLEQVFDTWGWGPYMTVEATDTISAKGKAKEADLIMTSGEIART LGDVGIPVHVINDFTSTDEIDAALRERYDI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI2367359, Length=143, Percent_Identity=31.4685314685315, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1790755, Length=101, Percent_Identity=34.6534653465347, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789302, Length=116, Percent_Identity=34.4827586206897, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 [H]
Pfam domain/function: PF00359 PTS_EIIA_2 [H]
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 28975; Mature: 28975
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLKDLLKAERIELDRTVTDWREGIRAAGVLLEKTNSIDSAYTDAMIASVEEKGPYIVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEE APGFAFAHARPSRAVRETAMSWVRLASPVSFGHSKNDPVNLIVALAAKDATAHTQAMAAL ECCCHHHHCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHH AKALGKYRKDLDEAQSPEEIQAILEKAAAPAKQKAPAVAPAVTPTDAPAASVQSKTHDKI HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LTVCGNGLGTSLFLKNTLEQVFDTWGWGPYMTVEATDTISAKGKAKEADLIMTSGEIART HHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECHHHHHH LGDVGIPVHVINDFTSTDEIDAALRERYDI HHCCCCCEEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MFVLKDLLKAERIELDRTVTDWREGIRAAGVLLEKTNSIDSAYTDAMIASVEEKGPYIVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEE APGFAFAHARPSRAVRETAMSWVRLASPVSFGHSKNDPVNLIVALAAKDATAHTQAMAAL ECCCHHHHCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHH AKALGKYRKDLDEAQSPEEIQAILEKAAAPAKQKAPAVAPAVTPTDAPAASVQSKTHDKI HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LTVCGNGLGTSLFLKNTLEQVFDTWGWGPYMTVEATDTISAKGKAKEADLIMTSGEIART HHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECHHHHHH LGDVGIPVHVINDFTSTDEIDAALRERYDI HHCCCCCEEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein N-Phosphohistidine; Sugar [C]
Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]