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The map label for this gene is dadA [H]

Identifier: 62391860

GI number: 62391860

Start: 3187239

End: 3188471

Strand: Reverse

Name: dadA [H]

Synonym: cg3340

Alternate gene names: 62391860

Gene position: 3188471-3187239 (Counterclockwise)

Preceding gene: 62391861

Following gene: 62391858

Centisome position: 97.13

GC content: 57.1

Gene sequence:

>1233_bases
ATGAGTTCGTCTGGAAAAGTCATTGTTGTTGGAGCCGGCATAGTGGGTCTTGCCACCGCCTGGCATTTACAGGAGCACGG
GTTCGAGGTGAGCGTCCTTGATCGGGATGGTGTCGCTGCAGGTTCTTCGTGGGGTAATGCTGGTTGGTTAGCGCCGGCGA
AAACTATTCCGTTGTCGGAGCCGGGGCTGTGGACGTATGGTCCGAAAGAGCTGTTCAATCCGGTGTCGCCGATGCATATG
CCACTTCGTGTGGATCCCAAACTGTGGCTTTTCTTGGCGCAATTTATGGCGCAGGCTTTTCAACGCAAGTGGGATTCCAC
GATGGCGGACCTCACGGAGATCGATAAGGTCGCGCTCGAAGCTTTTGATGAACTGTCGATCGGTGGCGTGGAAGGCCTCA
CCCATGAAGGTCCATTTGTTATTGGTTTTGAGGAAGAGCGCCAATCGGCGGGTTTCCGTAAGGAAATTGATGGCGTGAGC
AGGCACGGCCAGAAAGTGGAGATGTCTCGACTGGAGAATCCACAAGAGTTGGCGCCGATGCTGAATGAGCAAATTCAGGT
GGCTTACCGTTTGGAAGGCCAGCGTTTCATCGAGCCGGGTCCATACGTGCAGTCATTGGCGGATGCTGTGGTGAAGCGTG
GTGGCGTGATCCGCGCCGGGGCAGAAGTTGTGCATGTGGCGAAGGGTGATCGTCCCGCGGTCATTTTGGCGGATGGTAGC
CGTGAAGAAGCGGACAAGGTGGTTGTGGCAACGGGTGCCTGGCTGCCGGGTCTAACGCGTGAATACGGTGTGAAAACTCT
TGTTCAGGCTGGTCGTGGCTATTCCTTCTCTGTGGCAACGGATATTCCTGCCAAGCATTCTGTGTACCTTCCCCACCACC
GCATGGCCTGCACGCCGTATGAGGGCCGTTTCCGCATTGCGGGCACCATGGAGTTCCGCGGTCCGGATGAGCCGTTCCAG
CAGGGCCGGGTGGATGCGATTGTTTCGCAGGCGAAGAAGGTTATGAGAGGTATTGATTTCAACGATCGTCAGGATGAGTG
GGTGGGTTCCCGCCCGGTCACTCCGGATGGGCGTCCGTTGATTGGGCAGACCAAGGCGGAGAACATTTACGTTGCCGGTG
GTCACGGCATGTGGGGTGTGGTGCTGGGCCCTGCCACCGGTAAGTATTTGGCGGAGCTGATGGCTACGGGCAACACCAAC
CCGATCATCAAGCCGTTCGATCCGCTGCGTTAA

Upstream 100 bases:

>100_bases
CAAGAAATAACCCCATAGGAATTTCCAAACCAATACATTTAAGTACGAACTCATGAATACTGGGGGCACTAGGAGTCCAC
CCCACCCTCAGGAGGGTTTC

Downstream 100 bases:

>100_bases
CTGCCCAATAATTGGTTGAAGATCTCCGAGGTGGCGGGGTGGGTGTAGATGCCGTCGCCAAGCTCGGAGGCGGTGACGCC
ATGCCGCATGGCAAGCGCCA

Product: D-amino acid dehydrogenase (deaminating)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSSSGKVIVVGAGIVGLATAWHLQEHGFEVSVLDRDGVAAGSSWGNAGWLAPAKTIPLSEPGLWTYGPKELFNPVSPMHM
PLRVDPKLWLFLAQFMAQAFQRKWDSTMADLTEIDKVALEAFDELSIGGVEGLTHEGPFVIGFEEERQSAGFRKEIDGVS
RHGQKVEMSRLENPQELAPMLNEQIQVAYRLEGQRFIEPGPYVQSLADAVVKRGGVIRAGAEVVHVAKGDRPAVILADGS
REEADKVVVATGAWLPGLTREYGVKTLVQAGRGYSFSVATDIPAKHSVYLPHHRMACTPYEGRFRIAGTMEFRGPDEPFQ
QGRVDAIVSQAKKVMRGIDFNDRQDEWVGSRPVTPDGRPLIGQTKAENIYVAGGHGMWGVVLGPATGKYLAELMATGNTN
PIIKPFDPLR

Sequences:

>Translated_410_residues
MSSSGKVIVVGAGIVGLATAWHLQEHGFEVSVLDRDGVAAGSSWGNAGWLAPAKTIPLSEPGLWTYGPKELFNPVSPMHM
PLRVDPKLWLFLAQFMAQAFQRKWDSTMADLTEIDKVALEAFDELSIGGVEGLTHEGPFVIGFEEERQSAGFRKEIDGVS
RHGQKVEMSRLENPQELAPMLNEQIQVAYRLEGQRFIEPGPYVQSLADAVVKRGGVIRAGAEVVHVAKGDRPAVILADGS
REEADKVVVATGAWLPGLTREYGVKTLVQAGRGYSFSVATDIPAKHSVYLPHHRMACTPYEGRFRIAGTMEFRGPDEPFQ
QGRVDAIVSQAKKVMRGIDFNDRQDEWVGSRPVTPDGRPLIGQTKAENIYVAGGHGMWGVVLGPATGKYLAELMATGNTN
PIIKPFDPLR
>Mature_409_residues
SSSGKVIVVGAGIVGLATAWHLQEHGFEVSVLDRDGVAAGSSWGNAGWLAPAKTIPLSEPGLWTYGPKELFNPVSPMHMP
LRVDPKLWLFLAQFMAQAFQRKWDSTMADLTEIDKVALEAFDELSIGGVEGLTHEGPFVIGFEEERQSAGFRKEIDGVSR
HGQKVEMSRLENPQELAPMLNEQIQVAYRLEGQRFIEPGPYVQSLADAVVKRGGVIRAGAEVVHVAKGDRPAVILADGSR
EEADKVVVATGAWLPGLTREYGVKTLVQAGRGYSFSVATDIPAKHSVYLPHHRMACTPYEGRFRIAGTMEFRGPDEPFQQ
GRVDAIVSQAKKVMRGIDFNDRQDEWVGSRPVTPDGRPLIGQTKAENIYVAGGHGMWGVVLGPATGKYLAELMATGNTNP
IIKPFDPLR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=426, Percent_Identity=27.6995305164319, Blast_Score=115, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44707; Mature: 44575

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSGKVIVVGAGIVGLATAWHLQEHGFEVSVLDRDGVAAGSSWGNAGWLAPAKTIPLSE
CCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PGLWTYGPKELFNPVSPMHMPLRVDPKLWLFLAQFMAQAFQRKWDSTMADLTEIDKVALE
CCCCCCCHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFDELSIGGVEGLTHEGPFVIGFEEERQSAGFRKEIDGVSRHGQKVEMSRLENPQELAPM
HHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCEEEHHHCCCHHHHHHH
LNEQIQVAYRLEGQRFIEPGPYVQSLADAVVKRGGVIRAGAEVVHVAKGDRPAVILADGS
HHHHEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCEEEEECCC
REEADKVVVATGAWLPGLTREYGVKTLVQAGRGYSFSVATDIPAKHSVYLPHHRMACTPY
CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCEEECCC
EGRFRIAGTMEFRGPDEPFQQGRVDAIVSQAKKVMRGIDFNDRQDEWVGSRPVTPDGRPL
CCCEEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
IGQTKAENIYVAGGHGMWGVVLGPATGKYLAELMATGNTNPIIKPFDPLR
CCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSSGKVIVVGAGIVGLATAWHLQEHGFEVSVLDRDGVAAGSSWGNAGWLAPAKTIPLSE
CCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PGLWTYGPKELFNPVSPMHMPLRVDPKLWLFLAQFMAQAFQRKWDSTMADLTEIDKVALE
CCCCCCCHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFDELSIGGVEGLTHEGPFVIGFEEERQSAGFRKEIDGVSRHGQKVEMSRLENPQELAPM
HHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCCEEEHHHCCCHHHHHHH
LNEQIQVAYRLEGQRFIEPGPYVQSLADAVVKRGGVIRAGAEVVHVAKGDRPAVILADGS
HHHHEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCEEEEECCC
REEADKVVVATGAWLPGLTREYGVKTLVQAGRGYSFSVATDIPAKHSVYLPHHRMACTPY
CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCEEECCC
EGRFRIAGTMEFRGPDEPFQQGRVDAIVSQAKKVMRGIDFNDRQDEWVGSRPVTPDGRPL
CCCEEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
IGQTKAENIYVAGGHGMWGVVLGPATGKYLAELMATGNTNPIIKPFDPLR
CCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]