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The map label for this gene is ssb

Identifier: 62391829

GI number: 62391829

Start: 3157291

End: 3157968

Strand: Reverse

Name: ssb

Synonym: cg3307

Alternate gene names: 62391829

Gene position: 3157968-3157291 (Counterclockwise)

Preceding gene: 62391830

Following gene: 62391828

Centisome position: 96.2

GC content: 57.52

Gene sequence:

>678_bases
ATGGCAATCGGAGATACTAACATCACCGTCGTTGGCAACATTGTTGCTGACCCGGAACTCCGCTTCACCCCATCGGGTGC
AGCAGTGGCTAACTTCCGCATTGCATCAACTCCCCGCTCGTTCAACCGCCAAACCAACCAGTGGGAAGACGGCGAAGCCC
TCTTTCTCACCGTTAACGTTTGGCGTCAGGCAGCTGAAAACGTTGCAGAGTCCCTGTCCAAGGGTATGCGCGTTATCGTC
ACCGGTCGCCTCAAGCAGCGCTCCTATGAAACCCGTGAGGGCGAAAAGCGCAGCGTTTTTGAGGTCGAAGCGGATGAAGT
CGGACCATCACTAACATTTGCCAAGGCAGATGTCCAGCGCACACCGCGCGGTGGAAACTCTGGCGGAAACTACGGTGGCG
GCAACCAAGGTGGTGGCCTCGGTGGAAACCAAGGCAACCAGCAAGGTGGATTCAGCAACCAGAACTCTGGCGGCTTCGGT
GGAAACCAAGGCAACCAGCAGCAAAGCAACCAGGGCGGATTTGGTGGAAACCAAAACCAGTCCCAGGGTAACAACTTCAA
CCAAGGTGGATTTGGCGGAGGCAGCCCACAGGCAGCACCGGACAATGACCCTTGGAATTCTGCACCACCAGCTGGCTCCG
GCGGGTTCGGCGGCGCAGACGATGAGCCACCGTTCTAA

Upstream 100 bases:

>100_bases
CGATCGTGTTCTGAACCTGAATGATGGTGTCCTGCGCACCAAGGTTCTGCGACTCGACAAGTAAAGAACTTTAAGGCTCT
AGAGAGGTAGTTGAAGGATT

Downstream 100 bases:

>100_bases
AGCTTTTCTTTTCTAAAACATTCACAAACACTCAAAAACCACGAAAGGCAGGGATCATGAAGCTGATCCTCACCGCCGCC
GTTGAAAACCTTGGTGTCGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MAIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNVWRQAAENVAESLSKGMRVIV
TGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQRTPRGGNSGGNYGGGNQGGGLGGNQGNQQGGFSNQNSGGFG
GNQGNQQQSNQGGFGGNQNQSQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF

Sequences:

>Translated_225_residues
MAIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNVWRQAAENVAESLSKGMRVIV
TGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQRTPRGGNSGGNYGGGNQGGGLGGNQGNQQGGFSNQNSGGFG
GNQGNQQQSNQGGFGGNQNQSQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF
>Mature_224_residues
AIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNVWRQAAENVAESLSKGMRVIVT
GRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQRTPRGGNSGGNYGGGNQGGGLGGNQGNQQGGFSNQNSGGFGG
NQGNQQQSNQGGFGGNQNQSQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSB_CORGL (Q8NLG0)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927157
- RefSeq:   NP_602177.1
- RefSeq:   YP_227231.1
- ProteinModelPortal:   Q8NLG0
- SMR:   Q8NLG0
- World-2DPAGE:   0001:Q8NLG0
- PRIDE:   Q8NLG0
- GeneID:   1020924
- GeneID:   3343967
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg3307
- KEGG:   cgl:NCgl2880
- HOGENOM:   HBG755544
- OMA:   IATSENW
- ProtClustDB:   PRK07772
- BioCyc:   CGLU196627:CG3307-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 23301; Mature: 23170

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNV
CCCCCCCEEEEEEEEECCCEEECCCCCEEEEEEEECCCHHHCCCCCCCCCCCEEEEEHHH
WRQAAENVAESLSKGMRVIVTGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQR
HHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCEEEEEHHHCCCCEEEEHHHHHH
TPRGGNSGGNYGGGNQGGGLGGNQGNQQGGFSNQNSGGFGGNQGNQQQSNQGGFGGNQNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNV
CCCCCCEEEEEEEEECCCEEECCCCCEEEEEEEECCCHHHCCCCCCCCCCCEEEEEHHH
WRQAAENVAESLSKGMRVIVTGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQR
HHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCEEEEEHHHCCCCEEEEHHHHHH
TPRGGNSGGNYGGGNQGGGLGGNQGNQQGGFSNQNSGGFGGNQGNQQQSNQGGFGGNQNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626